Tunc025796.1
Basic Information
- Insect
- Tipula unca
- Gene Symbol
- Csrnp2
- Assembly
- GCA_951394425.1
- Location
- OX596381.1:147888911-147893639[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-53 2.1e-48 166.6 15.1 126 218 23 115 14 115 0.98
Sequence Information
- Coding Sequence
- ATGTTTCGTTTCACGTTCGGTATTCGTTTTGTTGTGTGTATCTGTATGAGATATGAAATTTCAGAcaaaGCGGCTGGGATACGGAAAATTGATACAACCGAAAAGGATGAGTGCCGCGTGATACGCAGCTCACGAGAGATTTGTGGATGTACGTGCCGGGGATATTGTGATCCAGATACATGTTTTTGTAGCCAATCGGGGATTAAATGTCAaGTTGATCGGCCAAACTTCCCATGCGGATGTACGCGTGATGGTTGTGGAAATGTAATTGGCCGAGTTGAATTTAATCCAGGACGTGTACGAACACATTTTATACACACAATAATGCGAATTGAACTTGAGAAGAAGCAAATGAGTTCAGATGATTGTGATAATGCAATAGTGAATCGTGTTGGTCCAAGCACGCGATCATGGATGCCACCAATTCGATTACCAATGCTTGGCTTAACGCTTCCAGCCAGTGAGTATCATAGTCATCATTCAATGGTTTATAGTCAAAATGAATTAACGGGCGGTGGTGGCACAACTAGCGTTGTTGGTGATATATCTACTCGACCTAGTACGACATCCGTTGTTGGAGCAAATACTGAATCACTTGATTTACATTATGCATATCGAGACGAGTATTCATCAACACCAAATCCATTAGATAAAAGCCCCTATCACCATGCACAAAATAGTCTAGTATATCAAACACATCATTACAATACGTATACGACTCCTGATTATGTCGATACATCACAAAGCTTTCATGCAACACCCAGTTATGAGCATCACGCTACAACACATCATGTGCACCCATCATCACATGAAGGGGACACAAATTATTTGCATTCCGCATTCGATATAAATCCACAACAGCCTACAGTAGGCCCTATAACTAGTGATATGCCCGCATTAAATGTAGTGGCCAACAATAATATTAGTACCGATACAGATGCAACTTCAACTATTGCGATTAATATAAGCAATAGTAGTTTTAATAGTGACGAATTAAATACCAATAGTGATACTAGTAATGAATTAATCATTAGTGATTTGAATAGTAGTAGTAATGCCATTGTTACTACAACTATTACTACCATTGCTACCGatagtgattttataaatttgcatcCTCCTGCTACAAATTCACCACGGATGGATGCAATCAATGATTTACTTGAAAGTAATCGGTACTCATCGACCATCGTAACTCCAATTGATGATGGCAATATAGTAAATGCTGTGGATACGACTTTAATTGATAATGAAGCTGATAATGAATCGACCACACCAATAATCGAGACGGCGAATTGTAATAGTACTCTAGAGACTACTATAGATTtagataatacaaataataatacaactgttataaataaaaatgaaaataaactatTGTTACATCATTGTGATgatataaataatagaaatgtAATTAGTAATAGTAGTAATATAGCAGATGGTAATGATCGTAATAATAGTGGCGGTGATCATACACTAACCACTGACGACGATacgaataatgaaaatttaagtgaaattattaagaAGAGTATTGTTGAAATTGTAGCTTAG
- Protein Sequence
- MFRFTFGIRFVVCICMRYEISDKAAGIRKIDTTEKDECRVIRSSREICGCTCRGYCDPDTCFCSQSGIKCQVDRPNFPCGCTRDGCGNVIGRVEFNPGRVRTHFIHTIMRIELEKKQMSSDDCDNAIVNRVGPSTRSWMPPIRLPMLGLTLPASEYHSHHSMVYSQNELTGGGGTTSVVGDISTRPSTTSVVGANTESLDLHYAYRDEYSSTPNPLDKSPYHHAQNSLVYQTHHYNTYTTPDYVDTSQSFHATPSYEHHATTHHVHPSSHEGDTNYLHSAFDINPQQPTVGPITSDMPALNVVANNNISTDTDATSTIAINISNSSFNSDELNTNSDTSNELIISDLNSSSNAIVTTTITTIATDSDFINLHPPATNSPRMDAINDLLESNRYSSTIVTPIDDGNIVNAVDTTLIDNEADNESTTPIIETANCNSTLETTIDLDNTNNNTTVINKNENKLLLHHCDDINNRNVISNSSNIADGNDRNNSGGDHTLTTDDDTNNENLSEIIKKSIVEIVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -