Thel012789.1
Basic Information
- Insect
- Tipula helvola
- Gene Symbol
- kn
- Assembly
- GCA_963556165.1
- Location
- OY744481.1:101453737-101457181[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-95 8.9e-90 304.6 0.1 249 385 26 162 19 165 0.98 2 2 3.2e-09 0.00043 21.6 12.9 422 503 165 249 162 278 0.71
Sequence Information
- Coding Sequence
- ATGTCCGCTGTAGAAGAATATTTTGAAGAACAGGAGAAATCATTTTGTGTTGAtgGTCTATATCCACCATTGCCAATAGCACAACCATGTATCAAAGCAATATCGCCCAGTGAAGGTTGGACAACTGGTGGTGCACAAGTTATAATTGTTGGTGATAATTTTTTCGATGGGCTACAAGTAGTTTTTGGTACGATGCTAGTGTGGAGCGAACTAATAACATCGCATGCGATTCGGGTACAAACACCACCACGTCATATACCCGGTGTTGTTGAAGTTACGTTATCGTataaaagtaaacaattttgtaaaggTTCACCGGGAAGATTTGTGTATGTTTCATTAACTGAACCAACAATAGATTATGGTTTCCAAaggttacaaaaattaatacctCGACATCCGGGGGACCCAGAAAAATTACCCAAGGAGATTATATTAAAGCGGGCAGCCGATTTAGCCGAAGCTCTATATTCAATGCCACGGTCGCCAGGCGGATCAACCGGATTTAATTCGTATAGTGGACAATTGGCGGTCAGTGTGCAAGATGGTGGTGGACAATGGGGTGAAGatgATTATCAACGGGCACAAAGTAGTAGTGTTAGTCCTCGTGGAGGATATTGTAGTAGCGCATCGACACCTCATTCGTCCGGTGGTGGATCTTATGGTGGTGGTGGTAATGGATATGGGCCAGCCCCAAATATGGGCGCCCTATCATCCTCACCGGCTAGTGTTTTTAATTCGACTTCAAGAGGACTTGTAAATGGTTTTAATCCATTTACATTGCCAACATGCAGTACTCAAGGATATACATCAAGTCCTCTAGTCACAtcatcaaaataa
- Protein Sequence
- MSAVEEYFEEQEKSFCVDGLYPPLPIAQPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLTEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSPGGSTGFNSYSGQLAVSVQDGGGQWGEDDYQRAQSSSVSPRGGYCSSASTPHSSGGGSYGGGGNGYGPAPNMGALSSSPASVFNSTSRGLVNGFNPFTLPTCSTQGYTSSPLVTSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455729;
- 90% Identity
- iTF_01163736;
- 80% Identity
- iTF_01454653;