Basic Information

Insect: Tolmerus cingulatus
Gene Symbol: -
Assembly: GCA_959613345.1
Location: OY390710.1:17283168-17285408[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00067 0.13 14.1 5.5 2 23 167 189 166 189 0.95

2 10 0.00027 0.053 15.3 6.3 1 23 217 239 217 239 0.98

3 10 0.023 4.5 9.3 1.9 2 23 246 268 245 268 0.88

4 10 0.0098 1.9 10.4 2.2 1 23 277 299 277 299 0.94

5 10 2.3e-05 0.0044 18.7 4.0 1 23 306 328 306 328 0.99

6 10 5.4e-06 0.0011 20.7 1.7 1 23 334 356 334 356 0.97

7 10 8.2e-07 0.00016 23.3 0.6 2 23 362 383 361 383 0.96

8 10 4.3e-05 0.0085 17.8 1.3 1 23 389 411 389 411 0.97

9 10 4.9e-08 9.7e-06 27.1 0.8 1 23 417 439 417 439 0.97

10 10 0.0004 0.078 14.8 0.2 1 23 444 467 444 467 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00067	0.13	14.1	5.5	2	23	167	189	166	189	0.95
2	10	0.00027	0.053	15.3	6.3	1	23	217	239	217	239	0.98
3	10	0.023	4.5	9.3	1.9	2	23	246	268	245	268	0.88
4	10	0.0098	1.9	10.4	2.2	1	23	277	299	277	299	0.94
5	10	2.3e-05	0.0044	18.7	4.0	1	23	306	328	306	328	0.99
6	10	5.4e-06	0.0011	20.7	1.7	1	23	334	356	334	356	0.97
7	10	8.2e-07	0.00016	23.3	0.6	2	23	362	383	361	383	0.96
8	10	4.3e-05	0.0085	17.8	1.3	1	23	389	411	389	411	0.97
9	10	4.9e-08	9.7e-06	27.1	0.8	1	23	417	439	417	439	0.97
10	10	0.0004	0.078	14.8	0.2	1	23	444	467	444	467	0.94

Sequence Information

Coding Sequence: atgtttgcagATCAGGAATTGTGCAGATTCTGCCTGACTGAGGTAGAAGAACGGTTTCCAGTTCAGGCCTTTATCGATTCAGAAAAAACAATAGCTGACTACTTTAACGACTGCATGAATTTTCCCATCGATTCTAAAGACGAGCTACCACATTCGATTTGCTTGAAATGTTTAGATAAGCTGCTAGACGTGAAACAATTCCGCGCACAATGCATAAAATCGGAGGAGACTTTTAAGGAAAGGATAGCTAAACAATTATATGCACAAGAAACCAAATTAGAGCCTACCGAAGACACCGATAAATATCAGGTGCTCGAAGAAATTTTTGAGGATACGAATCAGTCTGAGGATATCATCGAATTTGAGCCTTTTGAGGGGGCCAACGCAATATCCGAAGAAGAAACATCAACAGAAGAACAGCGCCTCATTATTATTAAGCAACAGGTTCAGACTGGTGCTGAAGAAATAGAATTAGAAGAAGGCGACGATTGCGAACTCAAATGCGAAGAGTGTCATGAGACTTTCAAACACGAAAAGAACTTCAAAATGCACGTGAAACTTTTCCACAATAATGAGTCAAGTCAGAGCTCTGTTCTCGAAAAAGATGAGTCTGAAGACGCAACTGAAACAGTCCCAGTTAAAAAGGAGTACCACTGCCAACAGTGCAATTGGAACTTTCGATTTAAAAGAAACTATGAAACTCACATGAAAAGGCATACTGAGGAGCCATCCGTAAAATGTCTTAAATGCAGCAAATGTTTTGAAACAGACTCGGAtatgtacaaacattttggcATAGCCCACATCGACGCAAGcgataatgaaaatttcctcTGCCCAATATGTGGTATACACCTTAAGTCTAAAAAGAATCTGAATTGTCACCTGGAAATCCATAGCGCAAACAGAAAACAGTACACCTGCGAATTTTGTGATAAACTTTTCTATCGGAAGCACAGCTTGACCAGTCATGTTCGAATTCATACGGGAGAACGTCCCTTTGAATGTGAAATTTGCCATCGACGATTCACCCAAAGGAACGCTCTCGCTACACATATGACTTTGCATACGGGAAAGACAGTTAAATGTCCTCTCTGCGATAAAACATTCAGCAGGCCATCCTTCCTGAAAGTGCACAACAGAGAACACACCAATGAGAGACCCTATGCTTGCGACCTGTGTCCGAAACGCTACCGGCAAATGACACACCTCCGTGCTCATCAAATTAATCATTACGATGCAAGACCTTACGCTTGCCaaatttgtggaaaaagtttttccCAGAAATCAACGCTTCAGCAACATTTGTACATTCATACGGGAAGGCCGTTTGTTTGCCCGGAATGTCCGATGACCTTTGGGAGACTTTACAGATTCCGAAACCATTTAGTCAGTGTTCACAATATTATGGATGACccgaataaatttaagaaggACGCGACTGCTCTTTCAGTTGAAGAAACTGAAGCAATGGAGATAAATTATCTTAATGAGGATGAAAGAGATgaaatagatataaataatttataa
Protein Sequence: MFADQELCRFCLTEVEERFPVQAFIDSEKTIADYFNDCMNFPIDSKDELPHSICLKCLDKLLDVKQFRAQCIKSEETFKERIAKQLYAQETKLEPTEDTDKYQVLEEIFEDTNQSEDIIEFEPFEGANAISEEETSTEEQRLIIIKQQVQTGAEEIELEEGDDCELKCEECHETFKHEKNFKMHVKLFHNNESSQSSVLEKDESEDATETVPVKKEYHCQQCNWNFRFKRNYETHMKRHTEEPSVKCLKCSKCFETDSDMYKHFGIAHIDASDNENFLCPICGIHLKSKKNLNCHLEIHSANRKQYTCEFCDKLFYRKHSLTSHVRIHTGERPFECEICHRRFTQRNALATHMTLHTGKTVKCPLCDKTFSRPSFLKVHNREHTNERPYACDLCPKRYRQMTHLRAHQINHYDARPYACQICGKSFSQKSTLQQHLYIHTGRPFVCPECPMTFGRLYRFRNHLVSVHNIMDDPNKFKKDATALSVEETEAMEINYLNEDERDEIDINNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01184014;
90% Identity: -
80% Identity: -