Basic Information

Insect: Tipula confusa
Gene Symbol: zfy1
Assembly: GCA_963556175.1
Location: OY744476.1:172654033-172655926[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0082 1.2 11.0 0.2 2 23 242 264 241 264 0.94

2 12 2.8e-05 0.0042 18.8 0.9 2 23 275 296 274 296 0.97

3 12 3.2e-05 0.0048 18.6 1.8 1 23 302 324 302 324 0.96

4 12 0.00012 0.018 16.8 2.4 3 23 338 358 336 358 0.95

5 12 0.00012 0.017 16.8 1.0 2 23 365 386 364 386 0.97

6 12 1.1e-05 0.0017 20.0 6.5 1 23 392 414 392 414 0.99

7 12 4.8e-06 0.00072 21.2 0.2 1 23 420 442 420 442 0.96

8 12 1.6e-06 0.00023 22.7 1.1 1 23 448 470 448 470 0.99

9 12 6.6e-06 0.00099 20.7 2.9 1 23 476 498 476 498 0.99

10 12 1.2e-06 0.00018 23.1 1.8 1 23 504 526 504 526 0.98

11 12 3.4e-06 0.0005 21.7 1.1 1 23 532 554 532 554 0.96

12 12 7.8e-08 1.2e-05 26.8 0.2 1 23 560 582 560 582 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0082	1.2	11.0	0.2	2	23	242	264	241	264	0.94
2	12	2.8e-05	0.0042	18.8	0.9	2	23	275	296	274	296	0.97
3	12	3.2e-05	0.0048	18.6	1.8	1	23	302	324	302	324	0.96
4	12	0.00012	0.018	16.8	2.4	3	23	338	358	336	358	0.95
5	12	0.00012	0.017	16.8	1.0	2	23	365	386	364	386	0.97
6	12	1.1e-05	0.0017	20.0	6.5	1	23	392	414	392	414	0.99
7	12	4.8e-06	0.00072	21.2	0.2	1	23	420	442	420	442	0.96
8	12	1.6e-06	0.00023	22.7	1.1	1	23	448	470	448	470	0.99
9	12	6.6e-06	0.00099	20.7	2.9	1	23	476	498	476	498	0.99
10	12	1.2e-06	0.00018	23.1	1.8	1	23	504	526	504	526	0.98
11	12	3.4e-06	0.0005	21.7	1.1	1	23	532	554	532	554	0.96
12	12	7.8e-08	1.2e-05	26.8	0.2	1	23	560	582	560	582	0.99

Sequence Information

Coding Sequence: atggctaataatttagatgaaaatttagaatttgataagatttgtcGAGGCTGTATGCATAAACAATTAGATATGAAACCACTTTACGGTTCATCATTAGACGAAATGTTTCGAACTGTTGTAAATGTTAACGTTTCAATGGGTGACGGATTACCAGAACAAATGTGCGTCCAATGTGTTTTACAAATAAGTCGGGCATTTCGATTTCGGCAGCAATGTGAAAAGATCGATAGTAAACTGCGAACGTATATGAACGAAGTGAAGAAGGCAATCGAAAATGAAGAATATAACGTACAGATAACGAACTTGAGTAATTTAGAAAATCCTAGTCGGCCACAAAACGATTTTACTGAAGCGAACAATGTTGCAAGTGTAcaggataatttaattttgattcaaaagATAGAATCTGTTGAAATGCATCACGATATCCATTATGATACGAACGTGCCCAATGAGGAGCATGCCATTGTGTTCGAAACAAATCTTTGCCATGATGATGGTAGTGCTGTAGAAGAGAATAACTTAGACTTAAATGATACCcagatacatattttaaagaatataaagGTTGAAGGTTTGCAACATGATATGCTCATCGAAAATTATGagacTTTTACAAACAATATCACTATACCGCTTATAGTAACCACAATCAATGATGACGATCTAGACGACGGATCAAAACCACAGGAAATTCAGTTGACTGAAGTAAAATCACTCGTTTGCCAAATATGTTTGATGAACTTCGACAACAATAACGACCTGAAAGAACATTGGAAAGAAACGCATTTAACAAATGATCATGTAACAAACATATTGGAGTGCgatatttgtaaaaaacaatTCGCCGACTATAAAGTTTTAAAGCGACATCTAAAAACGCATTCACCCGATAAACCTCATATTTGTCTTACGTGCGGTATGGCCTTCACCGAAGCATCAAAtcttacaaaacataaaaagaaacaTACGGGTGAATTACGAAATGTGGTCGGTAAACCGCATTTATGTTCCGTGTGTGGTAAACGTTTTAAATGGGCCAGCTCGCTGTCGAAGCACATGAAATAccatacaaaacataaaattttaaaatgtgaataCTGTCCAAAATACTATGTCGAGGCGCGCTCCTTGCACATCCATATGAGATCGCATACGGGCGAAAAACCCTATGTATGTCACGTGTGTCACAAAGGTTTTACCCAGACATGCAATTTGGAAAAACATTTACGTGTCCATACGGgtgaaaaaccatttttatgtaatatatgtgGCAAAGGATTTTCGCAAAGGGGCTACGTTGCAATACATTTACGAACGCATACGGGTGAAAAACCATACGAATGTAATGAGTGTGGTAAATGTTTTGCCGGTTCGAATACGCTGGCGATTCATAAACGAACTCATACCGGTATAAAACCATATACATGTTTTGTCTGTTCCAAATCGTTTGCGCGTCAAGAAACTTTATTAATTCATCATCGAACGCATACGGGTGAAAAGCCGCATGTTTGTTCAATTTGTGATCGAGCATTTTCAAGTTCAGGCCACTTATCGGGTCATATGCGGTCGCACACCGGAGTTAAACCACATGCGTGTACAATTTGTAATCGTAAATTTGCTGGCAGTAGTAGTCTTAAGGTGCATATACGATCGCATACGGGAGAAAAACCATACGTTTGTAATTATTGTGGGAAAGCGTTTGCCCAAAATTCAGCTTTATCCACACATCTTTTGACACATGAATCAATATTACCTGTAACTgagatacaataa
Protein Sequence: MANNLDENLEFDKICRGCMHKQLDMKPLYGSSLDEMFRTVVNVNVSMGDGLPEQMCVQCVLQISRAFRFRQQCEKIDSKLRTYMNEVKKAIENEEYNVQITNLSNLENPSRPQNDFTEANNVASVQDNLILIQKIESVEMHHDIHYDTNVPNEEHAIVFETNLCHDDGSAVEENNLDLNDTQIHILKNIKVEGLQHDMLIENYETFTNNITIPLIVTTINDDDLDDGSKPQEIQLTEVKSLVCQICLMNFDNNNDLKEHWKETHLTNDHVTNILECDICKKQFADYKVLKRHLKTHSPDKPHICLTCGMAFTEASNLTKHKKKHTGELRNVVGKPHLCSVCGKRFKWASSLSKHMKYHTKHKILKCEYCPKYYVEARSLHIHMRSHTGEKPYVCHVCHKGFTQTCNLEKHLRVHTGEKPFLCNICGKGFSQRGYVAIHLRTHTGEKPYECNECGKCFAGSNTLAIHKRTHTGIKPYTCFVCSKSFARQETLLIHHRTHTGEKPHVCSICDRAFSSSGHLSGHMRSHTGVKPHACTICNRKFAGSSSLKVHIRSHTGEKPYVCNYCGKAFAQNSALSTHLLTHESILPVTEIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -