Tlat008034.1
Basic Information
- Insect
- Tipula lateralis
- Gene Symbol
- crm
- Assembly
- GCA_963932295.1
- Location
- OZ010736.1:105936551-105942003[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7 1.5e+04 -2.7 0.0 33 40 125 132 117 132 0.81 2 2 7.6e-08 0.00016 22.8 0.0 1 44 134 189 134 191 0.84
Sequence Information
- Coding Sequence
- ATGGATCAAGAAGTTTTAAACAATCCAACAAGATTTAATGACGATTCGCTCAGCGATGGTTATATAATTAATGAACAAAGAATATCAACTGTAAATCCAATACTAAGTGTTAATAAAATATGCGAAATAGAAGCAAAGAAATTAATATCAGTATCCAATTCTACCTCAAAATCTTCATCGTTATCTTTAAAAGAGTCAAATGAATTATTAGGATCTGTAACTACATTTACCCCAACATGTGGTCCAGATTCAGGCCATACAGTTCGCACTAGCGCTCGGGTTATACAAAAAATGAGACTTGACTCTATTCGCCCGCCAACACCTCCAATAGTCGaaaaaaaagatcaaatcaaaGAAGAAAAACCGGGTCCAAAAAcaccaaatcaaataaaatctaatCGTAATGCTTGGACACATACCGATACAATATTCTTTTTTGAAGCATTGAACGAGTATGGTAAAGATTTTGAATCAATCGCTCATTATGTAAATACAAAATCGAAGCGAAAAAACTCATCAAATGTTACTTTTAAAACTCGGGATCAGATacgaattttttattatcaatcaTTGCAAAAAgtatcgaaatatttaaaattttctgaaGatgttAAAAAATTGGCCCAAGAATTATATGCTTTAATCAATTACGgagaaatgagaaaaaaattgatatttgtcAATGAAAAATCATTGATGAAATTAAGAGATTTAGTTTACAAAGGTTGGGTAACAATTCGCAGTAAAggtcgtaatataaaaattaaaacaccaTCGTGCAAAGCGTTACGACAATTAAATCAATTAGAAGAGTGGCAAGAAGAGATAAAATTACCGCCTCGAATCGAAGTACTTATGAAACCGTTCAATGTTGAAACTTGGGGAAAAGTTCATAATATTGCCCAAAATCCTAGAGTCAAAATGACGTTACCAATTCAACGACGAGTTTCtagtattttaaaaactttacaattgaaatggaaaattcagGATTTCCGATTGtgTGATAAAAGTATGACATTGCAACCTAACTCTGCAACGTCAATAGCGTTCGTTGAAAATGCACCAATAATTCGTATTTTACCCCCTCCAAATGCTGTTATCCATCGACCAATGGTAAATATTACAGAATTTTTAAGTAGTCATCGTATATGTTTGAACTCTTATGAAGAGCGAATTGGTGTTAAAGTGAAAGGTGAAACATTATGTTCCGAACGAATAAACTCACTAAAAGAAATGATGAAGACGAATTCAAAACGTCAAAGGAATGATAGCAATAGTGACAAAAAGAGTCccgaatttaaaaaattaaaacttgatTATGACATCAAACCGTTGGAGCCGTgcgaaaaattagaaatatatttgaatacatCTCATATGTTTAATCCATCGTCCGATTGCAACGACCTTGTCAAATCATCCGGCGACGAAGGTGATCAATGCAACGATgaagatattaaaaatgaaaaatatttatcggaCAACGAAGATATCAAATCCGAATCGTACATGAGTTCACAGAAAATGGGCGAAAATTGCGATAGCGAGAATGATAACGAGATGCGTAATGAGGATAAGCATAATATGTCGCCGAAAGACTTTAAATTTGAAGATTCGCTTGTTAGTACAaagaaaaagattaaaaaatcgaagaaaaatatacgaaaaaattcaaattatataaaaccgtTGATTAGTGAGGAGACTTTAAAATTAGTTCGAGAGGGGTGGACATTATCTAATATTGGTGATATTACGATTGGCGATTTGTATGTTAtgtttggaaatgatttaaaattaaatttagaatatgcgataacaacaaataatatgaGCGTCGATAGATCTGCTGAGTTAACGCGAGATGTATCTGCAAATATTTCGATTTGCGGACCATCGTTGAATGGTGGTGATATTCAAATAGAAACGATTACAATTAAAACCCAAAATGATAAATGcgaaaatgataaaattgaaaatttactgGGCACTAAATTAAGACAACTAATGTTAATAGCTAGTTTAATGGaacagaaaaagaaaaaaacatcGGGATGTATTTGTGGTCATAATTGCGAAAGGAATGTTCGACTTAAGAAAACTGATGATTTTACTGGAAGCTATATTGCAAATAAAACACACATGTCAAACCAGAATGATAATTATGTTTTCCGTCCACCTACGATACCGATACGGAGTAGTTTACCTGTAACAGAGCCATATAAACACCTATCAacgaattCAAATAACCAACATCTACAGCCAAAACTGGCAAAACTAAAAAATCGACAGACATCCTCTTCGAAGCAAGTGGTCGTTAAACGAATTTTGCAATTGCATCCGAATAACGAATCTCCCGCGTTAGGCGAAAATAAAACATCTACAAGTTCGTTAacacaacaaacacaaaataatgataattttgaGATTAAAGTTGATACATCGTCGTCACCATTAAATGCGGTTATTGATATAGCAATAAATACTATAAGAAATAAGAATAGTTCATCAAGTGATCAAAATACTATTACTAGTTATACGAGCAGCACATCTGATTTGATAgatacaaatttcgatatgcctgatttagaaaataatcaaacaacGGACATCAAATGTTTATTGGATGTGCAAGATGCATCGactataaatatgattattgatGAGAAAACCAAGTCTGAACAAAgttaCATTAATTTATCGTTGGCAGCTAGCAGTAAAGAAACTTCATTAAGCCATTTGAACGAGGACACCTCGATAAATACCGAATGGCTTTCATCTGATATAAATGATTTTTCGTTTAGCAGTTTTCTTGGTCATTTAGATAATTTGGCGGAAAATTCTCGTAAAGAACGAAATCAAGAAGAAAATcTTGACAGTAATTTATCAATAATAAGTGAATCTAGTGTTGATTATATGACAAAATTTGCTCAAATAACGGCCGAACTGAAAGAACGTGAaggtgaaattaaaaattaa
- Protein Sequence
- MDQEVLNNPTRFNDDSLSDGYIINEQRISTVNPILSVNKICEIEAKKLISVSNSTSKSSSLSLKESNELLGSVTTFTPTCGPDSGHTVRTSARVIQKMRLDSIRPPTPPIVEKKDQIKEEKPGPKTPNQIKSNRNAWTHTDTIFFFEALNEYGKDFESIAHYVNTKSKRKNSSNVTFKTRDQIRIFYYQSLQKVSKYLKFSEDVKKLAQELYALINYGEMRKKLIFVNEKSLMKLRDLVYKGWVTIRSKGRNIKIKTPSCKALRQLNQLEEWQEEIKLPPRIEVLMKPFNVETWGKVHNIAQNPRVKMTLPIQRRVSSILKTLQLKWKIQDFRLCDKSMTLQPNSATSIAFVENAPIIRILPPPNAVIHRPMVNITEFLSSHRICLNSYEERIGVKVKGETLCSERINSLKEMMKTNSKRQRNDSNSDKKSPEFKKLKLDYDIKPLEPCEKLEIYLNTSHMFNPSSDCNDLVKSSGDEGDQCNDEDIKNEKYLSDNEDIKSESYMSSQKMGENCDSENDNEMRNEDKHNMSPKDFKFEDSLVSTKKKIKKSKKNIRKNSNYIKPLISEETLKLVREGWTLSNIGDITIGDLYVMFGNDLKLNLEYAITTNNMSVDRSAELTRDVSANISICGPSLNGGDIQIETITIKTQNDKCENDKIENLLGTKLRQLMLIASLMEQKKKKTSGCICGHNCERNVRLKKTDDFTGSYIANKTHMSNQNDNYVFRPPTIPIRSSLPVTEPYKHLSTNSNNQHLQPKLAKLKNRQTSSSKQVVVKRILQLHPNNESPALGENKTSTSSLTQQTQNNDNFEIKVDTSSSPLNAVIDIAINTIRNKNSSSSDQNTITSYTSSTSDLIDTNFDMPDLENNQTTDIKCLLDVQDASTINMIIDEKTKSEQSYINLSLAASSKETSLSHLNEDTSINTEWLSSDINDFSFSSFLGHLDNLAENSRKERNQEENLDSNLSIISESSVDYMTKFAQITAELKEREGEIKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01458284; iTF_01054269;
- 90% Identity
- -
- 80% Identity
- -