Tunc013509.1
Basic Information
- Insect
- Tipula unca
- Gene Symbol
- kn
- Assembly
- GCA_951394425.1
- Location
- OX596380.1:188306922-188328710[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-118 3.3e-114 383.8 0.0 205 385 1 209 1 212 0.99 2 2 9.9e-09 0.00025 21.0 13.7 422 503 212 296 208 326 0.68
Sequence Information
- Coding Sequence
- ATGCGACGATTCCAaGTGGTAATAGCGACCCAGGTGTCTGTGGAAGGACCATTATTAGCAATATCCGATaatatgtttgtacataataATTCGAAACATGGCAGACGGGCGAAGCGTCTTGATCCAACGGAAGGTACAGGAAATTCGCCATTGGCTATTTCTGGGCATCCCCTAGCACCAGATAGTACGTACGACGGTCTATATCCACCACTGCCAATAGCACAACCATGTATCAAAGCAATATCGCCCAGCGAAGGTTGGACCACTGGCGGGGCACAGGTCATAATTGTTGGTGATAATTTTTTCGATGGTTTACAAGTGGTTTTCGGTACGATGCTAGTGTGGAGCGAATTAATAACATCGCATGCGATTCGGGTGCAAACACCACCACGTCATATACCCGGGGTCGTTGAAGTTACATTATCGTATAAAAGTAAACAATTTTGTAAGGGATCGCCGGGAAGATTTGTGTATGTTTcgtTAACTGAACCGACAATAGATTATGGTTTCCAAaggttacaaaaattaatacctCGACATCCGGGGGATccagaaaaattaccaaaagaGATTATATTAAAGCGTGCAGCCGATTTAGCCGAAGCTCTTTATTCAATGCCACGATCGCCAGGCGGATCGACCGGATTTAATTCGTATAGTGGACAATTGGCGGTCAGTGTGCAAGATGGTGGTGGACAATGGGGTGAAGATGATTATCAGCGAGCACAAAGTAGTAGTGTTAGTCCTCGTGGAGGATATTGTAGTAGTGCATCGACACCTCATTCGTCCGGCGGTGGATCTTATGGTGGTGGTGGTAATGGTTATGGGCCAGCCCCGAATATGGGCGCCCTATCATCATCACCGGCTAGTGTTTTTAATTCGACTTCAAGAGGACTTGTGAATGGTTTTAATCCATTCTCGTTGCCAACATGCAGTACTCAAGGATATACATCAAGTCCTCTAGTCACATcatcaaaataa
- Protein Sequence
- MRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTGNSPLAISGHPLAPDSTYDGLYPPLPIAQPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLTEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSPGGSTGFNSYSGQLAVSVQDGGGQWGEDDYQRAQSSSVSPRGGYCSSASTPHSSGGGSYGGGGNGYGPAPNMGALSSSPASVFNSTSRGLVNGFNPFSLPTCSTQGYTSSPLVTSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455729;
- 90% Identity
- iTF_01163736;
- 80% Identity
- -