Tver023747.1
Basic Information
- Insect
- Tipula vernalis
- Gene Symbol
- dnajc2
- Assembly
- GCA_958295665.1
- Location
- OY282558.1:166784507-166786504[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.2 5.9e+04 -2.4 0.4 7 18 326 337 325 339 0.89 2 3 0.0018 25 8.4 0.0 3 31 436 468 434 475 0.87 3 3 9.7e-13 1.4e-08 38.1 0.3 3 41 604 646 602 650 0.91
Sequence Information
- Coding Sequence
- ATGGATAGTACGAATCGAGTTATTGGGAGTGTTTCATTAATAACCCCACTCGATGTGAAGCGAGtgcaaaatattggaaaatattacataaaataccATACAAGGCATTTGAATGATGGGAACGAAGTCGGCGATTCTGACAACTCAGTCGAGAGTGTATCTGATCAAGATATTGATATTTGCATAGATGTAGAATATTTACAGAGTTTGGATCCGAAGGAGTGGAAAGATCAAGACCACTATGCTGTATTGGGATTGAAAACGGTCCGCTATAATGCTACGGACGATGATATAAAGCGGGCATATCGTAAAATCGTTTTGAAACATCATCCGGACAAACGGAAAGCAATGGGTGAAGATGTTAAAACGGAagatgattattttatttgtattacgcGAGCTTATGAAACGTTAGGGAATCCAACGAAACGACGATCTTATGACTCGATTGACCCTGAATTTGATGATTCACTACCGACACAAAGTGAAATAGCCAAGAGCTACTACAAAGTATTTGCCAATCAGTTTAAGATGAATGCTCGCTGGAGTGAAACGCCAAATGTTCCTGAATTTGGGGATGAGAATTCCACACGAAAGTATGTTGatactttttataatttctggTATAATTTCGATTCATGGCGCGAGTATAGCTACTTAGATGAGGAAGACAAGGAGAAGGGACAAGATCGTGATGAGCGACGCTGGATAGAAAAACAGAATAGAACAATTCGAACCAAAAGAAAGAAAGAAGAAATGAGCCGTATTAGACAACTAGTTGATTTAGCCTATAATAATGATCCGCGCATTGTAAAATTCAAGCAAGAGGACAAGGATAGAAAACTAGCGGCCAAGCAAGCAAAATTGAATGCAGCACAAGCTCAAAAAGCTGAAGAAGATCGAATAATACGTGAAGCTCAAGCGGCCAAATTGAAGGTAGAACAAGCTGAACAGAAACGTATTGAAATTATTCGCCAAGAAAAAGAACAGTTAAAACGTGccttgaaaaaagagaaaaaactaCTTCGTGATACGGCTAAAAGCAATGATTATTACACAACAGATGATAAAGAACGTCTTAAAAATATGGAAGGGGTCGAAAAAATctgtgaaatgttaaaatttctaGAGCTGCAAGAATTCAACAAAGATCTTCAACTGGGCGGACGACAAACATTTGTTAAATGTTTAACGGAAATCGAGCAAAAATTGGAAGAAGAGCGAAAATCATTATTTGCCAATAGAAGCAAACCTGTCGACAATCAAAATTCAACTGGATCAATTAAAGTGGTTGATAAATCACAGATGTGGGTGCCGGAAAATATGCAAGTCCTAATTAAGGCCGTCAATTTATTTCCGGCCGGTACAATTCAACGCTGGGAAGTTATTGCAAATTTCATGAATCAACACGGTACTTTGGCCAATGATCGTAAATTTTCGGCCCGTGACGTTCTAAACAAAGCAAAAGATTTGCAAGCAAGTgatttctcgaaaaattcattaaaacttCAGGCAAATGAAAATGCATTCTCatcatttgaaaaatcgaaaaaagagTTGAAAATTGTGGATGTTGCAGATATAAGTGTTAAAACCGATGAGGAAGTCAAAAAGAAAACAAGAAAAGCCGAAGCTAAAATGAATGGTGTTGACAAACAGCcatcaccaccaccaccacaGCAATCTCCATCAGTTGTAAGAGCCGTTGCCGCACCAGAACCACCACCATCTGAACCAACTCCACCTGTTACCACAACCACCACAGCAGCAGCCGTCGCAGCACCCGAACCTAAAGAAGATTCATCGCGTACTTGGACAAAAGAGGAACAAGCTCTACTAGAACAGGCAATCAAAACGTATCCTATATCAACACCAGACCGTTGGGAACGTATTGCTGAGTGCATACCTAATAGAACCAAAAAGGAATGTTTACGTCGCGTTAAAGAATTGGTAGATCAAGTGAATGCTAAGAAGAAGGCTCAACAGAgtgttaaataa
- Protein Sequence
- MDSTNRVIGSVSLITPLDVKRVQNIGKYYIKYHTRHLNDGNEVGDSDNSVESVSDQDIDICIDVEYLQSLDPKEWKDQDHYAVLGLKTVRYNATDDDIKRAYRKIVLKHHPDKRKAMGEDVKTEDDYFICITRAYETLGNPTKRRSYDSIDPEFDDSLPTQSEIAKSYYKVFANQFKMNARWSETPNVPEFGDENSTRKYVDTFYNFWYNFDSWREYSYLDEEDKEKGQDRDERRWIEKQNRTIRTKRKKEEMSRIRQLVDLAYNNDPRIVKFKQEDKDRKLAAKQAKLNAAQAQKAEEDRIIREAQAAKLKVEQAEQKRIEIIRQEKEQLKRALKKEKKLLRDTAKSNDYYTTDDKERLKNMEGVEKICEMLKFLELQEFNKDLQLGGRQTFVKCLTEIEQKLEEERKSLFANRSKPVDNQNSTGSIKVVDKSQMWVPENMQVLIKAVNLFPAGTIQRWEVIANFMNQHGTLANDRKFSARDVLNKAKDLQASDFSKNSLKLQANENAFSSFEKSKKELKIVDVADISVKTDEEVKKKTRKAEAKMNGVDKQPSPPPPQQSPSVVRAVAAPEPPPSEPTPPVTTTTTAAAVAAPEPKEDSSRTWTKEEQALLEQAIKTYPISTPDRWERIAECIPNRTKKECLRRVKELVDQVNAKKKAQQSVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01051874; iTF_01054261; iTF_01053111; iTF_01458277;
- 90% Identity
- iTF_01053111;
- 80% Identity
- -