Basic Information

Insect: Tipula lateralis
Gene Symbol: -
Assembly: GCA_963932295.1
Location: OZ010737.1:9304908-9315227[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 8.3e-05 0.011 17.3 4.1 2 23 447 468 446 468 0.96

2 21 0.011 1.4 10.6 4.1 3 23 525 545 525 545 0.98

3 21 0.0077 1 11.1 6.5 1 23 697 719 697 719 0.98

4 21 0.22 29 6.5 9.3 1 23 769 791 769 791 0.96

5 21 0.0068 0.87 11.2 0.1 2 23 800 821 800 821 0.97

6 21 0.85 1.1e+02 4.6 0.1 1 14 843 856 843 857 0.88

7 21 0.0028 0.36 12.5 3.1 2 23 921 942 920 942 0.96

8 21 0.0074 0.96 11.1 0.3 1 23 969 991 969 991 0.95

9 21 3.9e-05 0.0051 18.3 3.9 1 23 997 1019 997 1019 0.99

10 21 0.001 0.13 13.8 0.5 2 23 1028 1049 1027 1049 0.97

11 21 2.3e-06 0.0003 22.2 1.2 3 23 1057 1077 1055 1077 0.97

12 21 0.00018 0.023 16.2 1.1 1 23 1083 1105 1083 1105 0.99

13 21 0.057 7.3 8.3 2.4 1 23 1111 1133 1111 1133 0.98

14 21 0.00042 0.055 15.0 1.4 1 23 1139 1161 1139 1161 0.97

15 21 5.9e-05 0.0077 17.7 0.7 1 23 1299 1321 1299 1321 0.99

16 21 0.00081 0.11 14.1 0.8 1 23 1327 1349 1327 1349 0.97

17 21 0.00089 0.12 14.0 0.8 2 23 1356 1377 1355 1377 0.97

18 21 6e-06 0.00077 20.9 1.4 2 23 1384 1405 1383 1405 0.97

19 21 2.4e-07 3.1e-05 25.2 1.0 1 23 1411 1433 1411 1433 0.99

20 21 0.0071 0.92 11.2 4.4 1 23 1439 1461 1439 1461 0.99

21 21 0.0042 0.54 11.9 4.3 1 23 1467 1490 1467 1490 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	8.3e-05	0.011	17.3	4.1	2	23	447	468	446	468	0.96
2	21	0.011	1.4	10.6	4.1	3	23	525	545	525	545	0.98
3	21	0.0077	1	11.1	6.5	1	23	697	719	697	719	0.98
4	21	0.22	29	6.5	9.3	1	23	769	791	769	791	0.96
5	21	0.0068	0.87	11.2	0.1	2	23	800	821	800	821	0.97
6	21	0.85	1.1e+02	4.6	0.1	1	14	843	856	843	857	0.88
7	21	0.0028	0.36	12.5	3.1	2	23	921	942	920	942	0.96
8	21	0.0074	0.96	11.1	0.3	1	23	969	991	969	991	0.95
9	21	3.9e-05	0.0051	18.3	3.9	1	23	997	1019	997	1019	0.99
10	21	0.001	0.13	13.8	0.5	2	23	1028	1049	1027	1049	0.97
11	21	2.3e-06	0.0003	22.2	1.2	3	23	1057	1077	1055	1077	0.97
12	21	0.00018	0.023	16.2	1.1	1	23	1083	1105	1083	1105	0.99
13	21	0.057	7.3	8.3	2.4	1	23	1111	1133	1111	1133	0.98
14	21	0.00042	0.055	15.0	1.4	1	23	1139	1161	1139	1161	0.97
15	21	5.9e-05	0.0077	17.7	0.7	1	23	1299	1321	1299	1321	0.99
16	21	0.00081	0.11	14.1	0.8	1	23	1327	1349	1327	1349	0.97
17	21	0.00089	0.12	14.0	0.8	2	23	1356	1377	1355	1377	0.97
18	21	6e-06	0.00077	20.9	1.4	2	23	1384	1405	1383	1405	0.97
19	21	2.4e-07	3.1e-05	25.2	1.0	1	23	1411	1433	1411	1433	0.99
20	21	0.0071	0.92	11.2	4.4	1	23	1439	1461	1439	1461	0.99
21	21	0.0042	0.54	11.9	4.3	1	23	1467	1490	1467	1490	0.96

