Tver109040.1
Basic Information
- Insect
- Tipula vernalis
- Gene Symbol
- kn
- Assembly
- GCA_958295665.1
- Location
- OY282559.1:317447997-317451956[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-95 1.2e-89 304.6 0.1 249 385 14 150 7 152 0.98 2 2 2.2e-09 0.00042 22.2 12.6 422 503 153 237 149 266 0.71
Sequence Information
- Coding Sequence
- ATGGTCGTTTCAATACAAGGTTTATATCCACCATTGCCAATAGCGCAACCATGTATCAAAGCAATATCGCCCAGTGAAGGTTGGACCACTGGTGGTGCACAAGTTATAATTGTTggtgataattttttcgatGGACTACAAGTAGTTTTTGGTACGATGCTAGTATGGAGTGAGCTAATAACATCGCATGCGATCCGGGTACAAACGCCACCACGTCATATACCCGGTGTTGTTGAAGTTACATTATCGTataaaagtaaacaattttgtaaaggTTCACCGGGAAGATTTGTGTATGTTTccTTAACTGAACCAACAATAGATTATGGTTTCCAAcggttacaaaaattaatacctCGACATCCTGGGGATCCAGAAAAATTACCCAAGGAGATTATATTAAAGCGGGCAGCCGATTTAGCTGAAGCTCTATATTCAATGCCACGATCGCCAGGCGGATCAACTGGATTTAATTCGTATAGTGGACAGTTGGCGGTCAGTGTTCAAGATGGTGGGGGACAATGGGGTGAAGatGATTATCAACGGGCACAAAGTAGTAGTGTTAGTCCTCGTGGAGGATATTGTAGTAGCGCATCGACACCTCATTCGTCCGGTGGTGGATCTTATGGTGGTGGTGGTAATGGATATGGGCCAGCCCCGAATATGGGCGCCCTATCATCTTCACCGGCTAGTGTTTTTAATTCGACTTCAAGAGGACttgtaaatggttttaatcCATTTACATTGCCGACATGCAGTACTCAAGGATATACATCAAGTCCTCTAGTCACATcatcaaaataa
- Protein Sequence
- MVVSIQGLYPPLPIAQPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLTEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSPGGSTGFNSYSGQLAVSVQDGGGQWGEDDYQRAQSSSVSPRGGYCSSASTPHSSGGGSYGGGGNGYGPAPNMGALSSSPASVFNSTSRGLVNGFNPFTLPTCSTQGYTSSPLVTSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455729;
- 90% Identity
- iTF_01163736;
- 80% Identity
- iTF_01454653;