Tlat013901.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tipula lateralis
Gene Symbol
lov
Assembly
GCA_963932295.1
Location
OZ010737.1:27537851-27579955[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.4e-18 9.7e-15 55.1 0.0 1 44 722 765 722 766 0.96

Sequence Information

Coding Sequence
atggcaAATCAAGAGCACTACAGCTTGAGATGGAATAATCATCAGAATCATATATTACGTGCATTCGATGCCCTACTACAAACCAAAACCCTTGTTGATGTAACCCTAGTGTGCGCCGATATAAGTATACGTGCCCACAAGGTTGTACTATCGGCGTGTTCGCCATTTTTTCAACGTGTTTTTAGCGAAACACCATGCAAACATCCGGTTATTGTGTTAAAAGATTTTCGCGGCTGGGTCGTCCAAGCGATCGTTGATTTTATGTATCGTGGCGAAATAAGTGTACCACAAGAACGTTTACAAACATTAATACAGGCTGGTGAATCGTTACAAGTGCGCGGTTTAGTTGATCATCCGGTCGCTGGTAATACGCCAACGCCAGCCGCATCGCCGGAcgattttaatagtttaatagaCGAAAATATCGAACCAAACTATAATAGTCAAACGACAAAATTACTATTACCAACATTGCCGGTATTTGTGGATACGACAACGATTGTCGGCCATACGagtataaatagtaataataatttatcgaatCCCGATATTTGTACATCGCCAATGCCGCGAAGGAAGCAGGCGAGGCCGCGTCGCCGTTCGGGCGAGTGTGCACCGCAGGATTTAACATCGAAGCCGAGTACACCAATACCACCGCaactatcaaataataatagtttgaaTAGTAGTATTAGTAATTGTAATATTAGTagtagtaacaataataataacaatagtgaTAACAACAACAGTGAAAATCTAGATAAAAccgataaaattatgaaaacgtTGTCGGACAATTTGAAAAAGCTgaaaaaagttgaaaaaaatttgaagcTTATGAAAACCGAAACGCCGGACGATGAGCCGGGCTTCGAGGACGACGATAACGATAGTAATAATAATCTAAATAGTAATAATACCGATCGTGataatgataacaataataataatgtggaCGAGGACGAGGAGGAAAATATGGAGGAGGAGGAGGATGTGGACGAGGATATAATCGATGGTGGCGACGAGGACGATGATATGGATGAGTCGCAGAATTCGATTGAGGGGCCCGAAAATTTATGTATGAAAAGTAATAAGAACAATAGtggtaatataaataataataatattagtaatattaGTGGTAATATTAATAGTGAAAAtgataaactaaattttaatagtTCAAGGGACAATCCaagcaataataatagtagtagtagtagtaataataataataataatagtggtaatagtaatctaaataataacaataatagtcgAATAGTGTTATCATTGAAAGATATTCGACATTTGAATCGATCAACGTCATCGTCATTACATCGACCACATTTACCTACATTACCGCCGCCACCaaatagtagtagtagtagcagTAGTAGTGGAATATTACACGGTCACCATATACCACCGCCGCCGCCTCAAATCCTGCCCCAAATGCATCACCATcaccaccatcatcatcattcgAATACGAATAAAAATCATGGCAATATGCAACTGTCGCCACCACTTTTAACATCGACACCAAACCAATCGTCGACCAATTTACCAACCAGCCAAccgttaaatttaaacaatcattcATCATCGAATCTACTGCATTCggtgaacaatttaaaattggaGGCGCACGATGATGGACGcgatccgatggagcatcgcgAAAGTCCATTTATCGATCAGCTCGATTTGCCACAGCTAGCCCATCACAATTTGTTGCACGGCGGCCATGGTATGGAACATTTGACCGGGCTAAGTAAAGAGTTTAAAGATTTTAAAGAGTTTAAGGATTTTACGACGGCCAGTATGGGGCTACCACATCATTTTGGTCATAGCAGCGAGCCGGGAAACGGGCCGGGGAGCGGACTAGGTCACCATCATCCGAATAGTCCGCTCAACTTTCCACACATGCCATCAGTATCGGCGCTAACGTTAACACCACCACATaTGTTCGGCCTAGACTCACCACTAGGATTATTTCCACCGGGAATGGATCCCGGCAAATTATATAGTCCGCTAATGGAAATGTCAGATCCACGTGGTGGGATGCATCCTGAACCACCGCCATTTCTCAAGAAAAAAATGAGTCGACCAAAAGGACAGCATTCAGCACCACGTGGTGGCCCACCCCGTTCATGGACAAATGCCGAACTAACCGAAGCCCTACAACatgtatggaacaaaaaaaTGACCACAAGTCAGGCATCGCGAATATTTGGCATACCATACAATTCGCTACTAATGTATGTGCGCGGTAAATATGGCAAAAGCCTAAAATTGGAACAACTACGAAAAGACTGTATAAGTGGCCCACCCATCGAACTGCTAACAATGGgcattaacaacaataaaaattcatcgcaaaacaaaaaccatcatcatcatcacgacAACAGTAGCAATATCaaagatgaaaatataaatacaaatttaccaCGTTCGGCATCATCCGAACCGGATCTAATATCGAGTCCGACAATGTTTAATCCCTTTCCGCCCGGTTTCTATCCCGATTTTGCGAGCGGTTTTCCCGGCCTACCGCTAAGTGTACTCAATCTATTGCCACCCGATCGGCACAGCCAACATCATGCGAGCAATATGTCGATCGACGATGATTGCAAAAGCGATCGGTCGAAGCAATCGATCGAGGATGATTTTCCGACGCAGCCGTTGGCACTGAATCGGGACGAACGGCGCGAATTGCTACACGCACAAAATGGGCaggaatga
Protein Sequence
MANQEHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCADISIRAHKVVLSACSPFFQRVFSETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVDHPVAGNTPTPAASPDDFNSLIDENIEPNYNSQTTKLLLPTLPVFVDTTTIVGHTSINSNNNLSNPDICTSPMPRRKQARPRRRSGECAPQDLTSKPSTPIPPQLSNNNSLNSSISNCNISSSNNNNNNSDNNNSENLDKTDKIMKTLSDNLKKLKKVEKNLKLMKTETPDDEPGFEDDDNDSNNNLNSNNTDRDNDNNNNNVDEDEEENMEEEEDVDEDIIDGGDEDDDMDESQNSIEGPENLCMKSNKNNSGNINNNNISNISGNINSENDKLNFNSSRDNPSNNNSSSSSNNNNNNSGNSNLNNNNNSRIVLSLKDIRHLNRSTSSSLHRPHLPTLPPPPNSSSSSSSSGILHGHHIPPPPPQILPQMHHHHHHHHHSNTNKNHGNMQLSPPLLTSTPNQSSTNLPTSQPLNLNNHSSSNLLHSVNNLKLEAHDDGRDPMEHRESPFIDQLDLPQLAHHNLLHGGHGMEHLTGLSKEFKDFKEFKDFTTASMGLPHHFGHSSEPGNGPGSGLGHHHPNSPLNFPHMPSVSALTLTPPHMFGLDSPLGLFPPGMDPGKLYSPLMEMSDPRGGMHPEPPPFLKKKMSRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIELLTMGINNNKNSSQNKNHHHHHDNSSNIKDENINTNLPRSASSEPDLISSPTMFNPFPPGFYPDFASGFPGLPLSVLNLLPPDRHSQHHASNMSIDDDCKSDRSKQSIEDDFPTQPLALNRDERRELLHAQNGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01054456;
90% Identity
iTF_01457505;
80% Identity
iTF_01457505;