Tver166693.1
Basic Information
- Insect
- Tipula vernalis
- Gene Symbol
- ARID4B
- Assembly
- GCA_958295665.1
- Location
- OY282560.1:302355746-302367162[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.4e-28 2.1e-23 85.9 0.0 1 89 295 381 295 381 0.96
Sequence Information
- Coding Sequence
- ATGGATGATCCCCCTTATTTGTCTGTTGGTACGGAAGTGAGCGCTAAATATAAGGGGGCATTTTGTGAGGCTAAGGTACGCAAAGTGGTGCGTAATATAAAATGCAAGGTCGCCTATAAGCAAGGACTTGGTACTGGTACGGTTTCGGATGATCAAATCAAGGGGGATATACTAAGAGTAGGCGCTGTGGTTGAGGTAAAACATCCGGATCGACGTGATTTTGTTGAAGCAACCATAACAAAAATACAAGATTGTTCCCAGTATACTGTGGTATTCGATGACGGGGATATAACCACGTTGAGGCGTAGCGCACTCTGTTTGAAGAGTGGTCGGCATTTTAATGAAAGCGAGACGCTGGATCAATTGCCGCTAACACATCCAGAACATTTTGGTAATCCAGTGATTGGAGGGCGGCGTGGTCGAAGTTGTCGGTCACGCCAATTACAAGACGAAAGCTCGGAGGATGAAGATGACCAAGAAtcaaaagaaattcaaatagAAAAAGAGGAGCATATTGGTAAAGTGGTGTGTGTCGAAAGTacggatacaaaaaaaaaggggCCAAAAGAAAATTGGTTCCCAGCTTTGGTGGTGTCCCCAACTACTCAAGACACAGTACGAATACGGGTCAAAGAAGAATACTTGGTTCGCTCCTTCAAAGACGGACGATATTATACCGTTCCCAAAAAGGAAGCCACCGAGTTCACCCGAGAAATGTCCCACAAACAAGATGGTCAAGCAATTCAAGCGGCCCTAGAATATCTAGACAACGATGTCCTTCCGCCGCACTGGGACCGAGATGCTTTATTCGGACTGGGCACCAGTTCAAGTGATTTTGATCAAGAATTCGATTCAGACAGTTCGGACGATGAGCCGCGCGAAGAGAAAGATCATTTCGTTGCGCAACTTTACAAGTATATGGACGATCGTGGCACACCACTAAACAAAGGCCCCAGCATTGTCAACCGCGACGTCGATTTATACCGACTTTTCCGTGCTGTGGACAAACTAGGCGGATACAATCGTGTAACTGGACAAAATCAATGGAAATCAATTGCAATTCGACTTGGATTCAGTCCGGCAACTACAAGTATTACTAACCTAGTTAAACAAGCTTACAAAAAATTCCTTCAAccatttgaagaatttaatcgaaaattggGCTGTACAATGGTTGCCTATCCAAGAGCAAATCGAATAAAGGGTCGCAGCTTGGTGCGTGCTAATTCCGTGGCCTCACCTAAACCGGTCGAACAAAAAGATACCGAAAAGATTGTAAAACAACAGACATCAACGCTAGCCACTCCAATACAAGCTGATGAGTCGGAAAATAACAGCGAACCCGAAACAAAACATCCAGTTAAACGAAAACTTTCAACTGGGAACACTACAAATATAGGTAAAGTTAAAGCTATGGTtgataaatttgacgccaaatcTACTGAGACGGCTTCCTACAAGGAAGCAGATCCTTCACCAACCGTTGATGTAATACCCACGATACCAACATCACGCATGCCCGTATCCAAATTAAGTCAAAAAGTTACAGAAGAACCTCGAACGTCTATATCGACAATTATCTCAACGCCACCTTCAGTAACTTTGAAAAAGGAAAAGGATATTAAAGAGAAAGCTGTCGAAGTTAAGGAAGCTCCTGCTAAAGAAAAGCCGATTCCTATTGAAAAATCGATTAGTAATAGTGGCATCAGTAAAACAGATAAAAATAATGACAAGCGTGGAAGGAAGAAAAAAGATAATGAGCCGcccgaaaaatttgaaaaggccGTGGAAAAATCACAGGAAAAAACTATTGAGAAGAAAGATTTGCCAGCGGAGAGAGATAATCAAAAAGAAGCTACGTCAACAGCAATAACTGATTTTCCGATTGAAGTGGGTGATAAGTTGAAGGTTTATTACCATGAGCAGAAAGTGACATACGAGGCAaaagttattgaaatatctGATCAAGGGACGCCGCTTTATTTGGTGCATTATACCGGGTGGAATACACGTTATGATGAATGGGTGCCCAAAGAGCGAATCGCCGAAAATTTgagcaacaataaaataaagcgaACCAAAAGTAATGCTTCACGAAGTTCTAGCAGCAATAACAGTAATGTCGGTAGTACGACACCAAcatcaaatccaaataaatcgTCGGCCAAACGAGGTCGCGGTGGATCTCGAAGTGATTCGCAACCACCTCGATCAACAACCCCATCATCAGTTGCTTCCAATTCAAGTCGAACCAAATCACCGGCCACACCGGCCCAGAGACGCACTACGCGTGGACAACCAAGTTCGATGCGACGCACTTCAAATAATACTGATATTTCATCGGTTCAGACGGAGTCAGATACCGATTCTGATGAGCCTGTGAAAAAGCCACAAAGTCGTATCTCTACTAACAATTCCATTAACAAAACGAATACTACAACAACTCTTACATCATCTTCACCAAGCATAACGGCTCCATCGATGCATATAGGAGCTAACAGTAGAAGTAGCTCGAGCCAGGATGAGGAAAGTTTTTCTGCTAGTAAAGGAGTGGATTATGATTTAAATCAGATACGTTCAGAACTTAAGGGAATCCGTAAGATTAAATCTCCTTCGCCGGATGTCGAGCGTCTTTTGATTACGAAAATTGAGCCGGACATTAAACAAGAAACTCCTAACGATAAAATGCTATCGGTTAGAGATTTATCGAATCAAACATCGTTACCAACAAAAGCCACATCTTCATGTAGTGATACGAAAAATACTTCATCCGATTTATCCACGGATAGCGAATCACTTGGTGGCGATGATGATTCTCAATCGAGCCTCGATAAAACAATCGCCACCGTTAAAAATGAAGCAAAGTTTGCGCAGTCGGATTCAAAAGGCTCGATAGTTCAACCATCAAGTTTGACTGGAAAAACTCTTAGCATTTTCAGTTCAATAATTGAAAAGCCTGTGCTCAAAGAAATTAAAGCGTTGGTACTCGAGACTGAACGGGATTCCAAACCCGTGTTGGatgttattgaaaaaattgaagagaCCATAACCATAAAACCAAGTATTTTTAGCTCCAAACTAAGTGATTCCATTCTtaatcaaaaaccaaatattgataaaatgcagtctaccataaaaacagaaaagCCTACAATTCCACTGAGCTCgctaaaaactgaaaaaaaaattattatgtcggAGAAATTGAATCgggataaattaattaaagtttcaGCGGAAAAATTACCTTCTAGCATTGGTAGTTCGCTGTCTATTAGTAGTGATAGTGTGAAATTACAGCAGCAACCTGTATGTGATATTTACGAGTTTAAAGAACCTGAACCATTTGAGTATGAAACGACGACGACTCCATCGAAAAAGCAGCCAATTCTGGTCGATAGTTCATCCACATCTAATTTATCGGCTGAGAAGCGATGCGGCAAGGTGCTGGGTGTAAAGACTGAGAAAATTATAGAACTAAAGACTAATTTGAATATTACACCGACCCCAATATCAGTGCCGACTCCATTGCTTGTCGGTGGAAAACGTAAAAAGAACTCTCCAAATAAAGAGCtagatttcaaaagttttaaacaaatcaaaaaagaGGAAGGTATAGGCTCACCAACCGAAGAATATGGTTCCACCCCTGTTAAAATGAATACATCGACATCGAGTTCCTCGTCGATTGAGTCCACATTTGATGTTCTTCGTAAATCACCCAGTTTTAACATGAGAGGCGGTAGTATTCATCCAGGTGAATGTAATACGTTGCCACAACTTTCACCAGCCATAGAATCACTGAATTCACAAATCAAATCGAACTTTTTTAGCAGTAGTATTGATTTTGAATCCACAAAACCTAAATccgacaaaaaattatttgaagatatGTTATGTGACGTTCCATCTACGTCCATGATGATTCCCGTGAAAACCGAAGAAAAAAGTATTATGAAAGAAGCTGTTTCCTCGGCGGATTCAGATTTAGATAGTCCTGTGCACGGCAAAGATTTTGTGCGTGTCAAGGAGTTGTTAACAGTTGAAACATTTGATGATCTCGAGCCGccaaaaatcgagaaaataCCGTCGATTGCAGATCGAGTGTTGAAAGCGTTAAATCAGCAAAGTGGATGTAGTAAGCAGGAGATAAAGCCATCGAGTGAACGAATATTTTCGCCAACCCCGCTTTCAACCAGTAGTAGTTTGACGGCAACTAGTCTTCCATTTAAGCCGCATAATCCACCGATTGTATCCGAGATTGTAAAACCATCTATTATTGACTCTATCCAAACTTCCAAGTCACTAGAAATTCCGTTAATAAGTATAGATACGTATCCTAAAAAATCAATTACGTCTAATCCGATATCAATGTTTTCGGCCAATGTGGGCACATCTAGTTCCACCGATATTTTGGAATCGATATCGCCAAAAAATAACGATCTTAGTGAGacaatacaaaaattagaatCGGCCATTAAGAAAACCATTCCAACTTCAGTGCAACCAGTGAACATCGATCGATTCAATGATGATTCATCCGAAAGTACAGATTCAGAGCAGAGATTAATTATTGAAGATGAATCGCTAAGCTCAGAAACCCAAGGTGTTTTAACGGCAAATTCCAGCACTGGCTGTAGTGTATCGAACCTACCTATTCAATCGCAGCAACCACATCAAGATACTATTGAGTCGGAGAATAATTTCTCTTCAATTAAGTTTAATCATCAGGAGGGTGCAATTTCGATATTCAGTTCAACTCAAAGTACAATAATTCATTCACAGTTGGATAAACAGCAAATGacagcggttgaatttttgactACAGGAATGATTGATCGAGAAAATGAAAGGCTTTCATTACTCCACAATGCGGCTAATAATCAAGATTCGATTTTAAGTCAGGCCCAGCATATAAACCCCTCCACCACCCAAATTAACCTAATGAAGAAGGAAGAATCTCAACCTAATACTCACACCAATAATACATTCCTTCAAGAGCAAACACAACAAAATGAGTCTTTATCAATGTTGCTATGCGAGGAAACCATTCCTGGAAGTCCGGCACCAGTTTGTACAAATACTATTGTATCAAGTGTCGAACAAACTAAAAAGCCATATGATAACCAAGCATATATAACCCAAAATCCACATCCTACCTCTTCCGATATAAAACCGGTGCCAatggaaattgaaaatgatttattaagtGCCGCGAAAacagttgaaataaaaattgaaataaatgcgTTGAGTAGTGAGATTAATGTGAATCCTGGATCTTCTTGCACCGGCGATATAAACAACCCTAATATTATCTCCAGTAAAACTCAAATTAGTGCTCAGAAAAGTGTTAGTGTTAGTAGTGGACAAGGTGTTAGTTCGGTAAGAACAAATAGTAGGACGGGTAGTCCAAGGGATTCGCTTAGTCCCGAAGATAGTAAATCTGAAGGTGAAAGTGATATTAAAAAACGTGAACATGGATTAGAAATTAATCGTATATCACCGAAGAAAAGGCGGCGACAAAGAAAATCGTCCGAATTGGAGAATACTGcccataacaataataataataataatcataataataataccagCAACactgataatgataatgaaaatataaatactaataatacGATTAATAGTTCACATAACACAAGTAATATTAATAACAGTAGTAGTAATACAAATATCAGTGctaataataatagtagtagTAAGCGGAGGAAAATACCACATGCAAGGAAGCACacaaatgGATCAGATAGTGacgataataattttgatgtctCAGCGCTGCAACAGAGGATTTCAAGACGGTCACCTAAACCGTGCCAGTACAATTTCCTTGTTGAGTTTGATGTAACGCTATCAAGTGCACAAAGAATAAAcataatcaaaaagaaaattcaagagGTACGCAAGACTTATAATATGGTTAAAGCTGAGCTAGCGAGCATCGACAGGCGGCGCAAGAAATTAAGGCGTCGCGAAcgtgaaaaaaataaactggCTAAAGCAACGGCCAGttga
- Protein Sequence
- MDDPPYLSVGTEVSAKYKGAFCEAKVRKVVRNIKCKVAYKQGLGTGTVSDDQIKGDILRVGAVVEVKHPDRRDFVEATITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFGNPVIGGRRGRSCRSRQLQDESSEDEDDQESKEIQIEKEEHIGKVVCVESTDTKKKGPKENWFPALVVSPTTQDTVRIRVKEEYLVRSFKDGRYYTVPKKEATEFTREMSHKQDGQAIQAALEYLDNDVLPPHWDRDALFGLGTSSSDFDQEFDSDSSDDEPREEKDHFVAQLYKYMDDRGTPLNKGPSIVNRDVDLYRLFRAVDKLGGYNRVTGQNQWKSIAIRLGFSPATTSITNLVKQAYKKFLQPFEEFNRKLGCTMVAYPRANRIKGRSLVRANSVASPKPVEQKDTEKIVKQQTSTLATPIQADESENNSEPETKHPVKRKLSTGNTTNIGKVKAMVDKFDAKSTETASYKEADPSPTVDVIPTIPTSRMPVSKLSQKVTEEPRTSISTIISTPPSVTLKKEKDIKEKAVEVKEAPAKEKPIPIEKSISNSGISKTDKNNDKRGRKKKDNEPPEKFEKAVEKSQEKTIEKKDLPAERDNQKEATSTAITDFPIEVGDKLKVYYHEQKVTYEAKVIEISDQGTPLYLVHYTGWNTRYDEWVPKERIAENLSNNKIKRTKSNASRSSSSNNSNVGSTTPTSNPNKSSAKRGRGGSRSDSQPPRSTTPSSVASNSSRTKSPATPAQRRTTRGQPSSMRRTSNNTDISSVQTESDTDSDEPVKKPQSRISTNNSINKTNTTTTLTSSSPSITAPSMHIGANSRSSSSQDEESFSASKGVDYDLNQIRSELKGIRKIKSPSPDVERLLITKIEPDIKQETPNDKMLSVRDLSNQTSLPTKATSSCSDTKNTSSDLSTDSESLGGDDDSQSSLDKTIATVKNEAKFAQSDSKGSIVQPSSLTGKTLSIFSSIIEKPVLKEIKALVLETERDSKPVLDVIEKIEETITIKPSIFSSKLSDSILNQKPNIDKMQSTIKTEKPTIPLSSLKTEKKIIMSEKLNRDKLIKVSAEKLPSSIGSSLSISSDSVKLQQQPVCDIYEFKEPEPFEYETTTTPSKKQPILVDSSSTSNLSAEKRCGKVLGVKTEKIIELKTNLNITPTPISVPTPLLVGGKRKKNSPNKELDFKSFKQIKKEEGIGSPTEEYGSTPVKMNTSTSSSSSIESTFDVLRKSPSFNMRGGSIHPGECNTLPQLSPAIESLNSQIKSNFFSSSIDFESTKPKSDKKLFEDMLCDVPSTSMMIPVKTEEKSIMKEAVSSADSDLDSPVHGKDFVRVKELLTVETFDDLEPPKIEKIPSIADRVLKALNQQSGCSKQEIKPSSERIFSPTPLSTSSSLTATSLPFKPHNPPIVSEIVKPSIIDSIQTSKSLEIPLISIDTYPKKSITSNPISMFSANVGTSSSTDILESISPKNNDLSETIQKLESAIKKTIPTSVQPVNIDRFNDDSSESTDSEQRLIIEDESLSSETQGVLTANSSTGCSVSNLPIQSQQPHQDTIESENNFSSIKFNHQEGAISIFSSTQSTIIHSQLDKQQMTAVEFLTTGMIDRENERLSLLHNAANNQDSILSQAQHINPSTTQINLMKKEESQPNTHTNNTFLQEQTQQNESLSMLLCEETIPGSPAPVCTNTIVSSVEQTKKPYDNQAYITQNPHPTSSDIKPVPMEIENDLLSAAKTVEIKIEINALSSEINVNPGSSCTGDINNPNIISSKTQISAQKSVSVSSGQGVSSVRTNSRTGSPRDSLSPEDSKSEGESDIKKREHGLEINRISPKKRRRQRKSSELENTAHNNNNNNNHNNNTSNTDNDNENINTNNTINSSHNTSNINNSSSNTNISANNNSSSKRRKIPHARKHTNGSDSDDNNFDVSALQQRISRRSPKPCQYNFLVEFDVTLSSAQRINIIKKKIQEVRKTYNMVKAELASIDRRRKKLRRREREKNKLAKATAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01454647;
- 90% Identity
- iTF_01455449;
- 80% Identity
- -