Tcon029598.1
Basic Information
- Insect
- Tipula confusa
- Gene Symbol
- grh
- Assembly
- GCA_963556175.1
- Location
- OY744477.1:1071207-1096360[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-42 2e-37 129.9 0.2 23 170 443 586 430 588 0.93
Sequence Information
- Coding Sequence
- ATGTCAGTCAGTACTTCAGATCCATCAAATCCGGATAATATTGTCGAACATGTTCATGTTGCTTCGGCTGGCGGTGGACAATCGTTATATTTACCAGCGGCGCAAagatattttgatcATCCATTAACAGCTGCTACCTCGGCCATGTTAAACATTGGTGGAAATAATCAGAATTCGAATGAAGATGATTCGGGCAAcggaaataataataacaacaataatagtaattcaGTAAATTTAGGTGCAATCGGGACGCCACATCAAGTACATCAAATCCAGAATCCGAATGGAATCACGTCATTTGTATACGAGTATTATAAGACACAGGATAAAGATAATGGATTACAATGGAAtTCCCCTACTACAAAATTAAATGGACAAGCCACACCTCTTGATGTAACTGGCCtatcaaataatgaaatacaagGTTTATTATTAGGTTCACACCCAGCCGCAACAACAATTACATCgtcgtcatcatcatcgtcaccGTCATCGTCAACGCTATCAGCAgcgatacaaaatataaatgtcaaaCGTGAACCAGAAGATTTACGAAAAGAACCGAAATGTCATAATCGAAATCAAAAGGTTCTTGTTGTTCAATCACCAACACCTGCCATACAAATAAAAGAACAACCACCTAGCCCTGGAAGTCCAACATCAGAAGCAATGTATGTTGCCGGTGGTGGGACGCAGATTTATCTGCaggGTCCATCACAGCATCAAAATTCATCGTCAAACGGTTCGAACGTGAATACGAATACGCCAAGTCCTGGGCCATATGTATCCGAACAGTATGGCATGTACGCGAGTCGATTAACTCCGAGTGGATCGTTTATACCCGAACCATATTATCGGGAATATTTTCCGGGTAGTGATAACGGgcaaaattatatacaaacacGATCGATATATGCCGATGATGGGCCACAATCGGGGGCAATTTATGAAGGAAGGTTTTCGTCTCATAAAAATAGTGCGGGTGCGGTATACGCAAAAACTGTAACAGCTGCTGGACTAACGGTTGATCTACCAAGTCCTGATTCTGGCATTGGAGCTGATGCGATAACGCCGCGagatcaaaataatatacaacagtcATTCGATTACACAGAACTTTGTCAACCATCGTTACTCGATACGAATAATGGTATACCGGTAACAGTAAGTAATATTCAAAGAGCAGTTAGTGTGCATGGCGGACAAAACAGTCCGACAACCTCACTAACCGGGAGCACAGGCAATGGACCAAATCCGGCGTCACGATCTCGTCCATGGCATGATTTTGGTCGTAATAACGATGCAGATAAAGTTCAAATACCAAAAATATTTTCAAATGTAggatttaaatatcatttagaAAGTCCAATATCGTCGTCACAGCGTCGTGAAGATGATCgtataacatatataaataaaggaCAATTTTATGGCATAACACTGGAGTACGTTCCAGATCCTGAAAAGCccttaaaaaatcaaacagtaaagAGTGTGATAATGTTAATGTTCCGTGAAGAAAAGAGTCCTGAAGATGAAATTAAAGCATGGCAATTTTGGCATAGTCGACAACATTCTGTCAAACAACGAATATTAGATGCAGATACAAAAAATTCAGTTGGTTTAGTTGGTTGTATTGAAGAAGTAGCTCACAATGCAATTGCTGTGTATTGGAATCCACTAGAAAGCTCAGCTAAGatAAATATTGCTGTACAATGTCTGAGTACGGATTTTAGTAGTCAAAAAGGTGTTAAGGTAAGatatttgcttaaaatttaa
- Protein Sequence
- MSVSTSDPSNPDNIVEHVHVASAGGGQSLYLPAAQRYFDHPLTAATSAMLNIGGNNQNSNEDDSGNGNNNNNNNSNSVNLGAIGTPHQVHQIQNPNGITSFVYEYYKTQDKDNGLQWNSPTTKLNGQATPLDVTGLSNNEIQGLLLGSHPAATTITSSSSSSSPSSSTLSAAIQNINVKREPEDLRKEPKCHNRNQKVLVVQSPTPAIQIKEQPPSPGSPTSEAMYVAGGGTQIYLQGPSQHQNSSSNGSNVNTNTPSPGPYVSEQYGMYASRLTPSGSFIPEPYYREYFPGSDNGQNYIQTRSIYADDGPQSGAIYEGRFSSHKNSAGAVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQPSLLDTNNGIPVTVSNIQRAVSVHGGQNSPTTSLTGSTGNGPNPASRSRPWHDFGRNNDADKVQIPKIFSNVGFKYHLESPISSSQRREDDRITYINKGQFYGITLEYVPDPEKPLKNQTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKVRYLLKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01052942;
- 90% Identity
- iTF_01455428; iTF_01054085; iTF_01459241; iTF_01052942;
- 80% Identity
- -