Basic Information

Insect: Tolmerus cingulatus
Gene Symbol: -
Assembly: GCA_959613345.1
Location: OY390709.1:34058008-34075292[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.067 13 7.8 0.1 3 19 250 266 248 271 0.89

2 9 6.2e-05 0.012 17.4 0.1 3 23 308 329 308 329 0.96

3 9 5.5e-05 0.011 17.5 1.4 2 20 341 359 340 362 0.92

4 9 7.1e-07 0.00014 23.5 0.4 1 23 371 393 371 393 0.97

5 9 7e-07 0.00014 23.5 0.1 1 23 399 421 399 421 0.98

6 9 1.7e-06 0.00034 22.3 0.5 1 23 427 449 427 449 0.98

7 9 3.4e-07 6.7e-05 24.5 0.8 1 23 455 477 455 477 0.99

8 9 0.005 0.97 11.4 6.0 1 23 483 505 483 505 0.97

9 9 8.1e-05 0.016 17.0 5.7 1 23 511 534 511 534 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.067	13	7.8	0.1	3	19	250	266	248	271	0.89
2	9	6.2e-05	0.012	17.4	0.1	3	23	308	329	308	329	0.96
3	9	5.5e-05	0.011	17.5	1.4	2	20	341	359	340	362	0.92
4	9	7.1e-07	0.00014	23.5	0.4	1	23	371	393	371	393	0.97
5	9	7e-07	0.00014	23.5	0.1	1	23	399	421	399	421	0.98
6	9	1.7e-06	0.00034	22.3	0.5	1	23	427	449	427	449	0.98
7	9	3.4e-07	6.7e-05	24.5	0.8	1	23	455	477	455	477	0.99
8	9	0.005	0.97	11.4	6.0	1	23	483	505	483	505	0.97
9	9	8.1e-05	0.016	17.0	5.7	1	23	511	534	511	534	0.98

Sequence Information

Coding Sequence: ATGGCCCTAATTTGCAGGCTCTGTGCAGCCTTGAGGAAAGTGGAGAATTTCGTAAACCTGTCCGATCCATGCATGAATCTTCCAGCTAAAATCGAGATGTGTTGTCAGCTGTGCATCCTCGAGGACGAGACGATGCCCCAGACGGTCTGCAGTGATTGCGTCCAGCAGCTCGACGagtgtttcaaatttataacGAAAGTCCACGAAGCCCAGGACTCGCTGGCCAAAATTTTTCATGCTGAGAACTCATCCTCCCGACAGGCGAATCGCGTCCATCAGTCCCTGGCTGACAAGATCAAGGGGGCCGTTGCGAACGCGGGGCCCAACCCGGAACAGTGCGTTGCGGTTGACGAGAAGCCGCGCTTGAAGGTGGCGAAGTATGCGGATGCTGATCGGGATGCGGATATTTGGCGAAAGGATGTCAAGGTGAGGGTAGTACAAATAGTTCGGGACGATTCGCTGAATGATTCGAACGATGGACGGCAACAGAACATGAAAACCGAAATCGAAGAGGATGAGGATGACGAGGAAATCTTCGAAATAGAAGAAGTCCATATTGAAGATGGACATGACAGCGATCAAATGTCCGAAGAAGAGGTGATTATCGTACAGAATGTATTTGAGGAAAGACAAGACCAGGACCAAGATCACGAAACTGAGTCCTTTGAAGTCCGTGCTATCGATGAAGTTCCTCCTGAAGATAAAACGATCGAGgaTAAGGAAACTTGGCTGTCCTACCCATGGATTTGCGTTACCTGCTCAATGGCATTCTCCTCTCCTCTGGAGCTCAAGAATCACTCGGTGGCAAAGCACAAAGGTGCAATTAAATACACCTGCGCCGACTGCTGCAAGACCATGGACAAGTATTACGCGTTCATCAATCATGTAAAACTGCGCCACCGAGATTATCTTATGCTGGGCTGCGACATTTGCGGGGAGGTTTTCAGCAATTACAACGATTTGGTAAAGCATAGGGGCACGGAGCACCTGGAGCAAAGCGAAAAAATCGCGACTTTGGTCATGTGCAAGGAATGCGGAAAGGCCTTCAAGAACTTGAGTGCTCTCCAGGTCCATTCCAAGTGCCACCAGCCGGATGATGTTAAGTACAGATTCGCTTGCAATGTGTGCGACAAGAAATTTGGATCCAAACCGAACTTGAAGGCGCATCAGAAAATTCATGCTGGTCTCAAAGAATTCGTTTGCGACCAGTGCGGAAAGGGTTTTGTTCAGAAAGCTAACTTGGAAGAGCATTTACTCATCCACGTTAATGATTCTCCCTATTCTTGCACAGAATGCGACAAAAGCTTCAAAACGCCTGCAAGACTAGCAAAGCACAAATTGGTGCACACTGGGATTAAGCCGTTCAAGTGCGAAGATTGTGGGCGGGAATTTCGGGAAAAGGATACGCTCAAGGTGCACACACGGATCCACACGGGCGCAATGCCGTACGAATGTGAATTTTGTAGGAAGCGGTTTCGGTTCAAAAGCGTCTTAACGACCCATCGACATCAGCATACAGGAGAACGTCCGTACTCGTGCCTGGAATGCAATCACCACTTCACAAATTGGCCAAACTACAACAAGCACATGAAACGACGTCATGGTATCAACAAGAGCTCGACGAGTCGGAAGCAGCAAAGGACCCCACCCAAAGTAGTTCTACCGAATGTGAAAGTGAAGGCCGAGATGTCATCTGGTCCTGATTCGTCTTCCGATTTGGTCACGTCAACAGCGGAAATCCCCAATTTGGTATCCGACGACGATATAGCCGCTGGCGATATTCCTTCACTATAA
Protein Sequence: MALICRLCAALRKVENFVNLSDPCMNLPAKIEMCCQLCILEDETMPQTVCSDCVQQLDECFKFITKVHEAQDSLAKIFHAENSSSRQANRVHQSLADKIKGAVANAGPNPEQCVAVDEKPRLKVAKYADADRDADIWRKDVKVRVVQIVRDDSLNDSNDGRQQNMKTEIEEDEDDEEIFEIEEVHIEDGHDSDQMSEEEVIIVQNVFEERQDQDQDHETESFEVRAIDEVPPEDKTIEDKETWLSYPWICVTCSMAFSSPLELKNHSVAKHKGAIKYTCADCCKTMDKYYAFINHVKLRHRDYLMLGCDICGEVFSNYNDLVKHRGTEHLEQSEKIATLVMCKECGKAFKNLSALQVHSKCHQPDDVKYRFACNVCDKKFGSKPNLKAHQKIHAGLKEFVCDQCGKGFVQKANLEEHLLIHVNDSPYSCTECDKSFKTPARLAKHKLVHTGIKPFKCEDCGREFREKDTLKVHTRIHTGAMPYECEFCRKRFRFKSVLTTHRHQHTGERPYSCLECNHHFTNWPNYNKHMKRRHGINKSSTSRKQQRTPPKVVLPNVKVKAEMSSGPDSSSDLVTSTAEIPNLVSDDDIAAGDIPSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01184017;
90% Identity: -
80% Identity: -