Tlat016778.1
Basic Information
- Insect
- Tipula lateralis
- Gene Symbol
- pnr
- Assembly
- GCA_963932295.1
- Location
- OZ010737.1:83325633-83327094[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-18 2.2e-14 53.8 3.2 1 34 120 152 120 154 0.97 2 2 2.6e-19 2e-15 57.2 5.1 1 35 174 207 174 208 0.98
Sequence Information
- Coding Sequence
- atgTTTCACTCAACAACCGCCTACTCGGAGATGTCACCCGTAACAGGATCTGTCCCTAATGTTTCATATCATCAATCACAAGCGGGTGCACCAAACACTCCCGTATATGTTCCTTCTAATCGTGCTATACCGCATACACAATATCCTACTGGAGCTCATTTTACTGGTGCCGTGGCAGCAGCTGCACAAAATGGTTGGACAACGGATAGTTTTAGTACGGCACATTCACAATTGCCGCCACAATTTTACGCTCAAAACGCGGTTATGATGAGTTCATGGGGTGCCTACGATCGTGGATTTCAACGTACATCGCCATATGATAATGGAATGGATTTTCAATTTGGCGAGGGCAGAGAATGTGTTAATTGTGGAGCTATTTCGACACCGTTATGGCGACGGGATGGCACTGGCCATTATTTATGTAATGCATGCGGATTATATCATAAAATGAATGGTATGAATCGACCATTAATTAAACCAAGCAAAAGACTGacTGCTACCCGACGTTTGGGCCTTTGTTGTACTAATTGTGGTACACGAGCAACCACGCTGTGGCGCCGCAACATGGAAGGTGAACCAGTTTGTAACGCATGtggattatattataaattacatgGCGTAAATAGGCCATTAGCGATGCGAAAGGATGGAATTCAAACGAGGAAACGTAAACCAAAAAAGTCAGGCAGTGGTGGCGGATCACAAAATTCAGATTTAATGATGGgcaaaaaagaagaattaagcgatgAAATTAAAAGCAGTTTGATATCGCATTCTATGCACAATGGCCTAACGCCATCAACAGCGTCCGTAATTACACATAATTCATTAATTGATCGAAATTCTGGTTCGAAACATTTAATATCACCACCGTTAAAATCACACCAAATATTGAGCTCAGTACCGAGATCAGCCGCCTCGGCCATGCACAATAGTCATCATCAATCGTTATATAATACAACACCAACGTCATCCCATCATCCATCACATTTAAACAGCACGCCATCAATATTCTCGCCAAATGCAGCGAAATACGATCTAACACATAGTACGCCAACGCATCTACATACATCACATCCAAATGCAGCATCATATTTGCATGGAAATCAATTACCAACACCATCGTTTGGTCAAGTTAAATCCGAATCGTCGACCCCATCATCATACGATTATATGAATAATTGTTTGCAAAGTGGATATTTTGGAGGAGCATTTACTGCTTTGGGAACACCGACAAGTGCGCACAGTGCCACCGAATTAGCAGGCTATCACCATCAACATAATGTAATACAAGCAGCCAAACTAATGGCATCatcataa
- Protein Sequence
- MFHSTTAYSEMSPVTGSVPNVSYHQSQAGAPNTPVYVPSNRAIPHTQYPTGAHFTGAVAAAAQNGWTTDSFSTAHSQLPPQFYAQNAVMMSSWGAYDRGFQRTSPYDNGMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRATTLWRRNMEGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKSGSGGGSQNSDLMMGKKEELSDEIKSSLISHSMHNGLTPSTASVITHNSLIDRNSGSKHLISPPLKSHQILSSVPRSAASAMHNSHHQSLYNTTPTSSHHPSHLNSTPSIFSPNAAKYDLTHSTPTHLHTSHPNAASYLHGNQLPTPSFGQVKSESSTPSSYDYMNNCLQSGYFGGAFTALGTPTSAHSATELAGYHHQHNVIQAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01460807; iTF_01455340; iTF_01459150; iTF_01457014; iTF_01052855; iTF_01054903;
- 90% Identity
- iTF_01054903;
- 80% Identity
- -