Basic Information

Insect: Tolmerus cingulatus
Gene Symbol: -
Assembly: GCA_959613345.1
Location: OY390708.1:5446420-5450914[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 9.7e-11 1.9e-07 32.0 0.0 1 38 423 461 423 466 0.90

2 4 1.1e-13 2.3e-10 41.4 0.1 2 39 478 515 477 518 0.94

3 4 1.1e-17 2.2e-14 54.2 0.0 1 45 532 577 532 577 0.98

4 4 5.2e-18 1e-14 55.3 0.0 1 43 584 627 584 628 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	9.7e-11	1.9e-07	32.0	0.0	1	38	423	461	423	466	0.90
2	4	1.1e-13	2.3e-10	41.4	0.1	2	39	478	515	477	518	0.94
3	4	1.1e-17	2.2e-14	54.2	0.0	1	45	532	577	532	577	0.98
4	4	5.2e-18	1e-14	55.3	0.0	1	43	584	627	584	628	0.96

Sequence Information

Coding Sequence: ATGTGCAGAAAAAAAGGGACAAAGCGGGTCTGGGTGGGGATTGGGATGGGGATGGGAAGGGGTGGATTGGGGGAGGGTTGGTTCCAGAGGGTTGTGGGGTTGCTGAGAACTGCTGAGCAGTTGAAGATCAAAGGTCTTTGCGAGACAGCAGAAACAGTTGATGAGGTATCATCGGAAACAGCAACGACAACAACAATCACAGTCCCAGAAACAATACCGATTACAAATATCGGCAACACAAACACCCTCGCCCACGTAACCAACACACCGCAGAGGAAGACACGTGTCAGAAAACGTTCCAAGTCGCCGGACACAAATCAATCGATCATCAACGGCACGCAGACCTTCAACGCGTCGGCAATCGTCAACCTCAACCCGTCGTCAACATCGACAATCACATCTGGAGCAGCAGTGTCAGGTGGGAGCGCCATAACGACCACTGCGGTCACTCATTTCAAAACCGAGCACCAGTCCCAGGTGACCAGCTCGAACACTGATTCTGCCCCCGACGATATTGGATCGAAGccaacaaaaatttgcaaaaccGAGGATTCAGCAAATAATGGAAGCGGGGTTGTCACCCCAGGCACTGCTATCGTAACGCAAATCGTGGTTGCACGAGACGGTAAAGACAAAAACATGACCAGTTTGGGAATGGGAATGaaCGGCGGTCTGTTGGGCGTTCCAATGGGCTTCCTAGACTTTGCCCCGGAGCCCCCGGCGCCTTCTGCGACACCAGTTACAGAGCACGTTGACATGTCGTGTCCACCCAGCGCTGACACGAGAGACTTATCAAATCCCACCGAAGCCCTCGATATAGACAATCAGATTGCCCAACATATAATTCATCGGCTTGATCAATCGCCAATGCATCAAATGCAACATCAGTCTACGACCGACGATACAAACTCGAATCTCATCCAGAACATCAAAAGTGAAGTAGTCGATGTTAAACATCATGTTCAACAACAACTTCAAACCCAACAAACACAGACCCACCAACAACATACCCACCACCAGGATATATCGGGATCCACCGTAATGGAAATTGATCCGAGCAATATAAAACACGAACCGGGAATGATAATAACCCCGGAAATCGTCACTATGATGACGACAGGACATATGGATATTTACAATTCGGATACAAGCGAGGACTCTCTAATGATTGCGAACGGATCTCCCAACGATAACAATGAACCACACTATACAAATTTGGATCAGCAACAGGACATGAAATGCCAACCGAATGGAGCTAAGACTTGGACCCAAGAGGACATGAACTCTGCATTAGAAGctctgaaaaatcaaaatatgagTTTGACAAAGGCGTCTGTAACGTATGGTATTCCGCCGACAACATTGTGGCAGAGGGCTCACCGAATGGGCATTGACACACCGAAAAAAGAAGGCACTACAAAATCATGGAATGAAGAAGCTCTGAACAATGCCCTTGAGGCTCTTCGGACCGGACAAATATCAGCGAACAAAGCCTCAAAGGCATACGGAATTCCGTCCTCAACTTTGTACAAAATAGCACGTAGAGAAGGTATACGATTGGCGGCACCGTTCAATGCAGCTCCAACGACATGGACGCCCGAAGATTTGGAACGTGCTTTGGAAGCTATTCGTGCTGGCCACACTTCCGTCCAAAAAGCTAGCACGGAATTCGGAATTCCAACTGgaaCACTATACGGTCGCTGTAAAAGAGAGGGAATTGAATTATCTCGATCAAATCCTACACCATGGTCTGAAGATGCTATGAACGAGGCTTTAGTCGCCGTGAgGGTGGGCCACATGTCCATTAATCAAGCTGCAATCCATTACAACTTACCGTACAGCTCCCTTTATGGCCGATTTAAGCGGGGAAAATATGATACAAATGCAACGAATGCCAACACAAACAACACCAGTGCAAATACAAGCGGAAACATTGAAATGATCGAGCATAGTCCAGAGAATTCGTTGcacatatttcagcaatttcaATACAGTCCTGGACCTTCCAACACCCAAACTCACCATCATCAGCAACCACAACcccagcagcagcaacaacaacaacagcaacaacaacaacaacaacagcagcagcagcaacaacaacaacaacaacagcagcagcaacagccaCAACAGCAACAGGCACAACACCAACAACATCAGCCACAACATCAACAACACCAGCCACATCAGCAACATCATAttcaacaacagcaacaacagcatcaACAACACCCACAGCAGCATCATCCACATCAACACCTCCAGCAGCAGCAGGATGTTGTAACCTCTTCCAGCCAAGTCCATACGCAAACCGGccaaattcaacaaatttaccACCACCACAGCACTTCGGAGAGGAGTTGA
Protein Sequence: MCRKKGTKRVWVGIGMGMGRGGLGEGWFQRVVGLLRTAEQLKIKGLCETAETVDEVSSETATTTTITVPETIPITNIGNTNTLAHVTNTPQRKTRVRKRSKSPDTNQSIINGTQTFNASAIVNLNPSSTSTITSGAAVSGGSAITTTAVTHFKTEHQSQVTSSNTDSAPDDIGSKPTKICKTEDSANNGSGVVTPGTAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTEHVDMSCPPSADTRDLSNPTEALDIDNQIAQHIIHRLDQSPMHQMQHQSTTDDTNSNLIQNIKSEVVDVKHHVQQQLQTQQTQTHQQHTHHQDISGSTVMEIDPSNIKHEPGMIITPEIVTMMTTGHMDIYNSDTSEDSLMIANGSPNDNNEPHYTNLDQQQDMKCQPNGAKTWTQEDMNSALEALKNQNMSLTKASVTYGIPPTTLWQRAHRMGIDTPKKEGTTKSWNEEALNNALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALVAVRVGHMSINQAAIHYNLPYSSLYGRFKRGKYDTNATNANTNNTSANTSGNIEMIEHSPENSLHIFQQFQYSPGPSNTQTHHHQQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQAQHQQHQPQHQQHQPHQQHHIQQQQQQHQQHPQQHHPHQHLQQQQDVVTSSSQVHTQTGQIQQIYHHHSTSERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01431749;
90% Identity: iTF_00628156;
80% Identity: -