Thel032034.1
Basic Information
- Insect
- Tipula helvola
- Gene Symbol
- zfy1
- Assembly
- GCA_963556165.1
- Location
- OY744481.1:270669106-270670244[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.00078 0.84 12.5 0.0 12 44 126 155 115 155 0.88 2 6 1.8e-05 0.019 17.8 0.4 15 43 160 185 156 186 0.88 3 6 0.058 63 6.5 3.2 16 41 195 217 193 219 0.87 4 6 1.1 1.2e+03 2.5 0.4 17 29 252 264 241 275 0.79 5 6 4.3 4.6e+03 0.6 0.6 14 27 277 290 269 294 0.81 6 6 4.9e-05 0.053 16.4 0.9 4 38 296 330 293 334 0.76
Sequence Information
- Coding Sequence
- ATGGATGAATCATTGTGTCGTACTTGTTTGGTTGAAACCGATGGATctatatttaaaaccatttttctgGCTGAGAAACAGTTATCATTGGTTCAAATGCTTAATGAATGTACGGGATTAAAGgTGACCGAATCAGACGATgtatcattaaaaatttgtgatgcttgtactgaagaaataataaattcttatgTGTATCGTAAAAAATGTTGGGACTCACATAATTTTCTGTTAAGGCGATTAGAGGAAAGCAAAACACACAGTGTCCCGATAAAATGTGAAGCGGTAGATCCTACGGAAAATGATGTAGCCCCAATATTATTAGATATAATAAAAGAAGAATTTGATGATTCTATATTAAATGAAACGGAACTGACTGATGGAGGTGCTGTGAAATGTGAACTATGCGATAAGATCTATCCACGTAGAAAATTAATGCTTGACCATTTGCGTAAAGACCACAACATACTCGAATACCAAAGGTATGAGTgtaaatattgtgaaaaattaTTGAGTTCATTCAGCAATTTACGACGGCACATTGCCACTCTTCACGAAGTAGCCGAGGAAGGATATGGTGCAAAATTTGTATGCCACCATTGtggtcaaataacaaaaaatcggaGAAATTTGATTCTTCATGTGAGGCGACACACCGGCGAAAAGCCTTACAAATGCGATTTATGTGATTATCGTTCAGCCCGAGATACAGATATAGCTAATCATAAGCGGACACATACTAATGAGCGGCCATTTAAATGTGACACTTGTGGCAAACAATTTCGAACATCTAGTGCACGGGCGAACCATCGAAAGGGTCATTCCGAAGAAACGCCATATGAATGCAtcgtttgtttaaaaaaatttaaacataggAGGATTTACAAGAAGCATATGATTATTCATGACCCGGACAAGTATATAGCATGTAAATTCTGTGGCAAAGAATTTGCGCGGAAAGATAATCTAAACACTCACATGAAGCAGCACACTGACGAAAAACCGCATATCTGTGAATTTTGTGGCAAAGGTTTTATACAAAAACACTGTTGGCAGACTCACGTGAAAAATAATCACAATCAATAA
- Protein Sequence
- MDESLCRTCLVETDGSIFKTIFLAEKQLSLVQMLNECTGLKVTESDDVSLKICDACTEEIINSYVYRKKCWDSHNFLLRRLEESKTHSVPIKCEAVDPTENDVAPILLDIIKEEFDDSILNETELTDGGAVKCELCDKIYPRRKLMLDHLRKDHNILEYQRYECKYCEKLLSSFSNLRRHIATLHEVAEEGYGAKFVCHHCGQITKNRRNLILHVRRHTGEKPYKCDLCDYRSARDTDIANHKRTHTNERPFKCDTCGKQFRTSSARANHRKGHSEETPYECIVCLKKFKHRRIYKKHMIIHDPDKYIACKFCGKEFARKDNLNTHMKQHTDEKPHICEFCGKGFIQKHCWQTHVKNNHNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01456802; iTF_01460441; iTF_01460615; iTF_01456805; iTF_01456647; iTF_01456652; iTF_01456819;
- 90% Identity
- iTF_01456802; iTF_01460441; iTF_01460615;
- 80% Identity
- iTF_01456802;