Tyan045708.2
Basic Information
- Insect
- Topomyia yanbarensis
- Gene Symbol
- kn
- Assembly
- GCA_030247195.1
- Location
- CM058070.1:39209925-39214077[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-118 4.3e-114 384.0 0.0 205 385 1 208 1 212 0.99 2 2 1.6e-09 4e-05 24.2 17.4 422 535 211 320 208 332 0.65
Sequence Information
- Coding Sequence
- ATGCGACGATTTCAAGTAGTGATAGCGACCCAGGTCGCCGTGGACGGACCGCTGCTGGCGATCTCCGACAATATGTTCGTGCACAACAACAGCAAGCACGGGCGCCGGGCGAAACGGCTCGACCCCGAAGGTACGGGAGGTTCTCCGTTGGCTATTTCGGGCCATCCACTGGCACCGGACAGTACGTACGACGGCATCTATCCGCCGCTACCTATGGCAACCCCCTGCATCAAGGCGATATCTCCCAGTGAAGGCTGGACGACTGGGGGAGCGCAGGTAATCATCGTGGGCGATAACTTCTTCGACGGACTACAGGTGGTTTTCGGCACGATGCTCGTGTGGAGTGAGTTGATAACATCGCATGCAATCCGAGTACAGACTCCCCCACGACACATACCGGGCGTGGTGGAGGTTACGTTATCCTACAAGAGCAAGCAATTCTGTAAGGGATCTCCAGGACGATTTGTCTATGTCTCTCTGAGTGAGCCTACCATCGACTACGGTTTCCAGCGGTTACAGAAATTAATTCCTCGGCATCCCGGTGATCCTGACAAGCTCCCCAAGGAGATAATCCTGAAGCGGGCGGCAGACCTAGCGGAAGCCCTGTACTCAATGCCACGTTCACCGAATGGCTCCTCAGGGTTTAATTCCTACACTGGCCAGCTGGCGGTCAGCGTTCAAGACGGCACCGGACAATGGGCTGAAGATGAGTACACCCGAGCGCAAAGTAGTAGTGTTAGTCCCCGGGGAGGTTACTGCAGTAGTGCTTCCACACCACACTCCTCCGGAGGCGGCTCGTATGGAAGCAGTAATGGCTACGCGACTGCTTCCAACATGAGCGGACTAACCTCTTCCCCTGCCAGTGTCTTCAATTCCTCGTCGATTACATCGACGCCGAATCTCTGGCACTCGCAGCTGGTACCATCACACAGCTATTCGGCCACCGGTGCACACCAGTTCTGGCATGCTTCGTCATCGTCTGTAGCGACAGCGGTTTAG
- Protein Sequence
- MRRFQVVIATQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPEGTGGSPLAISGHPLAPDSTYDGIYPPLPMATPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLSEPTIDYGFQRLQKLIPRHPGDPDKLPKEIILKRAADLAEALYSMPRSPNGSSGFNSYTGQLAVSVQDGTGQWAEDEYTRAQSSSVSPRGGYCSSASTPHSSGGGSYGSSNGYATASNMSGLTSSPASVFNSSSITSTPNLWHSQLVPSHSYSATGAHQFWHASSSSVATAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00099431;
- 90% Identity
- iTF_00105631;
- 80% Identity
- -