Tlat010263.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tipula lateralis
Gene Symbol
ZFY
Assembly
GCA_963932295.1
Location
OZ010736.1:150308641-150311037[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.00011 0.014 16.9 4.9 1 23 51 73 51 73 0.99
2 20 0.00031 0.041 15.4 2.5 1 23 79 102 79 102 0.96
3 20 0.019 2.4 9.9 2.9 2 23 114 135 114 135 0.96
4 20 5 6.5e+02 2.2 0.8 1 10 141 150 141 150 0.91
5 20 1.3e-07 1.6e-05 26.1 0.9 3 23 189 209 187 209 0.97
6 20 2.6e-05 0.0034 18.8 1.1 1 23 215 237 215 237 0.98
7 20 0.00022 0.028 15.9 2.0 1 23 243 266 243 266 0.95
8 20 0.00053 0.069 14.7 1.3 1 23 278 301 278 301 0.94
9 20 7.4e-07 9.5e-05 23.7 0.3 3 23 379 399 377 399 0.92
10 20 0.00052 0.067 14.7 3.1 1 23 405 427 405 427 0.98
11 20 0.28 36 6.2 0.6 1 22 434 455 434 457 0.88
12 20 0.17 22 6.9 0.4 2 23 465 486 464 486 0.90
13 20 1.7 2.2e+02 3.7 12.3 1 23 524 546 524 546 0.98
14 20 0.00055 0.071 14.7 3.3 1 23 552 574 552 574 0.98
15 20 0.001 0.13 13.8 0.2 1 23 580 602 580 602 0.97
16 20 2.6e-05 0.0033 18.9 6.5 1 23 608 630 608 630 0.98
17 20 7.1e-05 0.0092 17.5 0.7 3 23 660 680 659 680 0.98
18 20 5.1e-07 6.6e-05 24.2 2.4 1 23 686 708 686 708 0.99
19 20 0.0001 0.013 16.9 3.9 1 23 716 738 716 738 0.99
20 20 0.0016 0.21 13.2 2.2 1 23 744 766 744 766 0.98

Sequence Information

Coding Sequence
ATGTTTCTTAACGAAGAGGAGATTCCAATCGACGGGGCCAATAATGAATTTTTCTTAGAATATCACCACTCAGAAATCGATCAATCTGAAGAAACAATCGATCAgtctattgttcaaaattttgatccTGAAATCTCCATTCAATATAACTATAAATGTGAACATTGTGGAGCCAAATTTGTACACTTGAAAGTGTTGAATCGACATAAGCGAACACATGTATACAAAAAACCCTTTAAATGCGACCAATGCCAtgaaagttttaatttcttAGTCAACTTAAAAGTGCATACTTCTATTTACCATGATACAATAAGTAACGAAgaaagtacaaaaaatgtatgctGTGTTTGCAATCGATTATTTCGCAGATTTTCAACTTTGCGAGGTCATCTCAAAGGGCATGCGGTttcggaatattttaattgtgaacACTGCGATGAAATATTCCTAGCGAAATTGTTCTATGACACCCATTGTGAAAAATACCACAAAAAAGAAGATAAGGCGAGTAAAATAACTAAAGTATCTAGAAACGGTAATGGAgctataataaatcaaaactgtAAATTATGTGggaaaatgtttaaaaagcCCAGCATGTTGATTCGCCATATGCGAGTGCATAATGGCGAAAAACCTTTTAAATGTGAAGTATGTGCTAAACAGTTTTCCCAAAAAAATACACTAAACATTCATTTACTTCGGCACACGGGAGATAAGCCGCACGTATGCTCCTTGTGCCAAATGAGATTCACGCAGCGAGGTAATCTGAAAATACACAAAGAAAAGGTACATAATAAGTACAATTTAAATGAGGACGAAACGAAATATCCATGTAATAAATGTTCGTGTGTGTTTCGTAAAATCGGTTCTCTTAATCGACATATAACCGAAGTGCACTGTACAAAGAATCAAACTGAAAAATTCATTGATCGCCCGGATTCATCCAATGACAACATAAATTTTACCGACATATTCTCACAAATCAACGGACTTAATCAAATTCCAACCATTGAAGCAGCAGAAAATCAAAGCACCAATATTATCCAGTTAGCCGATCGTCTTGAAAACGGAGTTTTAATACATCATAAGGTGCAACAAAACATCGATCGGGGTAAAAAAAGGCTTAGTTGTATTAATTGTGGAAAAACATTTACTCGGCCATCGGATCTATTGCGTCACATTCGTGTTCACACAAAAGAAAAACCTTTCGAATGCTATCTATGCAAACGACGATTTTCGGTTAAACGTACTCTATCGGTACACTATAAAACTCATGAAAGTACATTGCGGAAATTTGCATGTAGCATATGTtgtaaaaattttcgaaatgttgcCACATTGATCGATCATGGAAGTGAACTTCATCAAAATTGTGATAACTATTTGCAGTGCTTTCCATGTAAAGAGAATTTTTCAAACGTTGAACAACTAGAGGCTCATTCGAAGTTTCACAATCGGCGTCTTTTGGCAACAAAACGTAAATGTTATGACACAAGTATTCAGATGCAAGATCCAATTATTCTCAATCAAGAAACCAAAGTCGAAGACACACGACGTCGATTATATAAATGTGATAAATGCTGTAAGAGCTTCATCAAGTTATGTCACCTAAAGCAACACCACCTTTCTCATACAGTCGACCGGCcgtttaaatgtgataaatgtataaaatcgtTTAAATCTCGAAACTCCTTAACAATTCACAATCGTAGACATTTAAACATGAAACCTTACAATTGTGATATATGCAATGAGAGTTTCGTATCAAAACCGATTCTTAATCGGCATAAACTTATTCATTCAGAAGTACGTAATTTTATATGCCCGTATTgtcaaaaatcatttaaatctaACTCCCACTGTCGGAAGCATATTCGAATACATCAAAAGGAAGTTATGTCACCTTTGGTTGCTACTACCGATATTTGTCCTGATGAAACTGCTAAAGTGATACAACCAAATGCCCGGGCTTGCCAATACTGTAATCGATATTTTAAGAAACCAATTGATTTACGGCGGCACGAACGGATACATACCGGTGAACGAccatttaaatgtaataaatgtgaaaaatcattttctctACAGTCAACACTAAAAATTCATCAGCGGATCCACGAGAAGAATgattattatatgtacacatgcCACGTATGTTCTAATAAATACACAACAAAAAGCAGTCTTAATGTGCACAAACGAATTCACACAGGTGAAAAGCCTTTTAAATGCAAATATTGTGAAGCAGTATTCCGAACTAATGGGCATCGCAGTGTACACGAAATGAGCCATATAAAAACCGCCAACGAACGAGGAATCGATCCAAAAGAAGTTAAAATTATTCGACAATCTAAATTCGATAgcattgttgaaaatttaagatttaCCTAA
Protein Sequence
MFLNEEEIPIDGANNEFFLEYHHSEIDQSEETIDQSIVQNFDPEISIQYNYKCEHCGAKFVHLKVLNRHKRTHVYKKPFKCDQCHESFNFLVNLKVHTSIYHDTISNEESTKNVCCVCNRLFRRFSTLRGHLKGHAVSEYFNCEHCDEIFLAKLFYDTHCEKYHKKEDKASKITKVSRNGNGAIINQNCKLCGKMFKKPSMLIRHMRVHNGEKPFKCEVCAKQFSQKNTLNIHLLRHTGDKPHVCSLCQMRFTQRGNLKIHKEKVHNKYNLNEDETKYPCNKCSCVFRKIGSLNRHITEVHCTKNQTEKFIDRPDSSNDNINFTDIFSQINGLNQIPTIEAAENQSTNIIQLADRLENGVLIHHKVQQNIDRGKKRLSCINCGKTFTRPSDLLRHIRVHTKEKPFECYLCKRRFSVKRTLSVHYKTHESTLRKFACSICCKNFRNVATLIDHGSELHQNCDNYLQCFPCKENFSNVEQLEAHSKFHNRRLLATKRKCYDTSIQMQDPIILNQETKVEDTRRRLYKCDKCCKSFIKLCHLKQHHLSHTVDRPFKCDKCIKSFKSRNSLTIHNRRHLNMKPYNCDICNESFVSKPILNRHKLIHSEVRNFICPYCQKSFKSNSHCRKHIRIHQKEVMSPLVATTDICPDETAKVIQPNARACQYCNRYFKKPIDLRRHERIHTGERPFKCNKCEKSFSLQSTLKIHQRIHEKNDYYMYTCHVCSNKYTTKSSLNVHKRIHTGEKPFKCKYCEAVFRTNGHRSVHEMSHIKTANERGIDPKEVKIIRQSKFDSIVENLRFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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