Sequence Information

Coding Sequence: ATGGCAATATTTacgttaaaacaaaaaatatttattgttaaacgtTACTATCAAAGTGGAAATTCTAAACAAgcagtaaaaattgaatatccTGAAGAATTTCATGATGAGTTTAATACGCCTACAGATGAGAATATAACAgatttgattaatttgtttGAAGAGTTTGGTAGCGTTTTAACAtttagtaaaacaaaaattaacaatattttggaaGATGCTGAAGAATATATGGAATATTGTTATGAAAACATTCATGAATCTGATCCTTTGTCAAATGATGAAAAAGAATTCAAACCCAAcattaatgatttaaatatgGGCATCGATACTGTCGGTAGtgtagaagaaataaaaaataacaaaattctatgTAAATTGGTGACAAACGGTTTATCACATGATAATTCGGTTTCTTATTTGGAAGCCGAAATTAAGCCAGAATTGGAtgagaatttaatatttagtaatGGACAACTGGCGTCACACGTGGAACAAGACAAAAATAACGAATTTATGtgtaaattggaaataaatattttatcaaatgatGATTTTGATGACAATTTAGGCTTTATTAATGAATCGGATACCGCTAATAGTGCAGAAGAAgcgttaaataataataatccacgtaaattgaaaataaatattgtaccAAATGATGATGGGAAATCGTATACTCCTTCCCCATTAGAAGCTAAAGACAACGTAGATTTGTTTAAAGATAAAGGAATTAGTAATGAAGGACCATCAGACATATTTGGTTGtgcagaaaaaaacttaaaatgggATATTCCATGCAAGTTAAATACATTATTAAATGATATGTTATCCGATTCTGAAACCATAATCGATGgtgattttgatgaaaatttaactGTTGATAATGTTTCAGATACAggtGAAATCGAAGAAGCCGTATATAATAACACTATCGAAATTAAACAAGAAGTTGATCCTCTATCTAATGATACGGAATTCCAAGAAGAAATCAAGATTAATGAGAGTTTGGATGAAAATTTAGAAGTTAATacattaccaaaaataatttacaaagagAAGGAAACtgcaaatcataataatattccaTATGTACCGAAAATAAATAAGGAAGAAATTGTGAATTATAACGATAATTTAAGTAGACAGGAAATTAATGTGGAAAAAACTGTAAATAACGATATTCCATGTGAACAGGAAATAAATGATACATCAAATGAAAATGCAGAATCTGATACAGAAACGATAAACAATACAgattttgaagtaaatttaaatagttttgatgTCACAAAGACTGTGGATAAAGATAAAGAGACGGCTACCAAAACTATTTCATGTGCACATTGCGAAAAAACTTTTAGTACAAAACACGgatatacaaaacatattaaagttcactacaaatattgtaaaatttgcaagaaaaaatgttctttgactATTGACCAAACAACATCACATAGAGAAGCAAGCTTGGAACCCGACAGTGAAGATAATTGTAAACTAACCAAAGAGGATAATTTAGAAGATGCTACTGCTTTAGATCCTGGTGACAAGAGTCATTGGTGTTGTTTGTGTAAGAAGTCATACAAAACAAGAATACGTTTGCAGGCCCACGTACGTACTCATTTAACAGATAAAGAGCGTCCACAAAAATGTGAAggtGAAGCCGAAGAAGCTACAtataacatttttgaaattaaacaagaaTTTGATCCTCTTTCTTATGATACGGACTTTCAACTAGAAACTAAACACAATGTAGGCTTGGACGAAAATTTAGATGTTAATGCATTACTAAAAACAATTTACAATGAGGAACAAACTACAAATGGCATTATTCCATGTAAACAGGAAATAAATGTAACGGAAACTAAGCAAAAGGATATGCCATGTATACAGAGAAATGTGAATGAATCTGTGAATAACAATATTCCATGTGAAGAGGAACTAAATTCTTTTTCAAATGATAGTGCGGAATCTGATACAGAATCGATAAACCATAAAGATTTTGATGTAAATTTAGATAGTGTTGCTAGTATAACGACTCTTGAACATGAAAAGGAGATGGTAGCAAACAATTTTCCATGTAGACATTGCAATAGAACCTTTACAACAAAACAATCATGTTCAATTCATATGAGGATCCACTACAAGAAATGTACACTTTGCAATAAAAACTGTTCTTTGTCTGTTGAAAGAGAAGAAAGCTTGGATCCTGACAATAAAGATAATTCTCAAGTTAACAAAGGAGATAATTTAGAAGACGCCAGTGTTATACATCCTGATGACAATaaacattgttgttgtttgtgcaAGAAGTCATATAAAACAAGAATACGTTTACAGGAACACGTACGAACTCATTTAACAGATAAAGAGCGTCCACGAAAATGTGAAATATGTGGAAAAGGTTTTCTTAAGAAATATCCACTACAAGTACATTTAGCTTCACATTTCAGAAAAAAGTCATCCGATTTACAACTAACTACAGAACCAGTAATCAAACCACTTAGCAGTTTCATTTGCGATATTTGTGGCCAGTCACTTACCTCAAAAggTGATCCCGTAGAACCATCGTATAACAGTTTTGAAATCAAATCAGAAATTAATTCCTTATTAAATGGTGTACTCGTTGAACAACCGTTGGAAACCATCTTTGGAACCAAAGCATCTTTGGAAACAGAAATCGATGAAGATTATCTTGATAGTGATAAATCAGAGACTGATAGTGCAGATAAAACAAACGACATATCATGTGAACAATGCGACAGgaaatttaaaacgaaaaggGTTTATTCTCACCACATGAGTGTGCATGAAAAGGAATGCAAATTATGCAAAAAGAAATGCCGTGATATAATTAAACATATGGCGTTACATAGTGGAGATCGTCTATATCAATGCAGTGAATGTGGTTCTCAGTTTAAAAGTATGGATAGGCTGAAAGAGCATGCTGTTGTACATTCCGATGAAAAACCATATTCATGTAATACGTGCCAAAAATCTTTTAAGACACGAAAACGTTTAAAGGAACATGCACGAACTCATTTAACAAATGCTGAACGTCCCATTAAATGTGAAATTTGTGGCAAaggatttttaacaaaactcttactaaaaatacattttagaaCCCACACCGGTGAAAAACAAtcaatttgtaatatttgtggcCAGTCATATGCTTCGAATCATACGTTAAAAATTCATATGAGAACCCATACGGGAGAAAAACCATATCAATGTCCATTttgcaacaacaaatataatacaTCCGGCAGTTTAAATATTCACAAACGTATTCATACTGGTGAAAAGCCTTACACTTGCAAAACTTGTGAAaagggattttatgatttagctACGTGCCGGGCACACGAACAAACGCATTCAACTGAGTATCTTTTTAATTGTAAAGTTTGCAACAAAGCTTTGAAAACACGTAAAAGTTTACGAGAGCATGAAAAAATTCATAGGCCGAAAACTGAGCTGCCTGTAAAATGTGATgacTCACATACAGTTATAGTTAAAAACCCACTCGAAAtagatgaaaattataatagcgAAGATCCTATAAAAAAAGAACATTATTCAGATTGCGATGATGATGAAGTCGATAATGATAATGACAACGACTATGAATCGGATAATAAGGATGAGGTCACTGATATAATAGCAGCAAGTATTAAATATGATGATTGGATGAATACAAGAAATAATGACGATGAGATTGCTATTGATGTGGTAAAAGTTGAAATGCCTGATTTAAATAATACAGAAACAAAAAGTACGTCTTCCGAAGAAGTGGAGCCTGATATAGACGATGTGCAGCCAtctaaaaaagtaataaaaaaggaaaaacgtATTTCTAATGGTGATCGAACGTATCAATGTACAGAATGTGGaacacaatttataaatatggtACGTTTGAAAAAACATATGGTTACGCATTCCGATGAACGGCCATTCGCGTGTGACATATGCCAGAAACCATTTAAAACACGCGATCGAGTAagagaacacaaaaaaattcatttagccGATCGTCCTGTAAAATGTGAAATATGTGGTAAAGGTTTTTTGCACAACGGCCGTTTACGAAAACATATGGTTATGCACACAGGTGAAAAACCATCTGTGTGCAGTGTGTGTGGCAAATGTTTTGCATCAAATGAATCGTTAAGGGTACACAATAGGACGCATACTGGCGAAAAACCATATAAATGCAGTTACTGcggaaaacaatttattacctCGGGTAGTTTAAAAAATCATGTTCGTATTCATACGGGTGAGAAACCATACAAATGCCAGTATTGTGATAAACGGTTTTACGAGTCTGCTTCATGTCGAGTACACGAACGTACGCATACAGGTAATTATCcgtatatttgtaaattatgtGGAAAGGCTCATAATCATCCAAGTAATTTAAAATCTCATTTAAAACATGCCCATCGTGAGGATCAAAGCTAA
Protein Sequence: MAIFTLKQKIFIVKRYYQSGNSKQAVKIEYPEEFHDEFNTPTDENITDLINLFEEFGSVLTFSKTKINNILEDAEEYMEYCYENIHESDPLSNDEKEFKPNINDLNMGIDTVGSVEEIKNNKILCKLVTNGLSHDNSVSYLEAEIKPELDENLIFSNGQLASHVEQDKNNEFMCKLEINILSNDDFDDNLGFINESDTANSAEEALNNNNPRKLKINIVPNDDGKSYTPSPLEAKDNVDLFKDKGISNEGPSDIFGCAEKNLKWDIPCKLNTLLNDMLSDSETIIDGDFDENLTVDNVSDTGEIEEAVYNNTIEIKQEVDPLSNDTEFQEEIKINESLDENLEVNTLPKIIYKEKETANHNNIPYVPKINKEEIVNYNDNLSRQEINVEKTVNNDIPCEQEINDTSNENAESDTETINNTDFEVNLNSFDVTKTVDKDKETATKTISCAHCEKTFSTKHGYTKHIKVHYKYCKICKKKCSLTIDQTTSHREASLEPDSEDNCKLTKEDNLEDATALDPGDKSHWCCLCKKSYKTRIRLQAHVRTHLTDKERPQKCEGEAEEATYNIFEIKQEFDPLSYDTDFQLETKHNVGLDENLDVNALLKTIYNEEQTTNGIIPCKQEINVTETKQKDMPCIQRNVNESVNNNIPCEEELNSFSNDSAESDTESINHKDFDVNLDSVASITTLEHEKEMVANNFPCRHCNRTFTTKQSCSIHMRIHYKKCTLCNKNCSLSVEREESLDPDNKDNSQVNKGDNLEDASVIHPDDNKHCCCLCKKSYKTRIRLQEHVRTHLTDKERPRKCEICGKGFLKKYPLQVHLASHFRKKSSDLQLTTEPVIKPLSSFICDICGQSLTSKGDPVEPSYNSFEIKSEINSLLNGVLVEQPLETIFGTKASLETEIDEDYLDSDKSETDSADKTNDISCEQCDRKFKTKRVYSHHMSVHEKECKLCKKKCRDIIKHMALHSGDRLYQCSECGSQFKSMDRLKEHAVVHSDEKPYSCNTCQKSFKTRKRLKEHARTHLTNAERPIKCEICGKGFLTKLLLKIHFRTHTGEKQSICNICGQSYASNHTLKIHMRTHTGEKPYQCPFCNNKYNTSGSLNIHKRIHTGEKPYTCKTCEKGFYDLATCRAHEQTHSTEYLFNCKVCNKALKTRKSLREHEKIHRPKTELPVKCDDSHTVIVKNPLEIDENYNSEDPIKKEHYSDCDDDEVDNDNDNDYESDNKDEVTDIIAASIKYDDWMNTRNNDDEIAIDVVKVEMPDLNNTETKSTSSEEVEPDIDDVQPSKKVIKKEKRISNGDRTYQCTECGTQFINMVRLKKHMVTHSDERPFACDICQKPFKTRDRVREHKKIHLADRPVKCEICGKGFLHNGRLRKHMVMHTGEKPSVCSVCGKCFASNESLRVHNRTHTGEKPYKCSYCGKQFITSGSLKNHVRIHTGEKPYKCQYCDKRFYESASCRVHERTHTGNYPYICKLCGKAHNHPSNLKSHLKHAHREDQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -