Basic Information

Insect: Tolmerus cingulatus
Gene Symbol: bab1
Assembly: GCA_959613345.1
Location: OY390707.1:48970020-48976896[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.5e-18 5e-15 56.3 0.0 2 45 482 526 481 526 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.5e-18	5e-15	56.3	0.0	2	45	482	526	481	526	0.96

Sequence Information

Coding Sequence: ATGTCGTCAGTGCAACAATTTTGTTTGCGGTGGAACAACCATCAgccaaatttcatttctgtgTGCTCCTCGTTGCTGCACAATGGAACGCTCGTGGACGTGACTCTCGCGGCGGAGGGAAGGCAGCTGCAGGCCCACAGGATCGTGCTTTCCGCCTGCAGTTCATACTTTCAGTCACTCTTCGCTTCAAATCCCTGCCAACATCCAATAGTAATATTAAAGGATGTGCATTTCAATGATCTTAAAACTATGGTTGACTTTATGTACTATGGTGAAGTGAATGTATCTCAGGAGCAGTTGCCACATATCTTGAAAACAGCTGaaatgcttaaaattaaaggGTTAGCTGAAATGCCTGATGCAGCTGCTTCACTGACAAAATCAGAAAGTAAATCCAGTTCAGAACAGGCTGAAGGTCTCCAAGGTGGAGGAAGTGGCTCTGATTCATTATGGGGTAGCACAGAATCACAATTCCAGcaccatcatcatcatcaccaACAGACGCAATCACATCATCAGCAGAGAAGAACTCCATCACCTACAGTAGCAGGATCATCACCAGCAACTAGAAGGAAACGCTTAAGAAAATCTTCAAATAGTGGCTCCGCAGAACGCACATCGGAGGAGCAGGGTAGCATAGAAGGTTCttcaaacattaatttatctCAAATGAGTCAGATGTCTTTTGGAGCAACTGCATCCAACTTAGCGCAAACcattcatacaaaaattatcaaagAGAGCTCAAGTACGGACACAGAAACTCACCCCCAAGATTCTTCTCAAGAAAGTATTGAAGATTCTGGCAGTCATCAACATCACGTGCAGCAAATTAAACCTGAAGTAGATATTTCGGGGGTACAACAATCAATACCTCTTGATATATCTGGACCAGGAACACCTTCAGAACACGAAGGTCCCAGTGTAAGCTGTTCTCAATCTCAATCATCTCATTCGGGTGTGCAATGGACGGTTGTCGACTCAAATTACTCACGCTTTTCGCTGCAATCATGCCAAGGCAATATCTCAATCGGTGATAATAATCAGACAtcagaaagtggaaatagtACCACTAACGGACAACAGCATGAGCAACAAAATGCCAGTACTTCAACAGGAAATTCAGTTGTAACATCGAATCAACAGAACCAGGGCCACATACAAATGCACTATCAAGGATCATCCTATACTCCGCAAATCATATCTGTAAACAGTCTCGTCAGCAGTTATTCACAAAATTTGTCTACTCCAACATCACCAAATGAGTCTAGTATGGTGCAGTCAGTTTACAGTCAGGGCCCCACACCTACTCAGTCTCCCGTACACCAAATAGCGTCCACAACTGCCAATAATACGACAGCGCCGAATGCCACAACGCAGTGCCAGCAGACACAGGTAACTCCAGCGCCGCAGAAGAGAAAGAGATCTGTGAATCCTCAGGgagatgaaaattttcttagaGCTCTAGAAGCCGTTCGTTCCGGAGGGATTGGATTTTGTAAAGCGGCTCGACTATATGGAGTCAATAATAGAACGCTCTGGTTGGAGTATAAAAAGCGTGGCTACCCCATAAGCAGGCCCAGCATTAAAAGTCGTATTAAATTAGAACCAAATATATCTCCACCTCCTTCAAGCACGCCGACCAACGAGGAAACGACCATAGAGAACTATACTCACATAAATCAGCCAACAATAAATATGCAAGTTCCACCAACTTCGGAAACCCCCACGCCAATCATGTGCGCCCCACACGCACATCCTATGGGCGTTATGAGCTTTTTAGACACTAGACACATGGAGTTCTCGACGGGGATTCATACGTTGTCACGGCAACGTTACTCAGACGGTGCGGTCAATGTTAATCCCACTCCCATGAATATGCAAGGTCTTAACTTCAATTCAATGTAG
Protein Sequence: MSSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHRIVLSACSSYFQSLFASNPCQHPIVILKDVHFNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDAAASLTKSESKSSSEQAEGLQGGGSGSDSLWGSTESQFQHHHHHHQQTQSHHQQRRTPSPTVAGSSPATRRKRLRKSSNSGSAERTSEEQGSIEGSSNINLSQMSQMSFGATASNLAQTIHTKIIKESSSTDTETHPQDSSQESIEDSGSHQHHVQQIKPEVDISGVQQSIPLDISGPGTPSEHEGPSVSCSQSQSSHSGVQWTVVDSNYSRFSLQSCQGNISIGDNNQTSESGNSTTNGQQHEQQNASTSTGNSVVTSNQQNQGHIQMHYQGSSYTPQIISVNSLVSSYSQNLSTPTSPNESSMVQSVYSQGPTPTQSPVHQIASTTANNTTAPNATTQCQQTQVTPAPQKRKRSVNPQGDENFLRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKSRIKLEPNISPPPSSTPTNEETTIENYTHINQPTINMQVPPTSETPTPIMCAPHAHPMGVMSFLDTRHMEFSTGIHTLSRQRYSDGAVNVNPTPMNMQGLNFNSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01431754;
90% Identity: iTF_00628160;
80% Identity: iTF_01461267;