Tlat017035.1
Basic Information
- Insect
- Tipula lateralis
- Gene Symbol
- kn
- Assembly
- GCA_963932295.1
- Location
- OZ010737.1:89742331-89744046[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-95 2.4e-90 304.7 0.1 249 385 22 158 14 161 0.97 2 2 3.2e-09 0.00012 21.6 13.0 422 503 161 245 158 274 0.71
Sequence Information
- Coding Sequence
- ATGAATACTAACGCCAATTCTTGTTCTCTTTTCATTACTTCAGGTTTATATCCACCACTGCCAATAGCACAACCGTGTATCAAAGCAATATCGCCCAGCGAAGGTTGGACAACAGGTGGTGCACAAGTCATAATTGTTGGTGATAACTTTTTCGATGGACTACAAGTTGTTTTCGGCACGATGCTAGTGTGGAGCGAATTAATAACGTCGCATGCTATCCGAGTACAAACTCCACCGCGTCATATACCCGGTGTCGTTGAAGTTACATTATCGTATAaaagtaaacaattttgtaaGGGTTCGCCTGGACGATTTGTGTATGTTTcgTTGACTGAACCAACAATAGATTATGGTTTCCAAAGGTTACAAAAACTAATACCTCGACATCCGGGAGATCCAGAAAAATTACCAAAGGAGATTATATTAAAGCGTGCAGCCGATTTAGCCGAAGCTCTATATTCAATGCCACGATCGCCAGGTGGATCGACTGGTTTTAATTCGTATAGTGGACAGTTGGCGGTTAGTGTGCAAGATGGTGGTGGACAATGGGGTGAAGatgATTATCAACGAGCACAAAGTAGTAGTGTTAGTCCTCGCGGAGGATATTGTAGTAGTGCATCGACACCTCATTCGTCCGGTGGTGGATCGTATGGTGGTGGTGGTAATGGATATGGGCCAGCCCCAAATATGGGCGCTCTATCATCGTCACCGGCTAGTGTTTTTAATTCGACTTCAAGAGGACTTGTAAATGGCTTTAATCCATTTACGTTGCCAACATGCAGTACTCAAGGATATACATCAAGTCCTCTAGTCACATcatcaaaataa
- Protein Sequence
- MNTNANSCSLFITSGLYPPLPIAQPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLTEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSPGGSTGFNSYSGQLAVSVQDGGGQWGEDDYQRAQSSSVSPRGGYCSSASTPHSSGGGSYGGGGNGYGPAPNMGALSSSPASVFNSTSRGLVNGFNPFTLPTCSTQGYTSSPLVTSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455729;
- 90% Identity
- iTF_01163736;
- 80% Identity
- iTF_01454653;