Thel016050.2
Basic Information
- Insect
- Tipula helvola
- Gene Symbol
- gata4
- Assembly
- GCA_963556165.1
- Location
- OY744481.1:127804951-127806815[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-09 0.00014 24.2 0.1 1 21 6 26 6 27 0.94 2 2 1.7e-18 4.6e-14 54.6 4.9 1 35 68 101 68 102 0.98
Sequence Information
- Coding Sequence
- ATGGAGGGACGTGAATGTGTTAATTGTGGAGCTGTACAAACGCCATTATGGCGCCGTGACGGTACCGGCCATTATTTATTGGCCGCTGGTCAGAATACGGATTTCTATAAGAATTATTATGCATTTAATCCTTTGCCAACTCGAACTACTGAGGAAAAGACTAGTCGACGTTTgagTGCACAACGCCGTATGGGATTATCGTGTACAAATTGCCAATCAGAAAAGACTTCATTGTGGCGTCGAAATACCAGTGGCGAACCTGTTTGTAACGCTTGcggtttatattataaattgcaTGGTGTAAATCGACCATTAGCTATGAAGAAAGAAAATATACAAACACGTAAACGTAAACCAAAGGGAagtaaaaattcgaataataatGATGGGGAATCGGGTGCACCGGCTGGGAAAATGGCTCGATACAGttcaaatagtaataataatagtagtaaCACGAATAATAATATTGCGACAACAACAACAGCGAGTCATGATAcagAATATCGTACAACATCATCGATTCAGCATACTAACTCTTTGATTCATGGTGGCACAATTACGTCCGCATCAAATATATCACCTAGCCATGAAACTCTGTCACCATACTCGCCGACCACACCAACTGCAATCCAAagcacaattaaaaataataataattcgtaCAATCAAAAGAATCTCTTTTTACCACCAACCGTGCTTCAAAGTGTCGGCGGTTTCTCATCCAATTCGCATCTGTTACATTCACATCATATTTTAAGTCCAGAATATAGTCCGATACATTcaccaaataattttggattttttgacaTGATGTCACCAAATTTACCCGAGCACATAATCAAATTGGAGAATTCGCATAATAGCCACCAACATcatcataacaacaacaataatcatcatcatcatcataatcaGAATTCATCGTCGCATAGTCCATCGTCGGAAGATGAAGCCcatcatcataatcataataatacCAGTGTGGGAGATCAAACCGAATTGGCACCAATCGATTCACATATCATAAAATCAATTGATCGGCCAACCGTTGTTAAATTAGAATAA
- Protein Sequence
- MEGRECVNCGAVQTPLWRRDGTGHYLLAAGQNTDFYKNYYAFNPLPTRTTEEKTSRRLSAQRRMGLSCTNCQSEKTSLWRRNTSGEPVCNACGLYYKLHGVNRPLAMKKENIQTRKRKPKGSKNSNNNDGESGAPAGKMARYSSNSNNNSSNTNNNIATTTTASHDTEYRTTSSIQHTNSLIHGGTITSASNISPSHETLSPYSPTTPTAIQSTIKNNNNSYNQKNLFLPPTVLQSVGGFSSNSHLLHSHHILSPEYSPIHSPNNFGFFDMMSPNLPEHIIKLENSHNSHQHHHNNNNNHHHHHNQNSSSHSPSSEDEAHHHNHNNTSVGDQTELAPIDSHIIKSIDRPTVVKLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -