Tcin020457.1
Basic Information
- Insect
- Tolmerus cingulatus
- Gene Symbol
- TY3B-I
- Assembly
- GCA_959613345.1
- Location
- OY390708.1:32297297-32307170[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.1 20 7.3 0.0 4 23 1015 1034 1015 1034 0.96 2 11 0.012 2.3 10.2 0.3 1 23 1040 1063 1040 1063 0.97 3 11 8.8e-05 0.017 16.9 1.4 1 23 1088 1110 1088 1110 0.95 4 11 8.6e-05 0.017 16.9 0.9 1 23 1116 1138 1116 1138 0.96 5 11 0.76 1.5e+02 4.5 0.1 1 23 1144 1164 1144 1164 0.76 6 11 0.66 1.3e+02 4.7 0.2 2 10 1241 1249 1240 1254 0.88 7 11 1.3e-05 0.0026 19.5 1.2 1 23 1265 1287 1265 1287 0.96 8 11 0.0027 0.53 12.2 1.1 5 23 1345 1363 1344 1363 0.94 9 11 0.00044 0.087 14.7 7.0 1 23 1369 1392 1369 1392 0.97 10 11 0.0029 0.56 12.1 0.9 1 23 1894 1916 1894 1916 0.98 11 11 4.7e-06 0.00091 20.9 2.5 1 23 1922 1944 1922 1944 0.99
Sequence Information
- Coding Sequence
- ATGACCAAAGCACGTGTAGACAAATTTACCCAAAATGCAACGGTTCCGAgtctgaaagaaaaattagaagcTTTTGGGTTAAGCACGGCTGGTGCAAAAACCGTCTTGAAATTAAGGCTTGAGGAGAAAATTAGTAGGCTTACGGATGCTGAGCTTGAGGAGCATTTTCGTGGTGATATCTTGGCACCACCTAATGAAAACGACGAGGGTGGCAGCGAGGAGTCCTTAGCGGAGCCTACATTACAACCAGAATTAGGCGAAAGTTCACCGAGATCTGCAACGGGCAACTTGCAAGAAACTATAGATGAGCTGAATGATATGATTAAGAAGCaggaagaaattttagaattaaaaaaaaagttggtAACTTTACAGTCTGCTAATCTGGAAACAAAGGGGggtgatattttatttagagacATCGAGGAGTCGTTGCCTACATTTACTGGCGACGATAATTATTCAATAAAGAATTGGGTCAGGAGTTTCGAGGAGGCCCGGTATCTTCATGGTTGGAGTGATCAGCAATCATACATTTACTCTAGAAGGTTACTTGGAGGAACGGCAAAGCTATTTTTAAGATCATCGGCTTGCAGAACATGGAACGAACTGAAGGCTTCTTTAATGGAAGAATTCCATCACGGAATCACACCGGCCGAGGCACACAATGCTTTGAGGAACCGAAAGAAACGTAGGGATGAAAGCACACACCAATATGTCCTCAATATGCAAGAAATCGCCTCACTTGCCAATATTGAGGAGGAGGACCTCATGAATTACATTATTAAAGGTATTCCTGATTCGCTTTCGAATAAACAATTACTATTTACAGCAAGAAATATTGGCGAGCTAAAGCGAATTATTAGGAAATACGATAAAATGCGAGACATCCCTACAGAAATGTCAGTAAATAACCCAACTCAATCATACTCAAAAGATTCGCGGCAACAAAATAGAGTTCCTAACAACACATCGGCGAAGTATAAATGCTTCAACTGTAACGAGATGGGTCACGTAGTATCCAACTGCCCGAAACCCCGAAGGGAAAGGGGAACATGCTTCAGTTGTGGAAATCATGGACACTCTGCATCAAATTGTAACCAGCGTCGAAAGCCTGCAACATCATCAACATCGAAATCTTCTTCGGCGGCTGTGATGTTACTACAAGACGACGCTTCTCCGGAAACTACGACCGAAAACGGAACATCAGGAAGCATGGAACATAAATCTGTAAACATTTCTAACGATTTCTGTTATACTTTTAGTTATTCGTTTATCAGCCAAACAGCACAAGATGTCGCAACCATTTTTGAGACAAACACCATGATCGACACAGGCAGCCCGATAAGCTTCATCCGAGAGTGTTATGTTCTCCCCTACCTCATCTCGTCAGTGGAACCCGAATCTGCAAAATTCGTCGGCATCAATGATAGTCATCTAGTAGTATTAGGCAAGgAACTTGTCGACTCCGGAAAGCTTCTGGTGTATATCGACGATCTACTCATTGCCTCCGAGACCAAAGAAGAACACTTCCAAATCTTAGGTGAAGTCTTAAAAATCGTAGAGGAAAATAACCTGAAACTTAGACTTGATAAATGTCTGTTTATGCAGGAAAAAATAACATACCTTGGATATGAAGTTAGTGCTAAGGGTGTAGGACCCAATTTAGCGGGTTTACGCAGTGTTCAAGAATTTCCCGTACCCAAAAACGGCAAGGAACTGCATTCATTCCTCGGTTTATGCTCGTATTTTAGGAAGTTTATCAAAAACTTCTCCTTAATATCTAAGCCACTGTACGatttactgaaaaataatattgaatttaagttCGGGGCAAGTGAGCTGAAGGTCTTTGAGCTTTTGAAAGGTAAATTGCTGGAGGCGCCATTACTCAGTATCTATTCTCCGCACGCAGAAACAGAACTTCACTGCGATGCTAGCAGTTTGGGTTTCGGTGCAATTTTGCTACAGCGACAAGCTGATAATAAATTCTACccggttttctttttttcaaaaagggcGACATCAGCAGAGTCAAGGTATCACTCCTATGAGCTGGAGACTCTTGCTATAATCTATGCTTTAAGACGCTTCCGAATTTACCTCAccggaattaaatttaaaattgtcaccGACTGTAAGTCTTTAACacttactttaaataaaaagctgTTAAACCCTAGAATTTCGCGGTGGGCGTTGGAGCTGCAAGAGTTTGATTATTCGATTGAACATAGAGATTCGGACAGAATGAATCATGTGGACGCGTTGAGCAGATGCCACAATATACTATTGATCGAACCTGAGTCACTTGAGCACGCCCTAGCCGCTGCTCAGCATAAGGACGTAGAAGTACCCTCCGGTAAAAAGGAAGGTGTACTCCATAATATTCCAAAGGGCGATAAGCCGTTTGATACCATACACGTTGACCATTATGGACCGCTCCCCTCAGGTGTTAGAAacctcaaaaaatatattttcctcATAAATGACGGTTTCACAAAATTCGTAAAACTTTATGCTGTTAAGACCACAAGTACTAAAGAAGTCGTCCAATGCGTGCAATCCTACTTCGAAAATTACAGCAAACCGAATAGAATAATATCAGACAGAGGAAGCTGTTTTACGTCCACAGAATTTTCCGATTTTTGTGCTGATAATAATATAGTTCATATTAAAATAGCTACTAATTCCCCGCAATCAAACGGACAGGTTGAGAGGGTAAATAGAGCTCTTACGCCAATGTTGGCAAAGCAGTGTGAAATTGAACCAGCAGATTGGACTAAATACTTGCGTAAAGTCGAGTATGCAATTAATAATACGGTGAACAAAAGTGCTTGTTCAACTCCTAGTATTCTGTTATTTGGTGTTGCTCAAAGGGGAGAAATAACAGATAAAATAAGGGAATATTTGGAAAGTAGCGTAGTAAACGAAGAGCCACGGAATTTAGAAAAGATAAGGGAGGAGgcaaCATATGGCTTTAAACTCGGATCTAGACCTGTTCCCTTGGCTAAACTCTACAGTACCACCCCCGCAGTATCTCCAGAGTGCGGCAGGATGTTTCAGAGGGTCTCCAGTTTCGTCGGACACTTGGAAACCCACGCAGAAAACGACAACTTCAAATGCCAGGCTTGCGGCGAGGAGTTCGAGTTCGAGGAGTACTACGAGAGGCACCTGGAAAAGGATCACAGAGGTGGGGAAATGATGGCAGCTTTGCTCGTTAAAAAGAGAAATTCAAGAGACGTGGGCTACAACGGAAAGTTTGTTTGCAAATCCTGCGGAAAGCGGTTCCCAAAACCTAGTCTTCTGCATAGGCACAAAATAGCTCACGCCAAAGTGAAGCCGTTTGTGtgtCTCGAGTGCAATAAAAGATTTAGCCAGAAAGCATCTCTGGACCGTCACAGTATGCTCCACAGTGGCATCAAGCCGTACGACTGTCCCGAGTGCGGAGTGGGCTTTTCGGAGATTCTCAAGCATATCATGAGTTTGCATGATCAAAATATAAGTCCTCAAACCACTTCCTTAAGCGACCGAGTCACTAAACCTGTGGAAGATCGGATTGTTCCTAAGCGGGTATCAGAGGTTCAGCAGCTTCTTCCAGAATCTCTTCCTGCCCCTGTGAAAGTGCAATTCGTTAACGTTGTGGACCGGCTAAACCCGACTAAGGAAAGGGTTAATCAAACAGTAAAGGAGATTAACATTGATGGAATCAAGTGGCTCGAGTGCCCCTACTGTCCAAAGAGGTTTCAAATGCCCTTTGACATCGTTAGAATTCACAGCAACTATAAACCCTACGCTTGTTCAGTATGCTCCAAAACTTTCAAGAATAATGATAATTTGAGACTGCATAAGACAATACACGAACCGAAGGACCCAGACGGCCAAAAACATAAAGCGCCAGCTTCTTCCTCCCATAATTCAAAATCCAGAAGAGGATCAAAGCGTCCGAATTTACCAATATATTTCTCCACAAAGAGTTCCCTAGGGTTTCATCAAAAAATCCATCTAGGCCAGAAGACTGCACTAGGCGAAGTTTGTCGCAAACAATTTTGTCGGAATAGCGATTTAAAACGACACAAAGCAGTACACAGCAATTTTCGTAATTTCATGTGTCCGCATTGCAAAAAGACGTTCAAAAGAAAGAGTAGTTGTAAGCAGCATATTATAACACTTCATTTGAGAGATGTGCTTACAACAGAAGAAGTAGATTATGATAACATTTCTGATGTTAATGAGGATAGCCGTGGAGAACCACACGAACACCAGGCTCAGCAGGCTCACCAAGATGATAATCAAATAGTATTCAGTGTGGTTCCCATGGATGTTTcatctaatttaaatcaaacagATCAGCTAAAACGGAATCCTAATCTTCCACTTaacttaaatcaaaatgatcaACAAGGCCCGAGTTTTCCTATTCCACCTAATTTAGATCCAGTGAATGAATCAGAggcgatttttctttttccaccGAATTTGAATCAATCAGAAGCAACTGTTCCAGCTCTTGTTCCAAACTTAAACCAAGCAGATGCAAACTTTGGTTTTTCACCCGACATAAATCAATCGGAGGCTGCCTTTCAGATCCCATCCAATTTGAACCAAAGCAATGGACCAGAGGTAGCTTTTCCTGTTTCAGCTGATTTCAACCAAGCCAATCAAACAGCGATGACTCTACTGCCCGCTCCTGCCGatttaaatcaaatgaatgaaataaatccACCGGAATTGGTCTATCCTGTTGAATCCAATTTAAAACCGATTCAAACAGAGGCTGCACTTTCGTTTACACCCGAGTTAAATTTAGCGCATCAAACAGAAGCTAAACTTCCTGTTCCACCCAACCTAAATCAAATGGATAATCCAGAAATAGTGCAAATTACTCAGAACACCCCCAGCGATGTTACTTCACCTCGCCTAATTTTGCTGCTTCAACCAAACCAACCGAATTCTGTGCAGCAAAGGgaggatttaatttttgtcgATCTGAGACAGGTTTTGAATCAAAACTTGTTTCCCCCCAAAAATGTTgagatacaaaataaaataaatcagccAGAAGGAAACAAAGTCGTTTCAGCAGCTGTTCCACAAGAAATTGAAGCACTTCCAGTAGCTACTTcacaaacatttgaattgCTTCAAGAAGCTGCTTCGCCAGAAACTCAATTTCTTCGATCAATTGATTCGcaggaaattcaatttctccCAGTAGCTGCTTCACAAGATATTGGAAGGTTTCCAACAGCTTCTtcaccaaaaattcaaattctgcCAGAAGCAGcttcaaaaaaaattgaaatgctcCCAACTGCTTtgcaagaaaatgaaataattcctACAGCTCCCTCACAGCCCGAATTTATAAGTATAAGCGACTTACCTAATTATAGCAAAAATTTAGCTAAAAACATAGTCGTCGTACCACATGAAAAAAATCCTGATAGTTACGATAACCTACctgaagcaattttaaatgattctgAGCCCCAGGGAGAAGAGTTCCTTATTCAGGAAGCAGGTGCTAAATTAGCAGAGCTGACCATGACGAAAGCCCCTAAGCGAAGCCTCCGCACCCCTGTTCAATATGCAAAAAAGTTTTCCAAAAGCCGAGCGATTTACTTAAAGTCCACTCTGGACAATCACAAGTTCATTCATGATAAGGACAGGCCCAGCTTTGTATGCCACGCTTGCGGCAAAAATTATGCTGCTAAAAATGTCCTGCGCACTCATCTGCGGATGCACACCGGGGAGAGGCCATTTAAGTGTGATATCTGCTCGAAAACCTTCAGGACGTCCGGACATAGAACGGCTCATATTCGAGTGCATGCGAAGATGGAAGCTAcgagaaagaaaaagaagactAAACTGTAA
