Tver062807.3
Basic Information
- Insect
- Tipula vernalis
- Gene Symbol
- osa
- Assembly
- GCA_958295665.1
- Location
- OY282559.1:6712535-6722246[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9 1.7e+05 -3.6 0.0 27 47 203 223 194 226 0.78 2 2 4.3e-24 9.5e-20 74.1 0.0 3 89 420 506 418 506 0.91
Sequence Information
- Coding Sequence
- ATGCCACCACGTCCTTCTAGTAGTCATTCCCAGGTCCCGAATCAAACACAATCGTCGaataatagtagtaataataacagtaatagtagtaatagtagtaataataatagtaactcAAATCAAAATAACCAACAACCGCCATCGTCATTAGATCCTGCATTAGCACCATCATCAGTACGTCCGCCACCAGCATCTGTAACGCCAGCATCTGGCGGTGGGGGAGCTCAAGCAGGAGGTATGACAACAGCACAAGGTAGTTACCAAGCACCACCGCCACCACCATCTCATATGCATGGCTACAAAATTCAGCCTCAATCCGGTCCTCAAAATATGACTCCATATCCCACCCAATCACCATCACAGTATTCAGGAgGAAATTACTCGCCACGGTCTCATTATCCGGGAAATTATGGCCCACCACCAACGGGTCAACCGCCAAATTCCATTAATATGCCTCCAGGTCCAACACAATATGGCCCTGGTAGGCCAATGTCAAATCCTGTATCATTTCCTCCTTATCCACAAAATTGGGGTCCGCCAGCACCACAGGGTGGTATGATTGGTAATCATGTTCCAGGTAAAAGTGCGCCACCACCATCGTCGCCAGGTGGTTCACCGAGACCATTGACATATTTAAAACATCATCTTCAGCATAAAGGTGGGTATTCAGGTGCTCAAAGTCCCACGCCTCCTCAGGTATATGGAAATGGACCTGGTATGCATCCGCCAATGGCACCTCCACCTCATATGGGTCCACCAATGGGACCAACAAATATGGGTCCACCATCGTCTGCACCTCAGAATCAACCACCATCATCTGGACCAAATAGTCATCCTGACGGAAGTATACCACCTCCACATTCCGACAGCTCCCAAGATAATGGAATTAATTCATCAAATAATACATCACATCCTGTTACCTCAATTGTTACAACGGGGCCAGATGGCACACCGTTAGACGAAGTTAGTCAGCAGAGTACACTGTCAAATGCATCAGCTGCTTCAGGCGAAGATCCACAGTGTTCAACgccaaaatcaagaaaaaatgaaTCATATAATCAAACACATTTAGCACCGCCAACTGCATCTCCTGGTTCACATGGCCCGCATGAAGATTTTGAAATGGGTTCACCATCGTGGCCAAGAACACCAGCTAGTCCCGTTTTTAATAGTCACGTACCGCAAGAGACGTTTCGAACGTCGAAAAAATCCGATAGTCTATGTAAATTATATGAGATGGATGACAATCCAGATCGTCGAGGCTGGTTAGATAAATTATTAAGCTTTATGGAAGAAAGACGTACTCCAATTACGGCATGTCCAACAATATCAAAAACTCCACTCGATTTATTTAGGTTATATTTGTATGTGAAAGAGCGTGGTGGTTTTGTTGAAGTGtgcaaaGTTACCAAAAGTAAAACATGGAAAGATATCGCTGGTTTGTTAGGAATTGGTGCTAGTAGTAGTGCAGCATATACTCTAAGAAAACAttatactaaaaatttattagccTATGAATGTCATTTTGATCGTGGTGGCATAGATCCATTACCGATTATTCAACAAGTGGAAGCTGgttcaaaaaagaaaacaacaaaagcAGCGTCTGTTCCTTCACCAGGATCGTCAAACAGTCAAGATTCATTTCCAGCACCTGGTTCAAGCAGTGCCAGTATGGATGGCTATGGTGGTTATCCTGGAAATTATCCACCAGGTCAAGCGCCTAGTGATTATAATTCACCAACAATGCAAAGGCCACCGTCTCAAAGTAATACACAATCACCACATCCAGgtAATGCACCACCTGCTAGTGGCGACAATATCAGTGTGAGCAATCCATTTGATGATCCAGTTGGTCCCCCACGCGCCCCGTATCAACAGGGTGCTCCATATCCCCCTGTATCGCGACCACAAGGTGCTCCATATCAGggacaacaaaattataatcaataCGGTACACCGGAACAATATCCGCCACAAGGTCCGCCGGGAAATTATCCACCGGCACAAGGGCAATTTCCTAATCAAAATAGAACCATGTATCCACCTTATGGACCTGAACCAGGACCTGAACcAGTCGCACCACCATCTACTGGTGCTCCACCACCACCCACGACTGATCCATATCGAGGATATTCAGGAGCTCCTAGTCCATACTCTCCACCACCACGACCATACTCACAACAACCTCCACCAGGTCCAACACAGACTCAGGCTCCAACAACCGCACCACTACCAGGAGCAACAACTCCAGGTGCACCACCGCCTGGTACATATCCACCACCACCCGCACAACCAGACTACTATAGGCCACCAGATCaatcaCCCCAGCCAAGAAGGCATCCTGATTTTACAAAAGATCAACAGTCATATTCACCTTATCCTCCAAGACCTCCAATGTATGctGCATGGCCAAATAATTCAAACCAGTTTAGAGTACAATATCCACCACAAGGTGGACCACCACAACAGTGGCCAGCTGGTCAAAGGCCTCCAGGTCCTCCTGGACCATCACAAGGTCCAGGACCTGGACAATGGGATCCAAATAGGTATATGAATCCAAATCAACCATCGTATCCACCCAATCAACCGaacccgcAATGGAATAATATGCCACCACAGCCTGGAGTTGGTCCTACTTCACCATTGCGACCACCTCAGCGCGGAGGAAAACCATTTCCCATGCCACAACCGCAACAGGGTTCAAAACCCGTTCAAGGTGGGCCATTTCAGGCATCCGGCCTACCACCAAAACGGGATATAGTATTTCCAAATGATAGCGTTGAAGCAACAACTCCAGTATTATATAGGCGGAAACGTCTTTGTCGTGGTGATGTAGGCCAAAGTGATGCATGGAAAATATTTATGGCGTTACGATCAGGATTATTAAGTGAAAGTACATGGGCACTGGATGTTCTAAATATATTACTATTCGATGATTCATCAGTACATTACTTTGGTCTATCGCATTTGCCAGGGTTACTTAATTTGTTATTGGATCATTTTCAAAAGAGCCTGTCTGATATGTTTGATACCGATTGTGATAATACCAGTACTGACGAAATTAAacccacaacaacaacaatacgaACTACtagtatttatataaaatcatcaaattatctaaatagtaataataacaatagtaaCATGAGTAATGCAAATTTAGTAAACAACATCAATAGTATtagtaatttgaaaattgatgaaAAGGAATACGTTGATTTAGGTTCTGTAATGGATATACCAAAAATTGAAGATCGAATCCTTGTAATGCAATCGGCAAATAATTATACATTTAATACACGAAAAGGTTTACCGgttaaaattgtaacagccGAAGATGATATATTTGTTACAGATTCAATTCGACAATGGGATTtagattcaaataaaaattatcatttattaaCGTCGGTTGGAAATGATCCATGGACATATGGGCATACAACACCTGAACCTCATTCATATATAATGGATTGCTTTAAAGCAGAAATAATAAACATTCCATTTACATCAATTAATAATGGTGATAgtataaataatagtaatagtaataattataataatacaaatattagggcaaaattaaataataaaatggataataGTAATGATGATATAAAACCAACGATAATATCATTACAAGCGGCAGTTGTGACTGCAAATTCAtctccaacaacaacaacgacgaCGATACACAGTAgcagtagtaataataatagtaatagttgtattagtaatataaataataatagtaatacatcatcatcatcaactgGGTCATCATCAAATCATAGTGATAGtagtaatttgttattattaaaaaaagaaccaatGGATAGTGATTGTAGACATATTGATATGGAACTAGAACGAATACCAAATGGACCGCAAATATCGAATGACgatgaaaatacaacaaattcatgtgatgacataaaatcaaaattatcatcattagacagtaaaaatttaattagtaaatttgaatttgatgttAATTCCAGTATTATTGATCCGGCAGCTACATTAAAACGTCGTCGCATAAGCGATTACGAGGATGAATGTTATACAAGGGATGAAGCAAGTTTATATTTAGTTACTGAAAGTCAAGATTCATTAGCTAGAAGATGTGTTTGTTTATCaaatatattaagaaatttaacatttgtTCCTGGCAATGAATCTGAATTTGTTAAGTCatcaacatttttatcaatattagGTAAACTTTTATTATTGCATCATGATCATCCTGTGCGAACACCAAAAACACGAAATTACGATCGTGAAGAGGATGCCGATTTTGCTGATTCATGCAGCAGTTTGCAAGGTGAAAATGAATGGTGGTGGGACTATTTGATACAAATACGTGAAAATATGCTTGTGATTGCGGCAAATATATCCGGCCAAATGGATTTATCACGATATGATGAATTTATTACACGGCCTATATTAGATGGACTATTGCATTGGGCGGTTTGTCCGTCTGCCCATGGTCAAGATTCTTTTCCAACATGCGGTAATAATTCACCTTTATCACCGCAACGTTTGGCTTTGGAAGCGCTTTGTAAATTGTGCGTGACCGATGCAAATGTTGATTTGGTGATCGCTACGCCACCATTTTCTCGGCTGGAAAAATTATGCGCTGTACTTACAAGGCACTTGTGTCGAAACGAGGATCAAGTATTACGGGAATTTTctgttaatttattacattatttggCTGCGGCTGATAGTGCAATGTCACGAACTGTGGCAATGCAGAGTCCCTGTATATCATATTTAGTTGCATTTATTGAACAAGCTGAACAAACAGCACTGGGTGTAGCCAATCAGCATGGTATAAATTTTCTACGAGAAAATCCTGATTCAATGGGCACAAGTTTGGATATGTTACGAAGAGCGGCGGgtacattactgcatttagcaAAACATCCTGATAATCGGCCGCTATTTATGCAACAAGAACAACGGCTCCTTGGTCTCGTCATGAGTCACATACTTGATCAACAAGTTGCATTAATTATTTCACGTGTATTATTTCAAGTATCAAGGGGTGTTGGTCCTCTTATGACTTCCGAAATAAATACTCCCTTTCAACCAAGGCCGCAATCAACCTCATCTAATAAAGCAACTGCTATCGTATCGTCGTAG
- Protein Sequence
- MPPRPSSSHSQVPNQTQSSNNSSNNNSNSSNSSNNNSNSNQNNQQPPSSLDPALAPSSVRPPPASVTPASGGGGAQAGGMTTAQGSYQAPPPPPSHMHGYKIQPQSGPQNMTPYPTQSPSQYSGGNYSPRSHYPGNYGPPPTGQPPNSINMPPGPTQYGPGRPMSNPVSFPPYPQNWGPPAPQGGMIGNHVPGKSAPPPSSPGGSPRPLTYLKHHLQHKGGYSGAQSPTPPQVYGNGPGMHPPMAPPPHMGPPMGPTNMGPPSSAPQNQPPSSGPNSHPDGSIPPPHSDSSQDNGINSSNNTSHPVTSIVTTGPDGTPLDEVSQQSTLSNASAASGEDPQCSTPKSRKNESYNQTHLAPPTASPGSHGPHEDFEMGSPSWPRTPASPVFNSHVPQETFRTSKKSDSLCKLYEMDDNPDRRGWLDKLLSFMEERRTPITACPTISKTPLDLFRLYLYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPLPIIQQVEAGSKKKTTKAASVPSPGSSNSQDSFPAPGSSSASMDGYGGYPGNYPPGQAPSDYNSPTMQRPPSQSNTQSPHPGNAPPASGDNISVSNPFDDPVGPPRAPYQQGAPYPPVSRPQGAPYQGQQNYNQYGTPEQYPPQGPPGNYPPAQGQFPNQNRTMYPPYGPEPGPEPVAPPSTGAPPPPTTDPYRGYSGAPSPYSPPPRPYSQQPPPGPTQTQAPTTAPLPGATTPGAPPPGTYPPPPAQPDYYRPPDQSPQPRRHPDFTKDQQSYSPYPPRPPMYAAWPNNSNQFRVQYPPQGGPPQQWPAGQRPPGPPGPSQGPGPGQWDPNRYMNPNQPSYPPNQPNPQWNNMPPQPGVGPTSPLRPPQRGGKPFPMPQPQQGSKPVQGGPFQASGLPPKRDIVFPNDSVEATTPVLYRRKRLCRGDVGQSDAWKIFMALRSGLLSESTWALDVLNILLFDDSSVHYFGLSHLPGLLNLLLDHFQKSLSDMFDTDCDNTSTDEIKPTTTTIRTTSIYIKSSNYLNSNNNNSNMSNANLVNNINSISNLKIDEKEYVDLGSVMDIPKIEDRILVMQSANNYTFNTRKGLPVKIVTAEDDIFVTDSIRQWDLDSNKNYHLLTSVGNDPWTYGHTTPEPHSYIMDCFKAEIINIPFTSINNGDSINNSNSNNYNNTNIRAKLNNKMDNSNDDIKPTIISLQAAVVTANSSPTTTTTTIHSSSSNNNSNSCISNINNNSNTSSSSTGSSSNHSDSSNLLLLKKEPMDSDCRHIDMELERIPNGPQISNDDENTTNSCDDIKSKLSSLDSKNLISKFEFDVNSSIIDPAATLKRRRISDYEDECYTRDEASLYLVTESQDSLARRCVCLSNILRNLTFVPGNESEFVKSSTFLSILGKLLLLHHDHPVRTPKTRNYDREEDADFADSCSSLQGENEWWWDYLIQIRENMLVIAANISGQMDLSRYDEFITRPILDGLLHWAVCPSAHGQDSFPTCGNNSPLSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMSRTVAMQSPCISYLVAFIEQAEQTALGVANQHGINFLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRPLFMQQEQRLLGLVMSHILDQQVALIISRVLFQVSRGVGPLMTSEINTPFQPRPQSTSSNKATAIVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01051710;
- 90% Identity
- iTF_01054104;
- 80% Identity
- -