Basic Information

Insect: Tipula vernalis
Gene Symbol: ZFY
Assembly: GCA_958295665.1
Location: OY282559.1:85820173-85826719[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.082 45 8.1 0.2 1 23 140 163 140 163 0.96

2 16 0.052 29 8.7 7.0 1 23 173 195 173 195 0.96

3 16 0.00034 0.19 15.5 3.8 1 23 200 222 200 222 0.97

4 16 0.044 25 8.9 3.2 1 23 228 250 228 250 0.99

5 16 5.4e-06 0.003 21.2 2.6 3 23 258 278 256 278 0.97

6 16 0.0004 0.22 15.3 4.5 1 23 284 306 284 306 0.96

7 16 7.7e-06 0.0043 20.7 2.2 2 23 313 334 312 334 0.96

8 16 9.7e-05 0.054 17.2 0.7 1 21 340 360 340 361 0.95

9 16 0.062 34 8.4 1.6 1 23 488 511 488 511 0.96

10 16 0.0012 0.66 13.8 0.2 1 23 521 544 521 544 0.92

11 16 5e-05 0.028 18.2 1.1 1 23 549 571 549 571 0.98

12 16 0.0048 2.7 11.9 2.1 1 23 577 600 577 600 0.98

13 16 0.02 11 10.0 0.3 3 23 608 628 607 628 0.96

14 16 0.15 82 7.2 0.5 1 23 633 655 633 655 0.96

15 16 4.5e-06 0.0025 21.4 1.3 3 23 663 683 662 683 0.97

16 16 0.0019 1.1 13.2 9.6 1 23 689 711 689 712 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.082	45	8.1	0.2	1	23	140	163	140	163	0.96
2	16	0.052	29	8.7	7.0	1	23	173	195	173	195	0.96
3	16	0.00034	0.19	15.5	3.8	1	23	200	222	200	222	0.97
4	16	0.044	25	8.9	3.2	1	23	228	250	228	250	0.99
5	16	5.4e-06	0.003	21.2	2.6	3	23	258	278	256	278	0.97
6	16	0.0004	0.22	15.3	4.5	1	23	284	306	284	306	0.96
7	16	7.7e-06	0.0043	20.7	2.2	2	23	313	334	312	334	0.96
8	16	9.7e-05	0.054	17.2	0.7	1	21	340	360	340	361	0.95
9	16	0.062	34	8.4	1.6	1	23	488	511	488	511	0.96
10	16	0.0012	0.66	13.8	0.2	1	23	521	544	521	544	0.92
11	16	5e-05	0.028	18.2	1.1	1	23	549	571	549	571	0.98
12	16	0.0048	2.7	11.9	2.1	1	23	577	600	577	600	0.98
13	16	0.02	11	10.0	0.3	3	23	608	628	607	628	0.96
14	16	0.15	82	7.2	0.5	1	23	633	655	633	655	0.96
15	16	4.5e-06	0.0025	21.4	1.3	3	23	663	683	662	683	0.97
16	16	0.0019	1.1	13.2	9.6	1	23	689	711	689	712	0.95

