Tcon029319.1
Basic Information
- Insect
- Tipula confusa
- Gene Symbol
- osa
- Assembly
- GCA_963556175.1
- Location
- OY744476.1:224654402-224665383[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 8.7e+03 -1.5 0.0 22 47 267 290 256 296 0.78 2 2 1.2e-24 7.2e-21 75.7 0.0 3 89 487 573 485 573 0.92
Sequence Information
- Coding Sequence
- ATGTCATTATGTTCGTATCTCGTACAATTAgaTCCCAGTGGACAAAATAGCAATGATAGCTCGAGTGGTGGAGGAACTGGATTGGGTACCACACCCGGTACACCTAATTCACAAGCTATGAGGCCTACTCCATCACCAACTGGTTCAACAGGTTCACGATCTATGTCTCCAGCTGTTGgtcaGCAAAGTGTACAGATGCCACCACGTCCTTCTAGTAGTCATTCCCAGGTCCCGAATCAAACACAGACGTcgaataatagtagtaataataacagtaatagtagtagtagtagtaataatagtaactCAAATCAAAATAACCAACAACCGCCATCGTCATTAGATCCAGCACTAGCGCCATCATCAGTACGTCCGCCAACAGCATCTATAACGCCAGTATCGGGCGGTGGAGGAGCTCAAGCAGGAGGTATGACAACAGCACAAGGTAGTTACCAACCACCACCGCCACCACCATCACATATGCATGGCTATAAAATGGGACCTAATCCGCAATCCGGTCCCCAAAATATGACGCCATATCCAACCCAATCACCATCACAGTATTCAGGAggaaattattcgCCACGACCTCATTATCCGGGTAATTATGGCCCACCGCCAACAGGTCAACCGCCAAATTCAAATAATATGCCACCAGGAGGTCCAACACAATATGGACCGGGACGACCAATGTCAAATCCTGTATCATTTCCTCCATACCAACAAAATTGGGGTCCACCAGCACCTCAAGGAAGTATGATTGGTAATCATGTTCCGGGTAAAGGTGCACCTCCACCTTCTTCGCCAGGTGGTTCACCGAGACCattgacatatttaaaacatCATCTGCAACATAAAGGTGGATATTCAGGTGCTCAGAGTCCAACACCGCCACAGGTATATGGTAATGGACCTGGTATGCATCCGCCAATGGCACCTCCACCTCACATGGGTCCACCAATGGGGCCGACAAATATGGGACCTCCATCGTCGGCACCACAAAACCAACCACCATCATCTGGACCAAATAGTCATCCTGACGGAAGTTTACCACCCCCACATTCCGACAGTTCTCAAGATAATGGAATTAATTCATCAAATAATACATCACATCCTGTTACCTCAATTGTTACAACGGGGCCAGACGGCACCCCATTAGACGAAGTTAGTCAACAGAGTACACTCTCAAATGCGTCAGCTGcatcAGGTGAAGATCCTCAATGTTCGACGACAAAATCACGAAAAAATGAATCGTATAATCAAACACATTTAGCGCCACCAACAGCATCGCCTGGTTCGCATGGGCCGCATGAAGATTTTGAAATGGGATCACCATCATGGCCACGAACTCCAGCTAGTCCTGTGTTTAATAGTCATGTGCCGCAAGAGACGTTTCGAACGTCGAAAaaatccgatagtttatgtaaattatatgaGATGGATGATAATCCAGATCGTCGAGGCTggttagataaattattaagcTTTATGGAAGAACGACGTACACCAATTACGGCATGCCCTACAATATCAAAAACGCCACTCGATTTATTTAGGTTATATTTGTATGTGAAAGAGCGTGGTGGTTTTGTTGAAGTGTGCAAgGTTACCAAAAGTAAAACATGGAAAGATATTGCGGGTTTGTTAGGAATTGGTGCTAGTAGTAGTGCAGCATATACTCTAAGAAAACATTACACTAAGAATTTATTAGCCTATGAATGTCATTTTGATCGTGGTGGTATAGATCCATTACCAATTATTCAACAAGTGGAAGCTGGGTCGAAAAAGAAATCAACAAAAGCAGCATCAGTTCCATCGCCagGATCATCAAATAGTCAAGATTCATTTCCAGCACCAGGTTCAAGTAGTGCTAGCATGGATGGTTATGGTGGTTATCCCGGCAATTATCCACCAGGTCAAGCGCCGAGTGATTATAATTCACCGACAATGCAAAGACCACCATCTCAAAGTAATACACAGCCACCACATCcaggtAATGCACCACCTGCTAGTGGCGACAATATCAGTGTGAGCAATCCATTTGATGATCCAGTTGGTCCCCCACGCGCCCCATATCAACAGGGTGCTCCATATCCCCCTGTATCGCGACCACAAGTGGCGCAGCAGTTAGCATATTTTTAA
- Protein Sequence
- MSLCSYLVQLDPSGQNSNDSSSGGGTGLGTTPGTPNSQAMRPTPSPTGSTGSRSMSPAVGQQSVQMPPRPSSSHSQVPNQTQTSNNSSNNNSNSSSSSNNSNSNQNNQQPPSSLDPALAPSSVRPPTASITPVSGGGGAQAGGMTTAQGSYQPPPPPPSHMHGYKMGPNPQSGPQNMTPYPTQSPSQYSGGNYSPRPHYPGNYGPPPTGQPPNSNNMPPGGPTQYGPGRPMSNPVSFPPYQQNWGPPAPQGSMIGNHVPGKGAPPPSSPGGSPRPLTYLKHHLQHKGGYSGAQSPTPPQVYGNGPGMHPPMAPPPHMGPPMGPTNMGPPSSAPQNQPPSSGPNSHPDGSLPPPHSDSSQDNGINSSNNTSHPVTSIVTTGPDGTPLDEVSQQSTLSNASAASGEDPQCSTTKSRKNESYNQTHLAPPTASPGSHGPHEDFEMGSPSWPRTPASPVFNSHVPQETFRTSKKSDSLCKLYEMDDNPDRRGWLDKLLSFMEERRTPITACPTISKTPLDLFRLYLYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPLPIIQQVEAGSKKKSTKAASVPSPGSSNSQDSFPAPGSSSASMDGYGGYPGNYPPGQAPSDYNSPTMQRPPSQSNTQPPHPGNAPPASGDNISVSNPFDDPVGPPRAPYQQGAPYPPVSRPQVAQQLAYF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -