Tver029389.1
Basic Information
- Insect
- Tipula vernalis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_958295665.1
- Location
- OY282558.1:200436508-200439079[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-96 1.7e-90 306.2 8.9 2 218 211 411 210 411 0.93
Sequence Information
- Coding Sequence
- ATGAATATAAACAACCAACAATCAGAAGGTGTTATGACCGACGATTTGGCGGATATAGTCCCTCATGAACGAGAGGCTGAAATTACGGAAATGGCAATTAATAATATAGAAATACCTGTAATAAATGATATTGCAATGGAACCGTGTCAAGAGATTCTAATCGATCCAATAGAATTATCAATTCAACATGACGATATTCTATACAAAGATGATTGCGATCCACTGGCACTGGACACAAGCGGCGTGAGCCTTTCTCAGCTAGATTCGTCAATAGAAGAAGGATCGACCGAAGGCCAAATAATCTTAGTTGATGTAAATGAACTTAAAAaagGATGTGATGAACATTCATGTAGTGAAACAGAATTGGACGATTCGTTTGTTAAAGATAACAGTACCATACTGGAAACGAATCATGAAGGTGAGGAACGGAGTGATGGATCTGACTCTGGAATCGGGCCTGAACCCCCACCTGAAGATTTATCAATGCTAGATGATAAAAATGCTGGCGATATATTCAGCATGCCATCATCGCCCACAATATCCCCAGCCAAACCTAATCGTAGTAGTTTAAAAAGACGTTCGGATAATAATGACATCGACAACGTAACCGATGGTGCAGtggcaaagcgaacaaaacggAGTATCACCTTTAATGGGGTCACGGTTTATTATTTTCCGCGGATTCAGGGATTTGCTTGTGTTCCATCACAAGGAGGATGTACCTTAGGTATGGGTTCGCATCATacacatacaaaatatttttcgttgtcGGAACATGCGGCGGAACAAAGACGAGCACATCGGTTACAATTACAGGAATTAAATCCAAGGAGTTCATCGAGCGATGATAGTGATAGTGAGGAGGAGATTAGTGATAATAGTGGTTCAGAGATAGATGCTGAATCGAATGGATTTCTTCAGCCGGTGCCAACGCGACAGAGGAGGGCATTACTTAAGGCGGCTGGGATACGAAAAATCGATACAACTGAGAAGGATGAGTGTCGGGTGATTCGTAGTTCCCGAGAGATTTGTGGTTGTACCTGCCGCGGATATTGTGATCCAGATACATGTTTTTGTAGCCAGTCGGGGATTAAATGTCAAgttgATCGACCAAATTTCCCATGCGGGTGTACGCGCGATGGTTGCGGCAATGTAATTGGCCGAGTTGAATTTAATCCAGGGCGTGTTCGAACTCATTTTATACACACAATTATGCGAATTGAACTGGAAAAGAAGCAAATGAGTTCGGACGATTGTGATAGTGCTGTAGTGACTCGTATTGGACCAAACACCCGATCTTGGATGCCACCCATAAGACTACCGATACTAGGTTTAACACTTCCGACTAGCGAATACCATAATCATCATTCCATGGTTTATAGTCACAATGAATTGACAGGCGTTGTTGGTACAAGTAATGTACTAGGTGAAATATCCGCACGTGCTAGCACAACAACTGTTGGGGCAGCAAGCACGGAATCACTTGATTTACATTATGCATATCGTGATGAATATCCATCGACACCAAATCCATTAGATAAAAGCCATTATCATCATGCGCAAAATAGTCTCGTATATCAAACACATTACACTACGTACACGACTCCGGGTTATGTCGATACATCACAAAGTTTTCATGCACCAGCCAATTATGAACATCACACGGCAACACATCATGTTCAACCAATATCGCATCCGGGAACCACAAATTATCTGCACTCCGCCTTCGATTTAAGCCCACAGGAGTCCACAGTGGGTCCCGTAAATAGTGGAACGCCCGAAATAAATGTAATCGCTAATAATCTTAATAGTAGTGATACAGAAGCAAATACAACTATTGCGCTTAACATAACCAAAAGTAGCTTTAATAGTGacgaaataaaaaccaatagTGATACCAGTAATGAATTAATCATTAGTGATTTGAACAGGGTTAGCAATGCCATTACTACTAAAATTGCTATTATGACTAGTACTGAtagtgattttataaatttgcatcCGCCGGATACAAATTCACCACGGATGGATGCAATCAATGATTTACTCGAAAGTAATCGATACTCGACGACCACCGTAAATCCGATTGATGATGGAAGTTTGGCAGAGGTTGCGGATTCAACATCAATTAACAACGAGGCAAATGAATCGACTACAACATTAATTGAAGCGGGAAATTGTAGCGGTAGCCTAGGTCAAACTACCGAtgtagataataaaaataacaatacaagtgttataaataaaaatgaaaataaattattattactaaattgtgATGATATTAATGTAATTAGTAATAATATTAGAAGTAGTAATACCACAGATGATAATGCTCTTAATATTACTGGTAATGATCTTGATCATACGATTGTCCCAGAAGACGATGTGACTAATgaaaatttaagtgaaattattaagaagAGTATTGTTGAAACTGTGGCTTAA
- Protein Sequence
- MNINNQQSEGVMTDDLADIVPHEREAEITEMAINNIEIPVINDIAMEPCQEILIDPIELSIQHDDILYKDDCDPLALDTSGVSLSQLDSSIEEGSTEGQIILVDVNELKKGCDEHSCSETELDDSFVKDNSTILETNHEGEERSDGSDSGIGPEPPPEDLSMLDDKNAGDIFSMPSSPTISPAKPNRSSLKRRSDNNDIDNVTDGAVAKRTKRSITFNGVTVYYFPRIQGFACVPSQGGCTLGMGSHHTHTKYFSLSEHAAEQRRAHRLQLQELNPRSSSSDDSDSEEEISDNSGSEIDAESNGFLQPVPTRQRRALLKAAGIRKIDTTEKDECRVIRSSREICGCTCRGYCDPDTCFCSQSGIKCQVDRPNFPCGCTRDGCGNVIGRVEFNPGRVRTHFIHTIMRIELEKKQMSSDDCDSAVVTRIGPNTRSWMPPIRLPILGLTLPTSEYHNHHSMVYSHNELTGVVGTSNVLGEISARASTTTVGAASTESLDLHYAYRDEYPSTPNPLDKSHYHHAQNSLVYQTHYTTYTTPGYVDTSQSFHAPANYEHHTATHHVQPISHPGTTNYLHSAFDLSPQESTVGPVNSGTPEINVIANNLNSSDTEANTTIALNITKSSFNSDEIKTNSDTSNELIISDLNRVSNAITTKIAIMTSTDSDFINLHPPDTNSPRMDAINDLLESNRYSTTTVNPIDDGSLAEVADSTSINNEANESTTTLIEAGNCSGSLGQTTDVDNKNNNTSVINKNENKLLLLNCDDINVISNNIRSSNTTDDNALNITGNDLDHTIVPEDDVTNENLSEIIKKSIVETVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01455760;
- 90% Identity
- iTF_01455760;
- 80% Identity
- -