- Protein Sequence
- MTKARVDKFTQNATVPSLKEKLEAFGLSTAGAKTVLKLRLEEKISRLTDAELEEHFRGDILAPPNENDEGGSEESLAEPTLQPELGESSPRSATGNLQETIDELNDMIKKQEEILELKKKLVTLQSANLETKGGDILFRDIEESLPTFTGDDNYSIKNWVRSFEEARYLHGWSDQQSYIYSRRLLGGTAKLFLRSSACRTWNELKASLMEEFHHGITPAEAHNALRNRKKRRDESTHQYVLNMQEIASLANIEEEDLMNYIIKGIPDSLSNKQLLFTARNIGELKRIIRKYDKMRDIPTEMSVNNPTQSYSKDSRQQNRVPNNTSAKYKCFNCNEMGHVVSNCPKPRRERGTCFSCGNHGHSASNCNQRRKPATSSTSKSSSAAVMLLQDDASPETTTENGTSGSMEHKSVNISNDFCYTFSYSFISQTAQDVATIFETNTMIDTGSPISFIRECYVLPYLISSVEPESAKFVGINDSHLVVLGKELVDSGKLLVYIDDLLIASETKEEHFQILGEVLKIVEENNLKLRLDKCLFMQEKITYLGYEVSAKGVGPNLAGLRSVQEFPVPKNGKELHSFLGLCSYFRKFIKNFSLISKPLYDLLKNNIEFKFGASELKVFELLKGKLLEAPLLSIYSPHAETELHCDASSLGFGAILLQRQADNKFYPVFFFSKRATSAESRYHSYELETLAIIYALRRFRIYLTGIKFKIVTDCKSLTLTLNKKLLNPRISRWALELQEFDYSIEHRDSDRMNHVDALSRCHNILLIEPESLEHALAAAQHKDVEVPSGKKEGVLHNIPKGDKPFDTIHVDHYGPLPSGVRNLKKYIFLINDGFTKFVKLYAVKTTSTKEVVQCVQSYFENYSKPNRIISDRGSCFTSTEFSDFCADNNIVHIKIATNSPQSNGQVERVNRALTPMLAKQCEIEPADWTKYLRKVEYAINNTVNKSACSTPSILLFGVAQRGEITDKIREYLESSVVNEEPRNLEKIREEATYGFKLGSRPVPLAKLYSTTPAVSPECGRMFQRVSSFVGHLETHAENDNFKCQACGEEFEFEEYYERHLEKDHRGGEMMAALLVKKRNSRDVGYNGKFVCKSCGKRFPKPSLLHRHKIAHAKVKPFVCLECNKRFSQKASLDRHSMLHSGIKPYDCPECGVGFSEILKHIMSLHDQNISPQTTSLSDRVTKPVEDRIVPKRVSEVQQLLPESLPAPVKVQFVNVVDRLNPTKERVNQTVKEINIDGIKWLECPYCPKRFQMPFDIVRIHSNYKPYACSVCSKTFKNNDNLRLHKTIHEPKDPDGQKHKAPASSSHNSKSRRGSKRPNLPIYFSTKSSLGFHQKIHLGQKTALGEVCRKQFCRNSDLKRHKAVHSNFRNFMCPHCKKTFKRKSSCKQHIITLHLRDVLTTEEVDYDNISDVNEDSRGEPHEHQAQQAHQDDNQIVFSVVPMDVSSNLNQTDQLKRNPNLPLNLNQNDQQGPSFPIPPNLDPVNESEAIFLFPPNLNQSEATVPALVPNLNQADANFGFSPDINQSEAAFQIPSNLNQSNGPEVAFPVSADFNQANQTAMTLLPAPADLNQMNEINPPELVYPVESNLKPIQTEAALSFTPELNLAHQTEAKLPVPPNLNQMDNPEIVQITQNTPSDVTSPRLILLLQPNQPNSVQQREDLIFVDLRQVLNQNLFPPKNVEIQNKINQPEGNKVVSAAVPQEIEALPVATSQTFELLQEAASPETQFLRSIDSQEIQFLPVAASQDIGRFPTASSPKIQILPEAASKKIEMLPTALQENEIIPTAPSQPEFISISDLPNYSKNLAKNIVVVPHEKNPDSYDNLPEAILNDSEPQGEEFLIQEAGAKLAELTMTKAPKRSLRTPVQYAKKFSKSRAIYLKSTLDNHKFIHDKDRPSFVCHACGKNYAAKNVLRTHLRMHTGERPFKCDICSKTFRTSGHRTAHIRVHAKMEATRKKKKTKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -