Tver003780.1
Basic Information
- Insect
- Tipula vernalis
- Gene Symbol
- Xbp1
- Assembly
- GCA_958295665.1
- Location
- OY282558.1:26466385-26467268[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-17 1.5e-13 53.8 12.0 2 65 59 122 59 122 0.96 2 2 2.4e-05 0.22 14.9 2.6 29 63 100 134 98 136 0.94
Sequence Information
- Coding Sequence
- ATGAGTTTACCAGTTTTAATAACCGTTCCAAAATATGTTCCAATTACAACTGCATCAGAATTACGACATTCTGGTGGTGGTGGAAATTCATCTGGGTCGGATGATTCATCATCTTGTCTGGATGAGTTTTTAGTACGCGGAACAAAGCGTAAACGATTGGATCATTTAACATGGGAggaaaaattacaaagaaagaAGCTGAAAAATCGAGTAGCAGCACAAACATCACGAGACCGCAAAAAAGCCAAAATGGAGGAAATGGAAAGTACAATTGTGGCACTCAAAGAGgataatacaaatttacaatCCCGATGTGACAGCCTACAGGAGCAGAATAATGTGCTCGTTACAAAAAATACAGAACTGGAAAAGCGACTGGGCGAATTAGAGCGTAAATTCGAAATGAGAAGCGCTGAAGTTATTGCGACGAAGAAAACTTACTGTGATGTTGGTTGTGAAACTATTACTGATGGATCTGCCGTATCCAATTACCCTCTGCAGAAGGGAATAGTATCACAAGCAACACTAGAAAGTGTTCAACAACAGCAACCAACAGCCAACTCATTATGGAAGATAATTGCGTTGTGCCTCCTCTACAAGACATGCTCGGAGATTTCGACTTGTCTCGACTTGAAGAGCTTGCCGAAAGCTTACTTGCAGATATCGTCCCAGAATTGGAAGATGATACTCGAGCGAGCAGCAAACGAGTTGCCAAAAATGAAAGCTCCACAATCGGAGTGCCTCGACCAATGGTGGGGACCACAGCAGAAAAGTTGGAACCCAGCAAAGATATCAATCGAAGTATAA
- Protein Sequence
- MSLPVLITVPKYVPITTASELRHSGGGGNSSGSDDSSSCLDEFLVRGTKRKRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKMEEMESTIVALKEDNTNLQSRCDSLQEQNNVLVTKNTELEKRLGELERKFEMRSAEVIATKKTYCDVGCETITDGSAVSNYPLQKGIVSQATLESVQQQQPTANSLWKIIALCLLYKTCSEISTCLDLKSLPKAYLQISSQNWKMILERAANELPKMKAPQSECLDQWWGPQQKSWNPAKISIEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01454609;
- 90% Identity
- iTF_01454609;
- 80% Identity
- -