Tcin034879.1
Basic Information
- Insect
- Tolmerus cingulatus
- Gene Symbol
- -
- Assembly
- GCA_959613345.1
- Location
- OY390710.1:21872004-21873731[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-11 1.3e-07 32.6 0.0 1 41 7 47 7 49 0.91
Sequence Information
- Coding Sequence
- ATGAAGAAAGTGAAGTATACTGAAGAAGCTATGTGTGAAGCCTTGAAAAATGTAGAGAAAAACTTAATGACTCTTCGGAAGGCatctaaaacttttaatattccaAAATCAACTCTAGCTGAtagagttaaaaataaatatgagaaCCCTGGAAAAACTGGTGCTCCAACAGTGTTCACTGCTAATGAAGAAGATATGCTAGTGAAATGGATAGTAGAAATGGGTGAAAAAGGATTCCCCATTTCTCAAATGCAACTAATAGAGTCtgctaaaaaattaattgaaaaaacgGGCCGTTCAACTCCATTTAAAGACGGGGGCCCTGGATACAAATGGGTTAAAGGATTCCTAAAGCGACATAAAAGTATATCAGTGCGTACTCCACAGGCGTTGACGCAAGCCAAAGCTGGAGTCCAAGAACAACATACCAGAGGATGGTTCAAGCGAGTCCGTGAATATCTTACTGAACATGATTATCTCGAAATCATGGATGATCCGCGCCGAATATTAAATAGTGATGAAAGTGCCTTTTATTTGCCACCCGAAGAGAATCAAGTGTTTGCGAAGAAAGGGGCAAAAACTGTTTATTCAAAAGTCTGTAACGACGAAAAAAAGTGCTTGTCAGTTCTCGTGACCGTGAGTGCCGATGGAAACATACAACCACCGATGGTTATTTATCCATACAGGAAACGGATTGCAGGTTCTATTTACACCAAATATCCCAGAGATTGGAGCATTGGTCATACAGAATCTGGCTGCATGACAAGTGCTGCCTTTTTTGAATATGTCGCCAACGTACTAAACCCATGGCtagataaaaataacattcCTCGACCAGttgtttattttgtagatGGACACTCATCACATATCAATTTAACACTTTCTGAATTTTGTGAgcagaacaaaattattttatgtgccTTCCATCCTAATTCAACCCATTTACAGCAGCCCCTAGATGTTGGTGTTTTTCATCCACTCAAACTTATTTGGAAAGAGAATGTGCAAAAGTGGCGAATGGAGCATTCtggtgaaaaattaaaaagagaagATTTTGCACCATTGCTACAACAATCTTTAAATGCGGCTATCACATCTGATACGGTGCGAAATGCGTTTCGTCGATTCGGTTTATTTCCGTTTAATAAAGACAATATTGCTTTCACTAAGATAATTCGGACGAGTCAAAGTGATGCAGGAGCAGAAAATAATGACAATCAAAAAACGGTCGACGCAGAATATCATGCTGAAAGGAATCATTCGAATGCTGATGCAATAAAAGCAATCGAGGATAGATTAGATCCAGCTATTCTAtcgcaatttaaaaataagcagGATCACTGGAGCGGTGATGTTAAATATACTGCATTTCAggtttggaaaaatttaactgcAAACCACGAAATCACCTTGATCAACAATTGCCCAAATCCAAGTATATCAGagcaaatgattttaaacgaGTGTAATAGTAACGAACTATTAGAAGGAGTTATTGGTGATGATGGAGTAGTGACAGTGATTAATCAACCATCTCAAACATCACAAGATCGCGAAATCAatggaaatcaaaatgatcCTTTAAGCACATTCAAAGATGCACTAATTTGGCCAAATGATCGTTTTGAAAACAAGAGAAAACCAGAAGAATCGCTATCGtccttaaataaaaagaggAAGAAGTTCATACCAACAGTTGCAACCAGTACACAATGGATGGAATAG
- Protein Sequence
- MKKVKYTEEAMCEALKNVEKNLMTLRKASKTFNIPKSTLADRVKNKYENPGKTGAPTVFTANEEDMLVKWIVEMGEKGFPISQMQLIESAKKLIEKTGRSTPFKDGGPGYKWVKGFLKRHKSISVRTPQALTQAKAGVQEQHTRGWFKRVREYLTEHDYLEIMDDPRRILNSDESAFYLPPEENQVFAKKGAKTVYSKVCNDEKKCLSVLVTVSADGNIQPPMVIYPYRKRIAGSIYTKYPRDWSIGHTESGCMTSAAFFEYVANVLNPWLDKNNIPRPVVYFVDGHSSHINLTLSEFCEQNKIILCAFHPNSTHLQQPLDVGVFHPLKLIWKENVQKWRMEHSGEKLKREDFAPLLQQSLNAAITSDTVRNAFRRFGLFPFNKDNIAFTKIIRTSQSDAGAENNDNQKTVDAEYHAERNHSNADAIKAIEDRLDPAILSQFKNKQDHWSGDVKYTAFQVWKNLTANHEITLINNCPNPSISEQMILNECNSNELLEGVIGDDGVVTVINQPSQTSQDREINGNQNDPLSTFKDALIWPNDRFENKRKPEESLSSLNKKRKKFIPTVATSTQWME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01461066;
- 90% Identity
- iTF_01461066;
- 80% Identity
- -