Tver069832.1
Basic Information
- Insect
- Tipula vernalis
- Gene Symbol
- RCOR3
- Assembly
- GCA_958295665.1
- Location
- OY282559.1:52699364-52705092[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.85 1.2e+04 -0.2 0.0 30 46 6 22 3 22 0.87 2 3 1.4 2e+04 -0.9 0.4 36 44 161 169 155 170 0.78 3 3 9.5e-11 1.3e-06 31.7 0.0 3 46 272 315 270 315 0.97
Sequence Information
- Coding Sequence
- ATGTTTGGGAAAACAcTTCCAGATAAATCAATTGCCAGtcttgtaaaatattattattcatgGAAAAAGACGAGAAATCGAACAAGTGTTATGGATCGTaaggaacaaataaaaaaaaatgaagggtCAGAAAATGGTAGTGAAAATGGAAGCAACGAAGATTCAGACAATGAGGAAAAGaaatggCCACTACATAGTAGAGGTATAAGGCGAGGAAGTGGTTCTCCCCCACGAGTAACAAATGACGATTCAAATAGTACATCAACAGCTACCACAAATCAGGCTGGAACAACTCTAAACACTTTAAACACCACAACCAATGCAAATTCAgataatattgatttaaaaacaaatttatcaacaaatcgCCAACAAACATCATCGAATAACCAAAGTATATCCTCAGGTACATCAATCTCTTGTTCTGGGTGTGGTGTTGCTTGTAATCAAGTTAATTTTACAATACAGGGCAAATTATGCAACAGTTGCTTTCATCATTGGAGACGTACGGGTAATTTACGTCCAACATCAGGTCCTTATTTTGGTAAACGTACAAAAAATAGCGGTAATGAACGCCACAAACGCAAACCACCTCGTGGTATGCACATAAATCATGATGATATTGTTGCTTTAGCAACCGATTCCGATCAAGCAAACCGTAATGATGAGCTCCTAGCAAGCATGGATAGAGAAATTGTTGCGCTGTGGTCTCAAATACAACAAAATCGGCAGCTTGTGAGCTCATTAAAACGTAAAAATTCAGACAGTTTGGAAGATTTACGACCTACTGATAATATTAATAGAATCAGCTCGCGCTGGAACAGTGAAGAATTATTGCTCGCTGTACAAGGCGTTCGTAAATTTGGtaaagattttttggCGATTGCTGAAACAATTGGTACAAAAACTGAGGCACAAGttcgaacattttttataaattaccgGCGCCGATATAATTTAGATACGGTACTAAAAGAATATGAAACCGAGCATGCACAGCaaaatgttgaaacaaaatCAAACGGTACATCTACTGCAGCCTCAAGTCAAAACGATAATGAAGTTATGGCGattGACATTGATGATGATGTTTCCATTACTACCAGTAAAGACTTAGAGGTGAAAGGTTGTGCTGATGTCTCTATAATTCCCGTGGAAAAAatagAGACCGAAACAACCAGTACTTCAAAATCCTCAATAACAAACACCGACGTAAATCATGTAACCAACAGTAATAGCAAAGCAGCAACAACtgctaaatga
- Protein Sequence
- MFGKTLPDKSIASLVKYYYSWKKTRNRTSVMDRKEQIKKNEGSENGSENGSNEDSDNEEKKWPLHSRGIRRGSGSPPRVTNDDSNSTSTATTNQAGTTLNTLNTTTNANSDNIDLKTNLSTNRQQTSSNNQSISSGTSISCSGCGVACNQVNFTIQGKLCNSCFHHWRRTGNLRPTSGPYFGKRTKNSGNERHKRKPPRGMHINHDDIVALATDSDQANRNDELLASMDREIVALWSQIQQNRQLVSSLKRKNSDSLEDLRPTDNINRISSRWNSEELLLAVQGVRKFGKDFLAIAETIGTKTEAQVRTFFINYRRRYNLDTVLKEYETEHAQQNVETKSNGTSTAASSQNDNEVMAIDIDDDVSITTSKDLEVKGCADVSIIPVEKIETETTSTSKSSITNTDVNHVTNSNSKAATTAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01053117;
- 90% Identity
- -
- 80% Identity
- -