Tver165590.1
Basic Information
- Insect
- Tipula vernalis
- Gene Symbol
- DNAJC1
- Assembly
- GCA_958295665.1
- Location
- OY282560.1:295979972-295981584[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2 3.1e+04 -1.5 0.1 3 12 21 30 20 43 0.66 2 3 0.0002 2.9 11.4 0.0 3 30 292 323 290 332 0.82 3 3 1.1e-10 1.5e-06 31.5 0.1 3 44 374 420 372 422 0.92
Sequence Information
- Coding Sequence
- atgttttataaaaatctacTTAAtcttactatttttttatttataataacccACACAAGGGCATGGGACACAGAAGAGCtggaaatatttgatttagtCGAAGAGATCAAAGAGAATTTCTATGGAATGCTCGGTGTTCAACAGGATGCTACGTTGCAAGAAATTAAAAGGGCATTTAGAAATTTATCGATTGTCCTACATCCGGATAAAAATGATGCTGAAGATGCGAACATCCAGTTTAGAAATTTAGTGTCAATTTATGAAACACTGAAGGATCCGAGCAGACGTGAAAAATATGACAATGTGCTGAAGAATGGTTTGCCCAACTGGAAATCTGCATTATACTATTATAGACATGTCCGGAAAATGGGATTGCttgaaatgtttattattcTGTTTGTAATTATAACAATTGGGCAGTATTTCGTGTCATGGGCCGCATACTTAGAAAAGAAGTACACTGCTGAGCAAATGTTGGGCTCAAGGTTGAAGAAACTGCAAAAGAAAAATAAGACTAATGTAAATATCGATGAGATTCTAAAAGAAATACCGGCGCCCAGCATCAAAAATACTCTCCCATTTCAAATTCCACGTGCCATATGGAATACACCTCGTAccataaaagaaatatttgtagCGTATAAAGAGCATAAGAGGGCCGAAGATGAACGTAAGCAACAGGAATTAGAAGAGGCGGAGGCTGATAGACTATATGAAGAAGAGTTGGCGagagaaaaggaaaataaaggAGTCCGAAAACGTAAACCTCTATTTGTTGCACCCGAAAAGACAGAAGAAGAATTGTCGAGATATTCCAAACCATTGGCTCGTCAACCGGTCCCAGTAACAGTTAGTAAAGTTATAAGTGGTGGCATTTGGACCGATGATGACTTGATCGAATTGACCCGCCTTATAAAAAAGTATCCTGGGGGGACAACGGACCGCTGGGAGTTAATTGCTGATGCATTATATAGAAATGTAGCTGAAGTAACACATATGGCAGCCAAACTAAAGGAGAACGGGTATCGGGTTAATTCTCCTACTGACAGTGTGGCTGAGTCTCTGGCTCCgaagaaaaaagagaaaaagaaaGCTGAACAAATTATGGTCCCTGAGGCTACATGGTCTCAAGAGCAACAACAAGCACTCGAATCAGCGATtgttaaatatccaaaatcaaaTTCAGCCGACCGTTGGCAAAAAATCTCCAATACTGTTCCAGGAAAAACCAAAGAAGAATGTCTCTTACGATACAAGTATCTAGTAGAACTCGTAAAAATGCAACGACAACAAGCTCTAGAAACTACCGAGCTACCAACCGAATCGACCACAGCCGAACCAGTAACAGAACTAAACGAATCCGAAAATGATGCAGAAGAGGTTGTAAAAATCACaaagaaatcgaaaaataaatcaCAACAGCAGGCCAAAGACGGAGAACCGCAGCAGAGTAAAGGTAAGAAGCGAAATCTTCGAAAGGAAAGGAAGCGGAATATGGAATTCTCGAGTAATGAGGAATCTGActatgatgataatgatgatgatgtttga
- Protein Sequence
- MFYKNLLNLTIFLFIITHTRAWDTEELEIFDLVEEIKENFYGMLGVQQDATLQEIKRAFRNLSIVLHPDKNDAEDANIQFRNLVSIYETLKDPSRREKYDNVLKNGLPNWKSALYYYRHVRKMGLLEMFIILFVIITIGQYFVSWAAYLEKKYTAEQMLGSRLKKLQKKNKTNVNIDEILKEIPAPSIKNTLPFQIPRAIWNTPRTIKEIFVAYKEHKRAEDERKQQELEEAEADRLYEEELAREKENKGVRKRKPLFVAPEKTEEELSRYSKPLARQPVPVTVSKVISGGIWTDDDLIELTRLIKKYPGGTTDRWELIADALYRNVAEVTHMAAKLKENGYRVNSPTDSVAESLAPKKKEKKKAEQIMVPEATWSQEQQQALESAIVKYPKSNSADRWQKISNTVPGKTKEECLLRYKYLVELVKMQRQQALETTELPTESTTAEPVTELNESENDAEEVVKITKKSKNKSQQQAKDGEPQQSKGKKRNLRKERKRNMEFSSNEESDYDDNDDDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01454785;
- 90% Identity
- iTF_01455680;
- 80% Identity
- -