Sequence Information

Coding Sequence: atggTTGATATTTGTCGAATATGTCTTATTGGGAAGAGTGAAAGGGATTCAATATATAGTGTGAAATTGGTTAAAAACACACCAATAACAATTTCGAAAATGATTGCGGTTTGCACTGGACTTGAGATATCCAAATATGACAATCTTCCAAATATGATATGTAAAATCTGTACCGAAGCAATATTAAATGCTTTTGAGTATCGTTCGAAATGTTGGGAGTCGCATGCTATACTTCTATCACAAGCAAAAGCAAAATATGATGAGAATCGAGAGGCAATCGCTAAATCAAAAGATAGGACGATTATTACAGAATTCGAAATTGTCCAGATTAACGAACTGCCAGAAAAATCGTTTGAAGACCAACTTGAGCAGCACGTCGATACTGTAACGGATAAATCTTGCCACTTTGGTAAGAGATATAACTGTCGGTTATGTTCACAAAGTTATGCACTTCGTTATCAAATGATTGTTCATTTAGAAAGTGCCCATCAAATTAGAATGACCATACGAAACGGTCATAAATGTCCGACTTGTCACAAAGAGttcgaaacaaaaatacaactgCAGTGTCACGTGTCTCGTCATTCACTAAACACTCATATTTGCCACTTTTGTGGGTTAacgttgaaaaacaaaaaaaatctaatcgaACATACTCGAATACATACTGGTGAGAAACCATATAAATGTGATTATTGTGATTTTCGAGCGTCACGTCTTTGTGGCATAAAATTACACACCCGTACGCATACCGGAGAGAAACCTGTTATTTGTCATGTTTGTGGTAAAGCATTTCGTACCGCTAGTCATCGTAACGTCCACCAACGATCACATTCCAACGAAACACCTTACGAATGCATAATGTGccataagaaatttaaaaaatcaagttcCTTTAAAGACCACATGATTACGCACGATCCGACTAAGTTCTGGACATGTAAAGAATGTGGCCGAAAATTTTCAACGCGTGGTTCCTTTAGGACTCATTTGAAACAGCATACAGGTGAAAAATCGTATCGGTGCAGTGATTGCGGAAAAGGATTTATACAACGCCGTTGTTGGCGAATTCATATGatttccAAATACGATAATTTTACGAATGTTATTTGTAAATTGTGTACAGATCTTTTAATTGATGCATTCTTGTATCGAATAAAATGTTGGGATTCACACAAACGCTTATTACGAGAAGCTGCTTTTCAGAAATCTTTTGTAAAGGAGGAAGCCGatgttattgaaattcaacattGTACAAAAGGGGAAATGTTTATGATGGAGGATGAAAATAACGATGAAAATGCGTTTATTGATAAGATGGTTCCAATTGATGAATCAATTGTTGCAGAAACAGATAAAACTATTACAAGTGATCAGCCAGTTATAATGCCATCAGAATCACAAAAACTTAGTGACCACGCTGAGATAATCTTAGATAAAACAAGTTACCTTGGCAAACGCTATAATTGTAAAACATGTAATCATTTATTCATGAGACGCGATAAAATTGTGGCCCATTTACGATTGGCCCATAGGATTATTATATCGATACCAAATGGATACTCATGCGATATCtgctttaaaattttcgaagcGCCTTCCACACTAAGGAACCACAAAGAAGCTGTTCATAATGGAATTTCATACATTTGTGATTTGTGTGGCGCATCACTCAAAACTAAAGTAACATTTCAACATCATATGCGAATACATACCGGTGAAAAACCATTCAAATGTAAATTCTGTGACTACCGTTCGGCTCATAATGGCACCATAATAGCCCATCAAAGGCGATTGCATACCGGCGAAAAACCATTGTTGTGCCATATCTGTGGAGAAGGTTTTATATCAGCCAGTAGAAGGTCGCAACATTTGGCTGTGCATTCGGAACCAAAATATCAGTGTATTGTGTGTCAAAAACAGTTTAAAGCTCTTACCGTTTACAAAAAACATATCATAATTCATGATCTGTCGAAATATGTGGCTTGCGATGTGTGTGGTAAGAAATTTGCAAAACGATCAAATTTGACGACCCACAGGAAACAACATACAGGTGAAAAAAATCATACGTGCAAAGAGTGTGGCAAAGGTTTTATTCAGCGACATTGCTGGCGGACTCATATGAAAAACCACCATAATCAAaatgttgtataa
Protein Sequence: MVDICRICLIGKSERDSIYSVKLVKNTPITISKMIAVCTGLEISKYDNLPNMICKICTEAILNAFEYRSKCWESHAILLSQAKAKYDENREAIAKSKDRTIITEFEIVQINELPEKSFEDQLEQHVDTVTDKSCHFGKRYNCRLCSQSYALRYQMIVHLESAHQIRMTIRNGHKCPTCHKEFETKIQLQCHVSRHSLNTHICHFCGLTLKNKKNLIEHTRIHTGEKPYKCDYCDFRASRLCGIKLHTRTHTGEKPVICHVCGKAFRTASHRNVHQRSHSNETPYECIMCHKKFKKSSSFKDHMITHDPTKFWTCKECGRKFSTRGSFRTHLKQHTGEKSYRCSDCGKGFIQRRCWRIHMISKYDNFTNVICKLCTDLLIDAFLYRIKCWDSHKRLLREAAFQKSFVKEEADVIEIQHCTKGEMFMMEDENNDENAFIDKMVPIDESIVAETDKTITSDQPVIMPSESQKLSDHAEIILDKTSYLGKRYNCKTCNHLFMRRDKIVAHLRLAHRIIISIPNGYSCDICFKIFEAPSTLRNHKEAVHNGISYICDLCGASLKTKVTFQHHMRIHTGEKPFKCKFCDYRSAHNGTIIAHQRRLHTGEKPLLCHICGEGFISASRRSQHLAVHSEPKYQCIVCQKQFKALTVYKKHIIIHDLSKYVACDVCGKKFAKRSNLTTHRKQHTGEKNHTCKECGKGFIQRHCWRTHMKNHHNQNVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -