Tver105108.1
Basic Information
- Insect
- Tipula vernalis
- Gene Symbol
- gata4
- Assembly
- GCA_958295665.1
- Location
- OY282559.1:292894742-292901808[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-18 2.9e-13 52.5 2.8 1 34 105 137 105 139 0.97 2 2 1.8e-18 8.7e-14 54.2 4.9 1 35 159 192 159 193 0.98
Sequence Information
- Coding Sequence
- ATGGATAAAAACCAAGCGGATCCGTGCAAAGGATGgaaaagcaatacaactatgaCCCcagttgagagtgcagaatccatagGCCGAGATACCTTTCATTTCGAAACCATAACGACGATCtgtattatcaaaataaaagacGATAAGGTGAAAATAAAGACGTTAATCAAAGATGTTTGTTTAAGGACGTATCGAAAAATCGAGACGTGTAATAGAAGACGACAACATCGAAAAACCGGAGGACATCGAGGCGATGTTAACGAGGATGGCCGAATTGTGGTAGATGAAGATCTTTTAATGGAGGGACGTGAATGCGTTAATTGTGGAGCTGTACAAACGCCATTATGGCGCCGTGACGGTACCGGCCATTATTTATGTAACGCATGTGGCCTATATCACAAAATGAATGGAATAAATCGTCCGCTTGTAAGACAACCAAGGCGGCTGagTGCCCAACGCCGTATGGGATTATCGTGTACAAATTGCCAATCAGAAAAGACTTCATTGTGGCGGCGAAATACCAGTGGCGAACCCGTTTGTAACGCATGcggtttatattataaattgcaTGGTGTAAATCGACCATTAGCTATGAAGAAAGAAAATATACAAACACGTAAACGTAAACCAAAGGGAagtaaaaattcgaataataatgATGGCGAATCTGGTGCACCAGCTGGAAAAATGGCTCGATACAGttcaaatagtaataataatagtaatacgAATAATAATATTGCGACAACAACAACAGCGAGCCATGATAcagaatatcgtacaacatcaTCGATTCAGCACACTAACTCTTTGATTCATGGCGGTACAATTACGTCTGCATCAAATATATCACCTAGCCATGAAACTTTGTCACCATATTCGCCGACCACACCAACTGCAATCCAAagcacaattaaaaataataataattcgtacAATCAAAAGAATCTCTTTTTACCACCAACCGTGCTCCAAAGTGTCGGCGGTTTCTCATCCAATTCGCATCTGTTACATTCACATCATATTTTAAGTCCGGAGTACAGCCCAATACATTcaccaaataattttggattttttgacaTGATGTCACCAAATTTACCGGAGCACATAATCAAATTGGAGAATTCGCATAATAGCCAGCAGCAAcatcataacaataataataatcatcatcatcatcatcagaatTCATCGTCACATAGTCCATCGTCGGAGGATGAAGcccatcatcatcataatcataatGCCAGTGTGGGAGATCAAACCGAATTGGCACCAATCGATTCACATAATATCATAAAATCAATTGATCGGCCAACCGTtgttaaattagaataa
- Protein Sequence
- MDKNQADPCKGWKSNTTMTPVESAESIGRDTFHFETITTICIIKIKDDKVKIKTLIKDVCLRTYRKIETCNRRRQHRKTGGHRGDVNEDGRIVVDEDLLMEGRECVNCGAVQTPLWRRDGTGHYLCNACGLYHKMNGINRPLVRQPRRLSAQRRMGLSCTNCQSEKTSLWRRNTSGEPVCNACGLYYKLHGVNRPLAMKKENIQTRKRKPKGSKNSNNNDGESGAPAGKMARYSSNSNNNSNTNNNIATTTTASHDTEYRTTSSIQHTNSLIHGGTITSASNISPSHETLSPYSPTTPTAIQSTIKNNNNSYNQKNLFLPPTVLQSVGGFSSNSHLLHSHHILSPEYSPIHSPNNFGFFDMMSPNLPEHIIKLENSHNSQQQHHNNNNNHHHHHQNSSSHSPSSEDEAHHHHNHNASVGDQTELAPIDSHNIIKSIDRPTVVKLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -