Tfem006651.1
Basic Information
- Insect
- Tiphia femorata
- Gene Symbol
- nfxl1
- Assembly
- GCA_944319705.1
- Location
- CALUEQ010000151.1:153013-156115[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2 2e+04 -4.3 1.7 15 19 126 130 126 130 0.87 2 17 0.064 6.3e+02 0.7 0.4 4 10 161 167 160 167 0.96 3 17 2.3e-07 0.0023 18.0 13.8 1 18 175 191 175 192 0.98 4 17 1.3e-07 0.0012 18.9 12.5 3 19 230 246 229 246 0.92 5 17 1.5 1.4e+04 -3.7 0.7 6 10 271 275 270 275 0.73 6 17 9.2e-06 0.09 12.9 10.1 1 19 281 300 281 300 0.96 7 17 0.00021 2 8.6 9.1 1 18 335 352 335 353 0.97 8 17 2 2e+04 -7.0 10.6 1 12 387 398 387 399 0.86 9 17 1.2 1.2e+04 -3.4 1.7 6 10 408 412 408 412 0.97 10 17 5.1e-07 0.005 16.9 12.6 1 19 418 436 418 436 0.91 11 17 3.8e-05 0.37 11.0 9.1 9 19 484 494 482 494 0.90 12 17 0.0065 63 3.8 5.2 1 11 504 513 504 514 0.95 13 17 0.36 3.5e+03 -1.7 2.6 14 18 546 550 546 551 0.87 14 17 3.7e-05 0.36 11.0 7.8 1 12 587 598 587 598 0.97 15 17 2 2e+04 -7.3 7.7 6 19 614 624 613 624 0.64 16 17 0.15 1.5e+03 -0.5 0.1 3 9 639 645 633 645 0.66 17 17 2.3e-06 0.022 14.9 10.3 1 15 669 682 669 688 0.94
Sequence Information
- Coding Sequence
- ATGGAAAAATTTGTGCAAGCTCAAACCCGTAATTTACTTTCTATTGAAAGACATCTAAAAGCAAATGATTCATTGTACTCGTCCAGTGATGAGGAAGATGAAAAGTATGAGAACGATTTACAAGAAGCTGTAGAAAAAGTTTTATCAGCTTATAACGGCGAAGGTTTCGATACAGAAAAAACCATATCGTACTTAACTAATGTTTTTCAATCTGGTGGTGCAGTTTGCTTAATATGTATATCGACAGTTAAAAAAGAAGATCCGATTTGGAATTGTAACAAGTGCTACACTTTTATGCATTTATCTTGCATTTTACATTGGATTCGTGATAGTTTAGGCTATAAACGGGAGAAAGGAATTACACCTTTGTGGGGATGCCCAAATTGTCGTGCAGAGTTTACAGAAGAAGAAATACCACGCTTATATACATGTTTCTGTGGAAAAGTAATAGATCCTCCGTATCATCCATGGTCTCTGCCACATTCTTGTGGTGAAGTCTGTAAGAAGTTACTGGAACCACAATGTGGCCACAAGTGCGTGTTGCTATGTCATCCAGGTCCGTGTTCTCCTTGTGCAAAGATGGTAACAGCCAGATGTTATTGTGGTAAACAGACAGTTGATTCACGGCGCTGTAATGCTAAAGACTGGAGTTGCAAAACTGTGTGCAATAAAAAATATACATACTGTACGCACAGTTGCAAAGAAATATGTCATCTTGGAGACTGTCCCCCCTGCTCAGAAACTGTATCAGCGCAATGTCATTGTAAGAGTAATACTGAATTAAGAAAGTGCAATGAAGCCAAGTGGGATTGTGACAAACCTTGTCGTAAGTATTTATCATGTAATATTCACATGTGTGATGCAACTTGTCATTTACCAGGAGATTGTGGAACATGCCCACTTGAACAACAAACTTGTCCTTGTGGAAAGAAGCGATATACAGTTTCATGTAATTCTCCACATATGTCAACATGTGGTGACACATGTGACAAACTGTTAGAGTGTGGTACACACTTTTGCAATATGAGATGCCATTCGAACAAGTGTGGTCAATGTTTAGAAGTAGTAACAAAATTATGTCGTTGTCGCAGTTATAAAAAAGAACTTCCTTGTGGCAAAGAATTTCATTGCAATAAAAAATGCACACAAATGCGTCTTTGTGAAAGACATTTATGCAACAAAAAATGTTGCGATTGTGGAATAAAAAATTCACCTAATCTATGTGAAAAAGTATGTAATAATATTTTAAACTGTAGAAAACACAAGTGTTTAGCTCCGTGTCACAATGGACCATGTTATCCATGTACACAAACAGATGTAATACAATGTAGGTGTGGGAACAGTAAACTGACAGTACGTTGTGGTATTACAAAGCGCATTAAGACTCCAGTTTGTAATAAATTTTGTAAAATTCCACCAGACTGTCATCATAGTAAAAGGGAAACGCATAAATGTCATAGGGGTCCTTGTCCGCCTTGTAAGAAAACGTGTGGTTTAACACATAGTAAGTGTGGGCATACTTGTGCAATTAATTGTCATGCGAAAACATTGATTGAAAGAAATGGAACTAGAATGAAAGAATCATCTACTGATTTCTTCCAAAAACCAAAAAAAAAAGTTCAATTCAAAGTAATGGCATGTCCACCTTGTGCTGTTAATGTGCATATAACTTGTCTTGGTAACCATGAAACACAGCAGCTGGCTTGTCATCTGTCCAAGCCTTACTCATGTGGCAGGCTATGTGGAAAATTATTATCCTGTGGTAATCATACTTGTGAACTACAATGTCACAAACTGACTTTAAGTGACGATGATAAAGCAGACATTTTGTGCATGGACTGTGATAAACCATGTAAATGTGAGCCATGCAAGCACCTAGTGAAAACTTCTTGTCACTGTGGGATTATCATAATGTACCATCGCTGTGCTGAATTAACAGCTGCCACTGCGGAACAACGTATGGAGTTATTAAAATGTGGCAATAAGTGTCCAAGAAAGTATCCATGTGGTCACCGTTGTATGGATATGTGCCACCCTGGACCATGTTTAAATGAAGAAAGGTGTACCAAAAAAGTAAAGTTATGGTGTAAATGCAAACGAATCAAAAGGGAATTTATTTGTTCTTATTCGAGAAGATTATCATCCATTGTTGAATGTGATCTTGTTTGCAAGCAGTTAGCAGAGCAGAAAAGTCAGGAATACGAAGCCGTCGTAGCATTACGGCAACAGGCTGAAAATTTAGAAAATCAGAAGGAGGTAGAGAGGTTTGAGAGAAAATTTAAACTAAAGCATAAGGGAAGAGGGAAATCTCTGCACGAGCATTTACCAAATGTTAATTTAGATAATAGGTATAAAAATATTTGGATATTTGCTGTTTTCATCATAAGTATTATGACAAGTATTGTAATAAGTTATTTACATTACAGTACTTCATTCCAAGATGTTTACATTTTATAA
- Protein Sequence
- MEKFVQAQTRNLLSIERHLKANDSLYSSSDEEDEKYENDLQEAVEKVLSAYNGEGFDTEKTISYLTNVFQSGGAVCLICISTVKKEDPIWNCNKCYTFMHLSCILHWIRDSLGYKREKGITPLWGCPNCRAEFTEEEIPRLYTCFCGKVIDPPYHPWSLPHSCGEVCKKLLEPQCGHKCVLLCHPGPCSPCAKMVTARCYCGKQTVDSRRCNAKDWSCKTVCNKKYTYCTHSCKEICHLGDCPPCSETVSAQCHCKSNTELRKCNEAKWDCDKPCRKYLSCNIHMCDATCHLPGDCGTCPLEQQTCPCGKKRYTVSCNSPHMSTCGDTCDKLLECGTHFCNMRCHSNKCGQCLEVVTKLCRCRSYKKELPCGKEFHCNKKCTQMRLCERHLCNKKCCDCGIKNSPNLCEKVCNNILNCRKHKCLAPCHNGPCYPCTQTDVIQCRCGNSKLTVRCGITKRIKTPVCNKFCKIPPDCHHSKRETHKCHRGPCPPCKKTCGLTHSKCGHTCAINCHAKTLIERNGTRMKESSTDFFQKPKKKVQFKVMACPPCAVNVHITCLGNHETQQLACHLSKPYSCGRLCGKLLSCGNHTCELQCHKLTLSDDDKADILCMDCDKPCKCEPCKHLVKTSCHCGIIIMYHRCAELTAATAEQRMELLKCGNKCPRKYPCGHRCMDMCHPGPCLNEERCTKKVKLWCKCKRIKREFICSYSRRLSSIVECDLVCKQLAEQKSQEYEAVVALRQQAENLENQKEVERFERKFKLKHKGRGKSLHEHLPNVNLDNRYKNIWIFAVFIISIMTSIVISYLHYSTSFQDVYIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -