Tunc010752.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tipula unca
Gene Symbol
-
Assembly
GCA_951394425.1
Location
OX596380.1:147011787-147020927[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 38 2.9e-05 0.0043 18.8 0.5 2 23 98 119 97 119 0.97
2 38 2 2.9e+02 3.6 4.8 2 23 122 140 122 140 0.89
3 38 0.0073 1.1 11.3 0.8 1 23 146 168 146 168 0.94
4 38 0.00058 0.086 14.7 2.7 3 23 176 196 174 196 0.98
5 38 6.2e-05 0.0091 17.8 1.6 1 23 202 224 202 224 0.98
6 38 1.6e-07 2.4e-05 26.0 0.4 2 23 231 252 231 252 0.97
7 38 0.00067 0.1 14.5 2.0 1 23 258 280 258 280 0.98
8 38 0.00023 0.033 16.0 3.1 1 23 286 308 286 308 0.99
9 38 0.11 17 7.5 2.5 1 15 314 328 314 328 0.90
10 38 0.00016 0.023 16.5 3.2 2 23 465 486 464 486 0.97
11 38 0.59 87 5.3 1.9 2 23 489 507 488 507 0.78
12 38 6e-05 0.0089 17.9 0.6 1 23 513 535 513 535 0.98
13 38 0.0028 0.42 12.6 2.9 1 23 541 563 541 563 0.95
14 38 7.8e-05 0.012 17.5 1.3 3 23 663 683 661 683 0.96
15 38 9.8 1.5e+03 1.4 0.4 2 17 686 698 686 704 0.65
16 38 0.01 1.5 10.8 6.5 1 23 710 733 710 733 0.96
17 38 0.0027 0.4 12.6 2.5 1 23 739 761 739 761 0.99
18 38 0.0002 0.029 16.2 1.8 2 23 770 791 769 791 0.98
19 38 7.9e-06 0.0012 20.6 0.3 3 23 799 819 798 819 0.98
20 38 3.3e-06 0.0005 21.8 1.9 1 23 825 847 825 847 0.97
21 38 0.013 1.9 10.5 2.4 1 23 853 875 853 875 0.93
22 38 4.3e-05 0.0063 18.3 2.6 1 23 881 904 881 904 0.98
23 38 0.00041 0.062 15.2 1.9 3 23 1040 1060 1038 1060 0.96
24 38 0.23 35 6.6 0.8 2 23 1063 1081 1062 1081 0.92
25 38 0.0022 0.33 12.9 1.4 1 23 1087 1109 1087 1109 0.96
26 38 0.002 0.3 13.0 4.6 1 23 1115 1137 1115 1137 0.98
27 38 0.00083 0.12 14.3 3.2 2 23 1146 1167 1145 1167 0.98
28 38 7.4e-06 0.0011 20.7 1.2 3 23 1175 1195 1174 1195 0.99
29 38 6e-07 9e-05 24.1 0.6 1 23 1201 1223 1201 1223 0.97
30 38 0.0013 0.2 13.6 2.8 1 23 1229 1251 1229 1251 0.96
31 38 0.00091 0.14 14.1 2.8 2 23 1396 1417 1395 1417 0.97
32 38 0.012 1.8 10.6 0.7 5 23 1420 1438 1419 1438 0.93
33 38 0.0013 0.19 13.7 2.0 1 23 1444 1466 1444 1466 0.97
34 38 3.4e-05 0.0051 18.6 4.6 1 23 1472 1494 1472 1494 0.98
35 38 0.0015 0.22 13.5 3.9 2 23 1503 1524 1502 1524 0.97
36 38 0.00016 0.023 16.5 1.9 2 23 1531 1552 1530 1552 0.96
37 38 4.5e-08 6.7e-06 27.7 0.3 1 23 1558 1580 1558 1580 0.99
38 38 0.011 1.6 10.7 0.2 1 23 1586 1608 1586 1608 0.95

Sequence Information

Coding Sequence
ATGAATTTCCCAGATGATACGGATGAAGTGGAAATCAAAGAGGAACCATCGCTAACCATTTATGATTCACAACTTTACGGAGCGGATGAAGATGTACTTAGTAATTctgttaataaagaaaataatagttttagtaGTGATTATAGTTGCAGCGATGACGATGATGGGGAAGATGATGACGATGAAAGGGAGAAATCATATTCAACAAGTGACGAAGTTAAGGAGCCTGTTTATATAAAGCATGAATTAGATCACGAAAAAGGTGGaagtaacaaaacaaaactgataTTAAAGTGTGAAGAATGTGGCAAGGAATTTGATCGACGGGCTCGATATCTAAGACATATGAACGTGCATAAAAATCGTTGTGAgatttgtgataaaaaatttcacgaTCGTGAAAAGCATATGAAAAAGCACACAggtgaaaaaacatttttatgttcgCAATGTGATGCTAGATTTATTAATATAAGTAGATTAAATCATCATATGATCGGTCATTCAACAGAACGTCCATTTGGATGTGATATTTGTCATAAAACGTTTAAATCGACCGATGGATTGCGTGGACACAAAAAAACTCATTCGACCGAACGGCCACATAAGTGTGATCAATGTGGTAAAGGATTTTTGAATAAAGGTGATTTAACGAAACATCAAAATGTACATACGGGGAGAAAGCCGGCTGTATGCCAGGTATGCGGTAAAGGTTTCTCATCAAACGACTCGCTTAAAGTTCATATGCGAACCCATACGGGTGAAAAACCTTACGAATGTCAATACTGCGGGAAACAATTTAGTTGTTCGAACGTACTAAAAATACACATTAGAGTGCACACGGGTGAAAAaccatataaatgtaaatattgtgAAAAGGCATTTGCAGATTCATCAACATGTCGAGCGCACGAAAGGACTCATACAGGCGATTATCcgtataaatgtcaaatttgtgGGAAAACATGCAATCAATCGAGAAATTCCACAGATACCGttcaaattgaatttccaaGTGTATTTAGTGACCATAGCCCGCCATTATCGTGTGATAGTATTTTTGAGCTAGTGAATTTATTCGAGGAATTTGGAACTGTTTATCCTAGTACAAGGAAACTTGATTTGGGGTTGAATGATGATTACAAAgaTGAGGAATTCGAAATAAAAGTAGAACCACTTAATTTCACATACAATAATGATGGAATTAATGATGAAGACCAATCACAAAGTGAAGAGTACGAGGAAGACGACAATAAACTTGACGCGGAATTGACACTATTTCCCGAAGACCTTAATGATCACGAAATTTGTGATGagataaaaattggaaatactcCAAAATCGGATGTGGTTAATGAATATAGAGAAGAGAATTCTACTAAATTAAcactaaaatgtaaaatttgtcaTAAGGAATTCGATAAGGAAATGTATCTAAATCGGCATATCAAATCACATAGCAAAACATGTGAAATATGCGGCAAGAAATATCAGAACCGTGAGAATCACATGAAAAAGCATTCGGGTGAAAAATCCTTTCAGTGTACAGAATGCGGAGCACGATTTATAAATATGAGTCGATTAAATAATCACATGACATCACACTCAGAAGAGCGGCCATTTGAATGCATCACATgccagaaaaaatttaaatcgcgCGAGCGATTACGCGTACATCAAAAGACACACAATACAGAACGGCCGAATAAGTGTGAAGACACATCAACAATTGAAAATGTGGAAGTAAAAGCTGATCCATATATATTTGCAACAGATTTCAATGTCACTGATAGTTTACAAATACCAGATTACGTTAAAATAGAACACGAATCTGCAAATGAAGAAGAAATTAGAGTAAAAACTGAATATGTTGATAGTGCCAAATCCTATTCGTCAACTGAAAGTGAAGAGGATGTGAATGAAAATTGGACTGAAGACAAACGGGAGACCGAGCGAAAACCCATGACTGGTCGTTTGCGAATAAATTGTGAACACTGTGAAAAAGTCTTTAATCGCAACTGGGCATATGAACGACATCGAAAAGTTCATGAAAACACttgcaaaatatgtaataaacgaATTATTAATATGAAGGCGCATATGGAAGCACACGATGGCGTATTACGGCACGAGTGCAAAATTTGTCACCAGCGGTTTAAATTTAAGGATCGTTTGAATAATCATACTGCCACTAAACATTCCGAAGAGCGTCCGTTTAAATGTGATATATgccaaaattcttttaaaataaaagatcgACTGCGTGAGCACAAGAAAACTCATATGCCGATGGAGAAACGGCCAAAAAAATGTGATACATGCGAAAAACGTTTTTTGAACAATGTTGATCTGAGACGACACATTCGAACACATACGGGGGAAAAAACTACATTATGCAATGAGTGtggaaaagcttttaaaactaATTGGGAATTAAAAATACATGGACGCATGCACAGTGGTGAAAGGCCACATAGTTGTGAAATATGTGGTAAAACGTTTGTGCGGAATACAACATTGGTTATCCATAGACGGCGACACATGGGCGAGAAACCGTATAAATGTCGTTATTGCGAAAAAACATTTACTGATTCTGGTGGGCGTAGTATGCATGAACATGTTCATATAGATGATCGACCTTACAAGTGTCACATATGCAACAAAGCATACAACTTTGGAAGCAGTTTAAGATCGCACATGAAAATTAGTCATTCCTATGTGTTAACCGAATTTCCAaatcaatttatcgattatgATTTACCGAGTGAAGATGAAATACAACAATTTGTGAAATTATTCGAAGATTTTGGGAGTGTTTATGGGTCGTATAATGCCAAGGATGAACTTGAGCcagatataaattatatcAATAGATCAACAGTTGAAAATGTAGAGGTTAAAGTTGAACCAGATATATTCGAAGTAGATTTCAATATTACTGACAGTTTAGAAATCTCAGGTAATGAAAAAGAATTGGAAAATGACGACGATATCGAAGTAACAAAAGATGATTCAGAAAGTGATCAATCAAAGTCTGTATCTGAGAGTAATGAGGAAGAAGAGTGGGTTGAAGCAACTTCAGAACGAAAACCTACGAGGGGTGGTTTACGTATAAATTGTGAGGATTGCAATAAAGTCTTCAAACGTCATGTCCTATATGATCGCCATCGCCGAGCTCATTTAAACACATGCACAATATGTAATAAACGAGTTGTTAATTTAAAGGTCCATATGCAAATGCATGAAGGCATATTACCCTACGAATGTATTGTTTGTCAGcagcgatttaaatttaacgatcgtTTGAAAAGACACATGGCCACACATTCCGAGGTGCGTCCGTTTAAATGTGAAACatgtcaaaattgttttaaaacgaAAGATCGACTACGTGAACACGTTAAAATACATATGCCAATGGAAGAACGGCCTAAAAAATGTCACTTGTGTGAAAAACGGTTCTTGAACAATGTTGAGCTGAATCGACACATTAGATCACACACGGGAGAGAAACCAACATTGTGCAATGAGTGTGGAAAAGGTTTTAGAAcactttatcaattaaatatgcaTAAACGTACTCACACTGGAGAAAAGCCACATAGTTGTGATATTTGTGGTAAAACATTTTCACGAAATGCTGGTTTGATTATTCACCAGCGCCTGCATACCGGCGAGAGACCCTATAAATGTCGgtactgtgataaatcgtttacTGATTCAGGTGGCCGTAAAATGCATGAACATGTTCATCTAGATGACCGGCCTTATAAATGCAATTCAACAGACAAAGTTCAAACTGAATTTCCTACTAAATTTATCACTAAAGATTCACCAACATGTGAACACATAAtagaattaatcaatttttttgaagaaaatggcAAAGTTTGCGAATGTGGATGTAGAAGGGAAAAAAACCTCGAGTTGAACTATGcgGATGCTAAATCATATGAATTCCCAGTCAAAAAGGAAGAAATAGATATTGTTGATAAGATAAAGCTAGAAAATGATAATGAAATGCAATCGCAAAATGAGGAAACCCAAGATTTATCAGCTTCTCAAGAATCATACGACGATACCGAAGAAGACAATATAAATGAACAAATGAGTGAAACCGAAGAGAATATAGGTAATAAAAAAGAAAGCTCACTTGCCAAAACAAAAGAGGTCCGTCAAGATTTAAAATGCAAACAATGTGAGCGCCAATTTAACCGACGCGATAAATTCCGTGCCCATTTGGAGAAACACGAAAAGGAATGCAAAATATGTGGGAAACGACCTCGCAATCTTGAACAACACATGCGGTACCACACAGGCGAGAAAGGGTTTGTTTGCTATGTATGCGGTCTGCAATGTTTTAAACCCGACCAATTATTTTCTCATATGCGATCACATCAGAAAGAAAGACCGTTTTCTTGTGTAACATGCAATAAGGGGTTTAAATCTAAACAACATTTGAATCGACATGTTAAAACTCATGTACCATATGATAAGCGCCCAATTCAGTGTGACGTCTGTCAAAAACGATTCTGCTTTCAACGAGAGCTTAATTTGCATAAGAAAATGCACTCGGGTGAAAAAACGTGCTTCTGTAAAGAATGTGGTTTGGGATTTACTAGCAATTGGTCGCTGAAAATGCATGCACGAACTCATACTGGTGAAAAACCATTTCAATGTGATTATTGTGATAAGGCCTTCAGTAGGTCAGGCAGTTTAAACATTCACATTCGAATACACACGGGAGAAAAGCCATACAGTTGCCAGATTTGCAACAAAGCGTTTTATGATGCTGGTTCACGGGGTGTACacgaaaataaacataaaatgaagagctaa
Protein Sequence
MNFPDDTDEVEIKEEPSLTIYDSQLYGADEDVLSNSVNKENNSFSSDYSCSDDDDGEDDDDEREKSYSTSDEVKEPVYIKHELDHEKGGSNKTKLILKCEECGKEFDRRARYLRHMNVHKNRCEICDKKFHDREKHMKKHTGEKTFLCSQCDARFINISRLNHHMIGHSTERPFGCDICHKTFKSTDGLRGHKKTHSTERPHKCDQCGKGFLNKGDLTKHQNVHTGRKPAVCQVCGKGFSSNDSLKVHMRTHTGEKPYECQYCGKQFSCSNVLKIHIRVHTGEKPYKCKYCEKAFADSSTCRAHERTHTGDYPYKCQICGKTCNQSRNSTDTVQIEFPSVFSDHSPPLSCDSIFELVNLFEEFGTVYPSTRKLDLGLNDDYKDEEFEIKVEPLNFTYNNDGINDEDQSQSEEYEEDDNKLDAELTLFPEDLNDHEICDEIKIGNTPKSDVVNEYREENSTKLTLKCKICHKEFDKEMYLNRHIKSHSKTCEICGKKYQNRENHMKKHSGEKSFQCTECGARFINMSRLNNHMTSHSEERPFECITCQKKFKSRERLRVHQKTHNTERPNKCEDTSTIENVEVKADPYIFATDFNVTDSLQIPDYVKIEHESANEEEIRVKTEYVDSAKSYSSTESEEDVNENWTEDKRETERKPMTGRLRINCEHCEKVFNRNWAYERHRKVHENTCKICNKRIINMKAHMEAHDGVLRHECKICHQRFKFKDRLNNHTATKHSEERPFKCDICQNSFKIKDRLREHKKTHMPMEKRPKKCDTCEKRFLNNVDLRRHIRTHTGEKTTLCNECGKAFKTNWELKIHGRMHSGERPHSCEICGKTFVRNTTLVIHRRRHMGEKPYKCRYCEKTFTDSGGRSMHEHVHIDDRPYKCHICNKAYNFGSSLRSHMKISHSYVLTEFPNQFIDYDLPSEDEIQQFVKLFEDFGSVYGSYNAKDELEPDINYINRSTVENVEVKVEPDIFEVDFNITDSLEISGNEKELENDDDIEVTKDDSESDQSKSVSESNEEEEWVEATSERKPTRGGLRINCEDCNKVFKRHVLYDRHRRAHLNTCTICNKRVVNLKVHMQMHEGILPYECIVCQQRFKFNDRLKRHMATHSEVRPFKCETCQNCFKTKDRLREHVKIHMPMEERPKKCHLCEKRFLNNVELNRHIRSHTGEKPTLCNECGKGFRTLYQLNMHKRTHTGEKPHSCDICGKTFSRNAGLIIHQRLHTGERPYKCRYCDKSFTDSGGRKMHEHVHLDDRPYKCNSTDKVQTEFPTKFITKDSPTCEHIIELINFFEENGKVCECGCRREKNLELNYADAKSYEFPVKKEEIDIVDKIKLENDNEMQSQNEETQDLSASQESYDDTEEDNINEQMSETEENIGNKKESSLAKTKEVRQDLKCKQCERQFNRRDKFRAHLEKHEKECKICGKRPRNLEQHMRYHTGEKGFVCYVCGLQCFKPDQLFSHMRSHQKERPFSCVTCNKGFKSKQHLNRHVKTHVPYDKRPIQCDVCQKRFCFQRELNLHKKMHSGEKTCFCKECGLGFTSNWSLKMHARTHTGEKPFQCDYCDKAFSRSGSLNIHIRIHTGEKPYSCQICNKAFYDAGSRGVHENKHKMKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-