Basic Information

Insect: Tipula lateralis
Gene Symbol: -
Assembly: GCA_963932295.1
Location: OZ010736.1:40018189-40024825[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.7 3.4e+02 3.1 0.3 2 23 8 29 7 29 0.94

2 14 0.022 2.9 9.6 1.6 1 23 1093 1115 1093 1116 0.96

3 14 0.028 3.6 9.3 1.4 1 23 1229 1251 1229 1251 0.97

4 14 1.1e-05 0.0014 20.0 3.2 2 23 1254 1275 1254 1275 0.97

5 14 0.0055 0.71 11.5 0.8 6 23 1285 1302 1283 1302 0.97

6 14 2.9e-05 0.0038 18.7 3.6 3 23 1310 1330 1309 1331 0.96

7 14 0.22 28 6.5 2.3 5 23 1344 1362 1341 1362 0.95

8 14 0.00015 0.019 16.5 2.6 3 23 1369 1390 1369 1390 0.98

9 14 5.5 7.2e+02 2.1 2.6 2 23 1403 1423 1402 1423 0.95

10 14 4e-05 0.0052 18.2 1.4 1 20 1429 1448 1429 1451 0.95

11 14 0.00013 0.017 16.7 0.6 1 23 1459 1481 1459 1481 0.99

12 14 2.7e-06 0.00035 21.9 2.4 1 23 1487 1509 1487 1509 0.98

13 14 0.0003 0.039 15.5 3.8 1 23 1515 1537 1515 1537 0.98

14 14 0.0048 0.62 11.7 3.3 1 23 1543 1565 1543 1566 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.7	3.4e+02	3.1	0.3	2	23	8	29	7	29	0.94
2	14	0.022	2.9	9.6	1.6	1	23	1093	1115	1093	1116	0.96
3	14	0.028	3.6	9.3	1.4	1	23	1229	1251	1229	1251	0.97
4	14	1.1e-05	0.0014	20.0	3.2	2	23	1254	1275	1254	1275	0.97
5	14	0.0055	0.71	11.5	0.8	6	23	1285	1302	1283	1302	0.97
6	14	2.9e-05	0.0038	18.7	3.6	3	23	1310	1330	1309	1331	0.96
7	14	0.22	28	6.5	2.3	5	23	1344	1362	1341	1362	0.95
8	14	0.00015	0.019	16.5	2.6	3	23	1369	1390	1369	1390	0.98
9	14	5.5	7.2e+02	2.1	2.6	2	23	1403	1423	1402	1423	0.95
10	14	4e-05	0.0052	18.2	1.4	1	20	1429	1448	1429	1451	0.95
11	14	0.00013	0.017	16.7	0.6	1	23	1459	1481	1459	1481	0.99
12	14	2.7e-06	0.00035	21.9	2.4	1	23	1487	1509	1487	1509	0.98
13	14	0.0003	0.039	15.5	3.8	1	23	1515	1537	1515	1537	0.98
14	14	0.0048	0.62	11.7	3.3	1	23	1543	1565	1543	1566	0.95

Sequence Information

Coding Sequence: ATGTAtgctcaacaacaacaacaatgtccTGTTTGTACGTTATTTCTTCATCCGGGCATGAACTTGGAAACTCATTTGGAGACACATCCAAAAGACCAAGTTATCAAAGCGCTTGTTTCAACAATGACACAACGTACTAGTGCTGTACTGATTGATAATAATACAGCGATTACAAGGGCACCACCACCACATCCAACGAATCATAATGGACACAATGCCATTTTGTATCATGATTCACAACTAAATTCGACGCCAAGTCTAATAGAATATAGGCCTCAACAAATAACACAACCACCTCCATCGCAACCTAATTTTTTAATAGTGAAGAGTACGAgcacaaatatttttcgaagaagcAATGCcgcaatattaataaataatcaaccCCCACCGCCTCAACTATCACAACACCATCTTGAAGACCATCATTATCCAAAATATGATAATCACAGTACGCCACAACAATCATTTGATACAGTCCTACCCAAAATTCATCatcataataaacaaaactttaatcAATCACATGATCATCAtcagaataataatatattagatAATTCCATTAATCATAgtaatagtagtagtaatagTGTTGATAACGTAAATAGAACGGGCGATGCAGCTCAATTAGAATTAGACAATTATGAAAATATACCTCAgaaatatgatgatgatgatgatgatgttgataatAATGATGTCGGTCTTAAAGATGAAATGGATGGAACTACATGTAGTAATAGTAATAACGATTACTATGATCAAGATAATAGTAATAACAGTCaccataatcataataataataatagacaaAATGAAGCCGGCAGTCCAAATAGATTGCATAATATATCTGGGTGCGATGAAGTAGGTAGCGAAATTCATAACGATACAAATAGTCAAATTGCGGCCAAATATTTTGAACAGGACAACGGTGATTTTGTCGTACAAGAAAGTCCAAAATCTTATGTTGAATATACAGAGAATGATGAAGGGGATTTTATGGTAACTGAAAAAGTAGTACGTACTCCGTTGAATATTCTACATTTCGTTGACGAGAATGAAGAAAATGAAGCGAATGATGAAATTCAAATGCATGACGATCAGGACGAAAATTACAATGAAAATGTCGAAGAAAATGTAATACCAGTTAACCACTCGTTCTCGAACAACATCAATAATTTAAAAGGTTTAAAAGTATTGAGTAATGTGAAATTAACACCAGACATGATTTCATCTGGGATAAAAGAGATTATTAGTAGTGCAAAATCGGTTAATTTGAATGACAGCCAAAATGctaaaatttcaccaaaaatcaAGGAAGACATTGAACTGTTATCTGATGATGAGTATCTAGTTGCTCCACCATCTTATAACTCCAATATAAACGCAAAGGAGTCATCACCACCTCCTTCACCTCAAGCAAGCTGTTCAAAAAGTGTTGATAATGATCCACCTTTAACGACATCTGTGATTCGCATGGCAACTACGACAGTGTTGCCAAATGAGCCCGTCTTTAAAGAACCCCCAAAAACTTCATTACTGATTCAATCAAAACCTTCGTATAAATTAAACATCCTCAAGAAACAACCGAAAATACTTGTAGTAAAACTAAAGAATCCACTACCAAAAGAGACTGATGATTccgagaaaaatgaaaaaatgaatattaaaatggagaatttagaTAGCTGGCAACAACCAACTTCGTCAAAAAGTCGGGAGGATATAAAAGTGGAAGTTGTCGAGCCTAAAGTTTTTGATGAGATAGCGGAAGAGCCTATTAAGAAAATGTCATTATTCGCAGATTCTATTAAACGTCCACAAAAGTTTTCTCGAATTAAAAAACGACGAGTCAATGGAAAAGCGAAAAAATTGAGacttctaaataaaataaccaaatcaaAAGAGGCACGAAATTCAAAAAGGATGAAACTCCAAAAATCGGAATTACAAAAACCGGGTCATTCGAGGAATTGTATAATGACAAAGGCGATCAAGCAAGTTAATCCAAATTCCCATACGAACTTAGAAGTATCTGACGAGCGTGTTAACTTGGAATTGAATTCaagtaatgaaaatcaattttatgctAACGACTTACCAAATGCTGAGGGTTATGTGGAACCTTCGATTGcagattttacaaataatttgtataGTGAATTGAAATTTGAAGAAACTCAAATAGAAGAGCCATCTATTGCAACAATGAATACTCCGGTTCCTGCCAGTACAAAAACTGCCTATAATGTGCATCCCGATATTAGTATCAAACTAGACAAGGATGAACTTTCTTTTGCAGCTGAAAAAAACGAAGTGAATGAAACGTTAactaaatcatcaatttttggAACCGCTAATAACGAGGATAACAAAGACGATATTCCTCATGTTACTAATTCTCCCGCAGAAACTGACATTAAACTATCAGTTTCATGGACATCAGAAATTACATCTGCTATTGAAACTATTGAATCTCATTCAAGTCAACATTTATTGCCAGAATATACTTGTCCTACACCTGAGCAGAAGatagaaaatcaaaatgatACAAAAAGTTTGATTGCTACCGATGCGATTAGTTGGAAACCAAATACACAAGAAAATCCAATAAATTATGACGATTTAAATAATACGGCTGGTCCTAGTTCTAGTTACCGTTTTCCGAATTTCTCTATGGGAAATTACGATCCAGAGTTTCTATTTCCTTCGGCATCGACAGACAGGAATAGTcgatttttagaatttatcgATGATAATCAAGAGGCTGCAACATGGAAACATCCATTTAGTCCTCagtatgtaaattttgaaaatgatcgAAATTCGTATATGGATCTGGATACGTGTAAAACTACAAATCTACCATATAATCGAGCAGCATCGACGGAAAGTATAAATATTCGAACTGATGAGAAAATGCCTGCTAAAGGCGAGATTTCCGAGCAGGAGAGTAATGGCGAGGTGGATGTTTCGTGGAATCATCAAATATATCAATACTGCCAACAGGAGTCTTTACCTAAATATTATAATCCGAATGAGCAATCGTCAGCTGGTTCAAAAGAATTATGGAAGCcgtttaatgaaaataatttccaacaatTTTCTCATAATATTCCTAAATTTAATCAAATCACTGAACCGATTCCAACGTATAGTAATCCAAACGGAACAACTCCCAACGATATTTATATAGTAGAAGAAAAACCAGATGTTGTAAATATTGTTGATTTGGATAATACCacaaagaaaaaggaaaaaaagcCACGGTGCTACCGTTGCACTGAATGCTATGCGGTATTTGAAAATCTACGATTAAAACGCGCTCATATTAAATTACACCATCCCGATTCTCTATTAACACCACATAAAGCGCCAACTGTACCAACGGCAACAAGTGTCATTAAAGAAGATAATAACGAAAtggattcaaaattatttttttcttcaatcACGGATACTGGTTTAAACATGTGTACAACGTTCGAATTTAATCGAAATGAGATAAGTGTAACTGCCGAACCTACAGTAAAAACTGAAGATGggactgaaaaaaaaattatgggaTTTGATGAGCTTAAAAACGAATTGTTGCAAACGGGTGCACAAACGGCTGTGTCGAAATCAATAGGAACAGTGCCAAGAATAGTCAAAATTTTAAaggcgaaaaataaaaaaatttacgtgTGCCAAAAATGTAACGAGGAATTTAAAAGTATTCGGTGTTTTGACGCACATTTGGAAATACATCCGGCTGAGTGTCAACAATGTGGCAAAACGTTTCGGCATTGGAATAATTTATCACTGCATCTTAAACGGCATCTAGGTATAAAAAATTACGCCTGCCGCTGTGGTAAAAAATTcgtattgaaacaaaatttagatGAGCATATGAGGATACATACTGGAAGTGCACCAATTTTATGTAACGACTGCCCACGGAAATTTCGACGCTATTCGAATTTAATTCAGCATCGTAATCGTCATCACTTGAATATGCGACCGGAACAAAAAGATTATGTGTGTCACTGTGGTGAGGTATTTCACACAAAAGCAAAATTTAATTGGCATAAAGAAATTCATGATAAAAAGCCTAAAGGATGTCCGTATTGTCGCGAACgctttattcataaaaatagtttaacgCGACATATTCGATTGTCGCATGCggaaaaatattggttttttaaaaatcaagcCGTCGAATGTCCCATTTGTCATCAGTTATATTTGAAAACCAGCATAAAGCATCATATCAATAAGCATAATGTTAAGACTGAATTTAAgtgtaatatatgtaataaattgtttagtaCAAAATGGAACCTAAAACAACATCGTTGGATACATGCATGTCGCTCAACCAAACCATACAAATGCAAAATGTGTACCTCCGCATTTGTCCGTGAATCCGATTACATCACACACATGAATATACATAAATCGATTAAACCGTTTACTTGTGACTATTGCGGACGCCAATTTAGCCGAAAATATAATTGGTTACGTCATACACGTGAACATGAATtaccgaaaaaatttaaatgtaatatttgtaGTAAACAGTTTCACAGGGCATATTACTTAACTGAACACTCACGTGTTCATACCGGAGAGCGACCATATTCATGTAATATATGTGGTAAAACATCAGTAACAAAAACtaatcataataaacatattgttaTACATCATGCACGAGATCCTCTAGCGGCTGAAGGATAA
Protein Sequence: MYAQQQQQCPVCTLFLHPGMNLETHLETHPKDQVIKALVSTMTQRTSAVLIDNNTAITRAPPPHPTNHNGHNAILYHDSQLNSTPSLIEYRPQQITQPPPSQPNFLIVKSTSTNIFRRSNAAILINNQPPPPQLSQHHLEDHHYPKYDNHSTPQQSFDTVLPKIHHHNKQNFNQSHDHHQNNNILDNSINHSNSSSNSVDNVNRTGDAAQLELDNYENIPQKYDDDDDDVDNNDVGLKDEMDGTTCSNSNNDYYDQDNSNNSHHNHNNNNRQNEAGSPNRLHNISGCDEVGSEIHNDTNSQIAAKYFEQDNGDFVVQESPKSYVEYTENDEGDFMVTEKVVRTPLNILHFVDENEENEANDEIQMHDDQDENYNENVEENVIPVNHSFSNNINNLKGLKVLSNVKLTPDMISSGIKEIISSAKSVNLNDSQNAKISPKIKEDIELLSDDEYLVAPPSYNSNINAKESSPPPSPQASCSKSVDNDPPLTTSVIRMATTTVLPNEPVFKEPPKTSLLIQSKPSYKLNILKKQPKILVVKLKNPLPKETDDSEKNEKMNIKMENLDSWQQPTSSKSREDIKVEVVEPKVFDEIAEEPIKKMSLFADSIKRPQKFSRIKKRRVNGKAKKLRLLNKITKSKEARNSKRMKLQKSELQKPGHSRNCIMTKAIKQVNPNSHTNLEVSDERVNLELNSSNENQFYANDLPNAEGYVEPSIADFTNNLYSELKFEETQIEEPSIATMNTPVPASTKTAYNVHPDISIKLDKDELSFAAEKNEVNETLTKSSIFGTANNEDNKDDIPHVTNSPAETDIKLSVSWTSEITSAIETIESHSSQHLLPEYTCPTPEQKIENQNDTKSLIATDAISWKPNTQENPINYDDLNNTAGPSSSYRFPNFSMGNYDPEFLFPSASTDRNSRFLEFIDDNQEAATWKHPFSPQYVNFENDRNSYMDLDTCKTTNLPYNRAASTESINIRTDEKMPAKGEISEQESNGEVDVSWNHQIYQYCQQESLPKYYNPNEQSSAGSKELWKPFNENNFQQFSHNIPKFNQITEPIPTYSNPNGTTPNDIYIVEEKPDVVNIVDLDNTTKKKEKKPRCYRCTECYAVFENLRLKRAHIKLHHPDSLLTPHKAPTVPTATSVIKEDNNEMDSKLFFSSITDTGLNMCTTFEFNRNEISVTAEPTVKTEDGTEKKIMGFDELKNELLQTGAQTAVSKSIGTVPRIVKILKAKNKKIYVCQKCNEEFKSIRCFDAHLEIHPAECQQCGKTFRHWNNLSLHLKRHLGIKNYACRCGKKFVLKQNLDEHMRIHTGSAPILCNDCPRKFRRYSNLIQHRNRHHLNMRPEQKDYVCHCGEVFHTKAKFNWHKEIHDKKPKGCPYCRERFIHKNSLTRHIRLSHAEKYWFFKNQAVECPICHQLYLKTSIKHHINKHNVKTEFKCNICNKLFSTKWNLKQHRWIHACRSTKPYKCKMCTSAFVRESDYITHMNIHKSIKPFTCDYCGRQFSRKYNWLRHTREHELPKKFKCNICSKQFHRAYYLTEHSRVHTGERPYSCNICGKTSVTKTNHNKHIVIHHARDPLAAEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -