Tcon035496.1
Basic Information
- Insect
- Tipula confusa
- Gene Symbol
- Ubp1
- Assembly
- GCA_963556175.1
- Location
- OY744477.1:97397395-97400309[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.74 1.7e+04 -3.9 3.9 92 132 78 125 64 144 0.46 2 2 2.9e-71 6.7e-67 226.4 1.6 6 221 148 364 143 366 0.91
Sequence Information
- Coding Sequence
- ATGGAAGCGAATATCTCGAAAAAGCTTTGTCGTATTCAATCAAGTAAtgGTCGACTAGGCTGGGCCGATGACATAGATTTAGATTTGAGCAGTGAACTATCAAATAATGGGTATATCAGCGAGGCACTATTAgcatttaattcacatttgacagtttttaaaCAAGAGATTCCATCACCAACACatgaaaaccaacaaaaaaataataacaacaacaataataataataataatagacaaCAGCGACAACAAGGCCAACAACAGCACCAACGTCAAGTGATAACCGAAAATCGTGaagtacaaaatattattgaaaagtCGGGTAGTAATTCGAgtggaaataataataacaataataataataataatagtgttagtaataataataacaaccaAAATTCTTCAAGTGGAGGGAATAATGAAAATGCTGGCACGGTACAATCGgcacaTCAATCCAGCCCAAATCAGAACGATATTGCAGTTTATACAAAACCAAATACAGACGAATGCAGATTTCAATACGTTTTGGCAGCACCAACATCGATTGCGACCAAATCCAACGAAGAAACGCTTACGTATTTAAATCAGGGACAaagttatgaaataaaattgaaaaaaattggcGATCTATCATCGTTTCGggggaaaattttaaaatcaatcataaaaatttgCTTTCACGAACGTCGCCTGCAGTATATGGAAAAAGAACAAATACAACAGTGGTTGGCATCACGTCCCGGCGAACGTATTATCGAAGTCGATGTACCATTATCGTACGGCCTTTGCCATGTTTCACAATCGATGAATGTAAATTTAGTTAATACCGTCGAAGTTCATTGGGATCCAATGAAAGAGGTTGGCGTTTATATTAAAGTGAATTGCATTTCAACGGAGTTTACACCAAAAAAACATGGTGGCGAAAAAGGTGTTCCATTTCGTATACAAATCGAAACATATTACGAAACGACACAAACATTTGAAGGAATTTTAAAGCCAATTCATGCTGCTGCATGCcaaattaaagtatttaaattaaaaggagCCGATCGTAAACATAAACAAGATcgtgaaaaaatacaaaaacgttCACCGTCGGAACAAGAGAAATATCAACCGAGCTGTGAATGTACAATTTTATCGGATATTCCGTGTGAAAGCCTTGTCAATCAACATTGTTATAGCCCTGAATTagTTCGTCCCACTGTTTCACCAATGCTTCCCGCATCGCCGGTGAATATGGCCAAATTTGATTCGATAATTCCCTATCAAAATGCAACCGCCCAAGCTCTTGGTAATTTGACCACGTCAACtccaaatttatgtaaaattattgatcaaaataTGTTGTCACCGCAACAAGTTGAAATGGAAGATTATattcccTCAATAACAAAAGAATCAACGCCCACCCAAATAGCACATTGGATGAATTATCATCGAATGACTGCCCATATCggattgtttacaaattttacaggTTCCGATTTATTACGTATGTCGAAAGATGATTTGATCCAAATATGTGGATTACCCGATGGGATacgattatttaatatattgcaTGCAAAaaccaTTACGCCAAGATTAACGATTTACGTAACCTTGGACTCTAATTCGTTTCATGCTTTGTACATGcataacaatacaacaaaagAGTTATCGGAGAAGTTGTATAAAATTCCCGGAATATTTGACATGAATTCcaataacaatagtaataacaatGGGAACAATAATAGTAGTAGCATGAACGGTGGCGAACTCCAATCAAAATATTCTGGCAGTGGTACCAACATATACGATGCaaccaaattacaaatttttttgaatggtCCATCAAGCATTCATGTTTTGGTCAACGATGAGGTACTATCGAATGTAAAAGATGAAAGCTTATTTTTACTTGATGTTCTAAATGGCggcaaaattataatgaaaccaatttataaaaatgaaattaatcttaattaa
- Protein Sequence
- MEANISKKLCRIQSSNGRLGWADDIDLDLSSELSNNGYISEALLAFNSHLTVFKQEIPSPTHENQQKNNNNNNNNNNNRQQRQQGQQQHQRQVITENREVQNIIEKSGSNSSGNNNNNNNNNNSVSNNNNNQNSSSGGNNENAGTVQSAHQSSPNQNDIAVYTKPNTDECRFQYVLAAPTSIATKSNEETLTYLNQGQSYEIKLKKIGDLSSFRGKILKSIIKICFHERRLQYMEKEQIQQWLASRPGERIIEVDVPLSYGLCHVSQSMNVNLVNTVEVHWDPMKEVGVYIKVNCISTEFTPKKHGGEKGVPFRIQIETYYETTQTFEGILKPIHAAACQIKVFKLKGADRKHKQDREKIQKRSPSEQEKYQPSCECTILSDIPCESLVNQHCYSPELVRPTVSPMLPASPVNMAKFDSIIPYQNATAQALGNLTTSTPNLCKIIDQNMLSPQQVEMEDYIPSITKESTPTQIAHWMNYHRMTAHIGLFTNFTGSDLLRMSKDDLIQICGLPDGIRLFNILHAKTITPRLTIYVTLDSNSFHALYMHNNTTKELSEKLYKIPGIFDMNSNNNSNNNGNNNSSSMNGGELQSKYSGSGTNIYDATKLQIFLNGPSSIHVLVNDEVLSNVKDESLFLLDVLNGGKIIMKPIYKNEINLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01455426;
- 90% Identity
- -
- 80% Identity
- -