Tver155877.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tipula vernalis
Gene Symbol
Jarid2
Assembly
GCA_958295665.1
Location
OY282560.1:226492597-226500124[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-22 6.5e-18 68.2 0.0 6 89 1497 1578 1493 1578 0.93

Sequence Information

Coding Sequence
atggtaatATCCAAAGACGGAAAACGTAAACGAAAGGAGATTTCTTCAACGGCAATAGATAAAACAGCAGAAATATCTAAAAGAACAAAAGTACATGCACAACGTAAGTTTGCTCAAGGCCAGAGCTCATCAACATTTCAACTAGCAACAAATGTATCAACAACAGCACCACAGCAACCAGGTGTAATTGGCAAAGATACCATACAGCCGGCACTACCACCAACTGAATTAATCACACACAAAAGACCAAACACAGaagattttttaacatttctttgtTTCCGTGGTACACCTATTCTACCACCAcatttagattattttaattcaaataaccGTAATAATTCTACTAGCAATAacgtcaataataataatgaatatgaAGAATCTCAGAATTTCCCAAAATCTGTAACTTTGGGAACGAGCGAACCACAAGCAAGTGGTGGACACCAATCAGAAGTAAATGGTAATCCCGGAAATAGTAGTGTACCTAGCAGTACTATTGATATACCGATAACATCGAGtgaaaataatgtaaaccctgAGATTAATAAATCTGCGCCAGCACCACCAGAGAAACCAAGTGATAATAAAGATGGTTTTATTCCGTTTGGCGTTAGAAAACGAGCCGAACAAATCCCCAACCGTGATAAAATGCAGGCATTACGAAAGAAATATCATGACCAAAGAATTGCTAAACTTCGATCTAAAGGATTTGTTAAATCACGCACAACTATTCAGACGAGGTCGAATATTAATGCGACTGCTGTTAAATTGACACAAAATGAGactttaattgaagaaaatataattgaattggaACCGGAAATACCTATACCTCCTAAAGTTGAAACACCTTCTAAACCGACGATAAATAATGAAAATAACGTTGTTCCAAAGCAGAATTCTGTGGAAGATAAAAGTGAAAGTGAAGATTATTCATCAGCGGATGATGAACCTCTGGCTGTAGCTATTGCCAAGAAACCCAAATTGCCTGTGACCGTAAATCAAGAAAATAGCAGTAGTTCGGGCAAAGTGACTCGAAGTAAGcgatattttgagaaaattgatgaGAAAAATACAACATTGAATGTAAATAAAAGAGcagagaaaatgaaaaaaactgaGAAGCCAGAGCCGCCAATAGTTCAAGTTACTCAAGAAGTTCCAATAGTCAGCCCAATAAAATTAGAGATTATTCCAACTAAAGTGGTTAGTAATGCTTACTTGAAACCACAAGAAGAAATTTCTCCTCTTCCTGTTCCACAAAAGAGACAATACaacaaaaagaagaaattagTTCATGAAATTGAAAAACCATTAGAAACACAACTACCGATAATGGAGCATACCGAAATAGAAGCTCGAATACCTCGCCTTTCGCGCAAAACTAAAGAAGCAGCCACTATTTATATGGAGCTTATTGGCCGAAAACTTACATCAAATGAGAATGACGGTGACGACGATAATCAATCGATCGACAGTTTTCCTGAACTACCAAATGTGCGTAAAACccagaaaatggaaaatgaactcaaagaaaagtacaaaaatgagaaaatattaAACCCTATAGAAATTGTGAAAAAGGAAACATACAAAGCGAAGGTAGCTACTAAAACTACAccgcaaaaaaaattggagaaaagTTTTAGTGATTCGGATGAGGAACCTCTAGCCACGAAAGCCTACagtaagaatataaaaaaatcttttacaaaacaaattgaagtgGAAAAACTTCGAGTTTCAACTAGTTCCACTGGgttgaatttaaatgaaaccacCGAGGTAACAACAGAAAccgttaataaaattgaattgaatattaCAATTCCAGTATCACCATTTAAACCTACTATAAATTCAACGATtacaaattattctaaaattgaGGAATTACCTCCGCCTGATATTCCGAGTCCGATAAAAGAAAGCAGTTTACCCAAAACGCCTGCTAACTTGTTGTCACCATTTCAACGGACAACTTTTGCTTACGATCTTAAAGATGACTTGGAATCGTCTAAACTTAATCAAACTAAcgatttgaataataaatcatttgaagatttaTCACTCGAACGGATgtcaaaatcattagaaaatgaaGAAGACATAATGAAAAAATTGCGAGAAGTTGAGGAAATGGCAATATTAAAATCTGAGAATTCGGCAAAACAAATGAAACTCACCACCTCAAGCACTATGCGAGATTTGATGAATCCTCTTCCTAGTATGGAGGAATctggtaaaatatttggtattGCAAGTGTTAGCCTTGCTCAGAGTTCAGGACCAATTGATACCAAATGTACCTTAGGAAAATGTGGTTCAATTCATAAACCTTCCTTGGGTCCAGTAGTTCCAACTGAGGCTATTTTGGGTGAACAACTTTCGAGTAAAGAGAGGCGACGAGCCAAAGTTAACATGACCCatgaacaaatacaaaaatggttAATTGAAAGTTGTGTCACACCGGATCCTGACGTAATGTCGTCCGATTTTATAGATCTGAATGATTTGGATTCACCACTCCAGCCTATTgtatatggaaaatcaatttCACCATTTAAAGATATTGATGAGCTGCAACCTTCGCAATCAACAAGTAGACAACCAAGATCCAGGTTTGAACCACAAATTTCACCAACTAGTAGACAACCAAGATCGAGACCAGAAAAATGTATGGCGGCGCGTGACAAAATTCCGACATTATCAACatcttctaatttaattaaagGTCCATCACTTAAAGCCAAACCTGTTTTAATAAAGGATGAagcaattaaagaaaaaacattCAAGGAGGAACTTAATAATTTGTATAGCTCTGAACGAATATTGCCTCAGGATTCTAATATTCCACATTCATCACTTTCTGCAGTATTACAGGCGAGCTATGAAATTTCCAAGCCCGTAAATAAACCAgtcattaatataaataatgagTACTCTAAGCCAGTTGCAATTagagataaattattaaatacaccGGAACCTCCTAAGCCACAACTAATTTACACCAAAATGAACACAACGTCTGTTACACAATCAAAACCTACCTTACCTATAGTTTCGGAATTAAAACCTCCAAAAGAACAAAAGGAATTGGAGAAAAAGATTTCTCTACCAAATTTATCTCAAATTAAAGAACAGAAACACACTGTAGAGAAACGCGAACCCAAACCAAAACCCGAGCCTAAAACTACAAACGCTAAAGCAAAAGCTTCGAAACAACAGAATCAAAAGCGCCAACAAAATACAgaccgaaaattaattttcaatcaacgtCGAACTCCGGTATACAATACAAAACTACCAGACagtgtaaaatcaaaattaattgtaaattcaTTCGGGGCATTTTCACCAGAAAATGAGACAAGCATCTATTCATTTGATAAAGAAGATGATGTCATTCCAGTTGCCACACCATTTCGTAGACATAGCCGGCGTGAATCAAATGAAAATCAACGCCATGACGAGGCAAGCGATAAAGTTGTAGCAGCAAGTACTAAGGAAACTTCTACGAGTGAAAATAAAGAGGAATTAGAAGTAAcacctaaaaaaaatgttgcatcACAACCAGAAGTTTCGTTAACATTAAGTCCAGAAGAAAATACCAAATCGGCGTCTATAGCCGTACAAGTTAGTTTAGAAGAGATGAATGCGACGAAAGATGTTTCAACAACCACCTCTAATAAATCGATTACAGAAAAGACACCCGAAAATAATGATTCCGATTCGGATGGACACACATTTTACATTCCACTTCAAGGAACAAATTTAACGAGCGGTAAATCTGATCAAATTATACAAGGAGTCGCTGTTAAACTAGGGACAGAGGGTCCAGAAGGTCCTAATCAACGTGTTATAATGCATGCTAAATTAGTGACAAAAACTCATATGGGCACTACGTCAACGCCCCTTCCCGAGACCGTAGGTAATGTTCAAGAACTAGTGAAAAGTTTAATCGCGGGTAAAGAATCATGTAAATCCGTACCAATCGGTACAGTTCAGCCTCGTTTCAAATCGAATAATTCTACTGTTGATGAAACCAATCCGACTTGCACAAATACACCATCACAATCGCCGTTACAAACCCCTCAAAATAATTCATCTCAATTATCTcgagtaaattcaaattcatcctTGCTATCGAGTAAAACTAATCAAAAGGTTCACTGTCgagctacaaaaattaaaaatgaaatttctctgTTACCCATCAATAATACGACATTTCCTATGCACGATGATCCAGCGCAAATGGTAGACGCGCCAGTGTTTCGACCAACTGAAAAGGAATTTGCCGATCCCATGGAATATATTGAGAGAATTGCATCGGCCGCATCACGATTTGGTTTGTGTAAAATTATTCCACCAGATAGTTTCAAGCCAGATTGTCAATTATCTGATGAAATAAGGTTTAATGCCTATAATCAATATGTACATCGTATGTTGAACCGCTGGGGGCCTAACACCAAAGAATtatgtgctataaaaaaatacttaaccacgcaaaatatttcaatggtTCATCCACCTTGGATTGGTGGTATGGAAGTTGATTTGCCACGACTCTATCACACTGTACAAGAATTAGGTGGCTTAAAGGAtgttattgaaaagaaaaaatggacGAAGGTGGCTGAAGAAATGTGCATTCCTAAAACGGCTCATGATCGCGTCACTAAATTGGACGacatatattgtaaatatttgctGCCATATGATACACTTTCGCCAGCAGAGCGACAGAAGTTATTTGATGAGGTGGAAGCCGATTGGGCAAAACGGGAAGCAAAAGCAAGGCGTAATGCCGATCGATGTATGAATTCAGAAAGCGTTAGCAATGACGGTTCCGATGATGAAGATGAATCGGAAGATTCAGACAGTGGTGATATTATGGAATGTCTTGTGAAAGGTCGAAGTATGCCGTTAAGCGCATTTTTCCGAATTGCTCGCAACACAATGTCGGTGTGGTTTAAAAATTCTGAGCCAGATACCAGTGAAATAGAAGCCGAATTTTGGCGACATGTTGCAGTTCGCGATTGTCATATTTGTGTTCACTCTGGATCGATTGATTCGAGTGGCTGGGGTTATGGATTTCCAACACCAggaccaaaatcaaaatcttCTCCGTGTGCCAAACATCCCTGGAATTTAAAAGTGTTAACCAATCATAGTGGCTCTATACTTCGAAGTTTGGGACCTGTCATGGGTGTAACAGTACCAACATTACAATTTGGAATGCTGTTTAGTGGATGCTGTTGGTACCGTGATCCGCATGGTTTACCGTGGATTGAATACTTACATACTGGGGCGAGTAAAATTTGGTATGGTGTACCAGATGAACAAAGTACCAATTTTCGTTCAGCTTTGGTTAAGCTAGTACCTACccattgtcaaaataaaactatttggtTGCCTAGTGATACGGCTATGGTGCCACCATATATGTTAACCGAGAAAAATGTATCTCTTTGTCGCACCGAACAATTACCAGGTGAGTTTGTGGTCGTCTTTCCAAGAGCGTACACCTCAAGTGTATGTACTGGGTATGTGGTATCAGAAAGTGTTTATTTCGCAACAAACAGTTGGTTGGAAACTGCTAAACAAGATTTTAAGGATATTGAAGAGAGTTGTGAACCTGTTGTATTTTCCTTGGAACAATTATTATTCGCAATATCATCGGACACCAGATCCAATTACGAAACATTGGTTCAAATATTGCCAATGGCAACGGAAATGTATGAAAAAGAGGTTGAGTTAAGACGAAAACTTAAGGCCGTCGGTATTACAAAAGTGGAAAAGTTGGTTATACCGAAAAATCGAAAACAAGTAACAGAAGAAAATGAATGTGACATCTGTAGAGCAAACCTTTACATCTCGCTGGTCAAAACCGAGGAAGAAGGTGCAATTTATTGCATACCACATGCgatcaaatatattaaaaataatcgttTAACTGCAcccaattgtaaattaatttatgcatATAGTGTTGAAGAAATTGACCAAATGCTAGAAGGGCTGAGGGAACGAATCAACCAAcagaaacataaattaaatacgaAAAAACAATCACAGGGCTCGAACCGATATGGAAAATATTAG
Protein Sequence
MVISKDGKRKRKEISSTAIDKTAEISKRTKVHAQRKFAQGQSSSTFQLATNVSTTAPQQPGVIGKDTIQPALPPTELITHKRPNTEDFLTFLCFRGTPILPPHLDYFNSNNRNNSTSNNVNNNNEYEESQNFPKSVTLGTSEPQASGGHQSEVNGNPGNSSVPSSTIDIPITSSENNVNPEINKSAPAPPEKPSDNKDGFIPFGVRKRAEQIPNRDKMQALRKKYHDQRIAKLRSKGFVKSRTTIQTRSNINATAVKLTQNETLIEENIIELEPEIPIPPKVETPSKPTINNENNVVPKQNSVEDKSESEDYSSADDEPLAVAIAKKPKLPVTVNQENSSSSGKVTRSKRYFEKIDEKNTTLNVNKRAEKMKKTEKPEPPIVQVTQEVPIVSPIKLEIIPTKVVSNAYLKPQEEISPLPVPQKRQYNKKKKLVHEIEKPLETQLPIMEHTEIEARIPRLSRKTKEAATIYMELIGRKLTSNENDGDDDNQSIDSFPELPNVRKTQKMENELKEKYKNEKILNPIEIVKKETYKAKVATKTTPQKKLEKSFSDSDEEPLATKAYSKNIKKSFTKQIEVEKLRVSTSSTGLNLNETTEVTTETVNKIELNITIPVSPFKPTINSTITNYSKIEELPPPDIPSPIKESSLPKTPANLLSPFQRTTFAYDLKDDLESSKLNQTNDLNNKSFEDLSLERMSKSLENEEDIMKKLREVEEMAILKSENSAKQMKLTTSSTMRDLMNPLPSMEESGKIFGIASVSLAQSSGPIDTKCTLGKCGSIHKPSLGPVVPTEAILGEQLSSKERRRAKVNMTHEQIQKWLIESCVTPDPDVMSSDFIDLNDLDSPLQPIVYGKSISPFKDIDELQPSQSTSRQPRSRFEPQISPTSRQPRSRPEKCMAARDKIPTLSTSSNLIKGPSLKAKPVLIKDEAIKEKTFKEELNNLYSSERILPQDSNIPHSSLSAVLQASYEISKPVNKPVININNEYSKPVAIRDKLLNTPEPPKPQLIYTKMNTTSVTQSKPTLPIVSELKPPKEQKELEKKISLPNLSQIKEQKHTVEKREPKPKPEPKTTNAKAKASKQQNQKRQQNTDRKLIFNQRRTPVYNTKLPDSVKSKLIVNSFGAFSPENETSIYSFDKEDDVIPVATPFRRHSRRESNENQRHDEASDKVVAASTKETSTSENKEELEVTPKKNVASQPEVSLTLSPEENTKSASIAVQVSLEEMNATKDVSTTTSNKSITEKTPENNDSDSDGHTFYIPLQGTNLTSGKSDQIIQGVAVKLGTEGPEGPNQRVIMHAKLVTKTHMGTTSTPLPETVGNVQELVKSLIAGKESCKSVPIGTVQPRFKSNNSTVDETNPTCTNTPSQSPLQTPQNNSSQLSRVNSNSSLLSSKTNQKVHCRATKIKNEISLLPINNTTFPMHDDPAQMVDAPVFRPTEKEFADPMEYIERIASAASRFGLCKIIPPDSFKPDCQLSDEIRFNAYNQYVHRMLNRWGPNTKELCAIKKYLTTQNISMVHPPWIGGMEVDLPRLYHTVQELGGLKDVIEKKKWTKVAEEMCIPKTAHDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREAKARRNADRCMNSESVSNDGSDDEDESEDSDSGDIMECLVKGRSMPLSAFFRIARNTMSVWFKNSEPDTSEIEAEFWRHVAVRDCHICVHSGSIDSSGWGYGFPTPGPKSKSSPCAKHPWNLKVLTNHSGSILRSLGPVMGVTVPTLQFGMLFSGCCWYRDPHGLPWIEYLHTGASKIWYGVPDEQSTNFRSALVKLVPTHCQNKTIWLPSDTAMVPPYMLTEKNVSLCRTEQLPGEFVVVFPRAYTSSVCTGYVVSESVYFATNSWLETAKQDFKDIEESCEPVVFSLEQLLFAISSDTRSNYETLVQILPMATEMYEKEVELRRKLKAVGITKVEKLVIPKNRKQVTEENECDICRANLYISLVKTEEEGAIYCIPHAIKYIKNNRLTAPNCKLIYAYSVEEIDQMLEGLRERINQQKHKLNTKKQSQGSNRYGKY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01457121;
90% Identity
iTF_01455453;
80% Identity
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