Tfem010971.1
Basic Information
- Insect
- Tiphia femorata
- Gene Symbol
- stc
- Assembly
- GCA_944319705.1
- Location
- CALUEQ010000317.1:595664-600146[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 2e+04 -4.3 1.6 15 19 513 517 512 517 0.81 2 14 0.13 1.3e+03 -0.4 0.2 4 10 546 552 545 554 0.94 3 14 1.7e-06 0.017 15.3 11.7 4 19 562 577 560 577 0.93 4 14 2.7e-05 0.27 11.4 15.3 1 18 613 630 613 631 0.91 5 14 2.2e-08 0.00022 21.3 10.4 1 19 669 687 669 687 0.98 6 14 1 1e+04 -3.2 0.7 5 10 716 721 716 721 0.94 7 14 1.3e-06 0.013 15.6 12.1 4 18 734 748 727 749 0.85 8 14 1.5 1.5e+04 -3.8 2.0 5 10 778 783 778 783 0.93 9 14 0.0034 33 4.8 11.2 1 11 789 799 789 811 0.90 10 14 5.3e-10 5.2e-06 26.5 12.0 1 19 816 834 816 834 0.98 11 14 2 2e+04 -4.6 1.5 6 10 863 867 863 867 0.87 12 14 2 2e+04 -5.9 8.7 10 19 881 891 873 891 0.74 13 14 1.4e-06 0.013 15.6 14.8 1 16 927 942 927 952 0.91 14 14 2.7e-06 0.026 14.7 12.9 1 19 959 978 959 978 0.97
Sequence Information
- Coding Sequence
- ATGGCAACCTGGGATGGGTCATACCCTTGTGAAGACCCGAACTATTTTTTGTATGCCGATCAAAATAACACCCCTTCCACTCCAAAGAATTGGACGTTCTTCCCTGGAAATGAAAGTAACACCTTTTATCATGACAATCGCAACATTTATCCATCAACGGAACCTATTGTGTTCGAGCAAAATATGCCTGCTGTCTATTATCAAATGAGAGCCGATGTTCCTTCCGGTCCATCTGTTACATCGGAGTTAGGACCTTTGTCGAATGTTTGTCAAGAGGCGCTACCGCGCGCCGATATTAATGTAAATGCTTCAAATGATTTGCAATGCTTTCCGCCGAACGTCAGACCGAGGAGTCAATACTTTCAGTATAACAACACGCAGTACGGTAAAAAAGAGAAGGGTTTTAAACCACCTAAAACCTTTCCTTTCCAATCTAATGCAGAACACATCGTGCCTACCTTAGTTGAACAATCTAGGTTACACGCTACAGCTAACGAATTTATACCGAACAATTCAAAATCCAAACCGGATGGAACCGAACTTCAATATGGACATTCGTCTGTGTCGGAAGGTTCATTCGGGGTACATATTGATGATTCCGGATCGAACGCTAGATCTTCTACGGTAAATTTTTCAGATAATAAGAGCAGATATGACAAGAAGAATTTGGCTTATAAGCAAAGAGATATGCAAAATCATATGTTCTTCAGGGGAACTATGCATAAGAATTCATTCAGAGTACAAAATGCTAAAGAATGTAATAGAATGCAAAATGATGAATATTATGCTAACAAGCATCACTTGAACAAGTCGTATGGAGATACTCAGGGTGGCAGGAAAAGAATGAACAGAGACGTAGCCACTTTCCAAACGAGTTCGAGTAGTCATGAATTTAGTAAAGACGGTGGATTATTAAATGCACATAGTACTATTGAAGAAAGTAAAAGACAGACATGCGATGGCACTTATGAAAATAATGGTTCAACGAGAAATGGTATCCACAGAATGGATAAGGCAAGAAAGTTTAATGTTCAGCGAAATGATGGCAATTACTTTAAGTATAATTCAAATAACGAACAATCTCAAGTTCCTAGAAGAGGCATGCGAAAGAATGTGGTTAATAATAAAATGGATAAATATGATAAAGACTATAAGGAAAAGAGAAAGGAAACTTCTAATAGTAAATTTAGTTATGATAAACAAGCTAAACCCGACCGAATGAAAGACAAAAGTAAATCTAAGGATATTACTCCAGATATGAAGGATAGAGATAATTTTAGTTGGAGACGTAAAGCAGAAAGCAATGATAAGGGAGGGATGTTAAGGCAAAGTAAAAAGAACGAAATAGATGATGACGCAAGCCAGCGTGAAAGACTCACAGAACAATTAAATAGAGGACAATTGGAATGTTTAGTCTGTTGCGAATATATAAAACAAATTGATTATATTTGGTCATGTTCAAATTGTTATCATGTATTACATTTAGATTGTATAAAAAAGTGGGCAAAATCATCGCATAGTGAAAATGGATGGCGATGTCCAGCGTGTCAAAATGTTAGTTCATTTATACCAGAAAAATACTTCTGTTTTTGTGGAAAAACACGAAGTCCAGAATGGAATCGTAGAGATGTAGCTCATTCGTGTGGTGAAATCTGTGGTCGATCTCGAAAAACTAATTGCGTACACAAATGTACTCTACTGTGTCATCCTGGTTCTTGTCCAGTATGCACAGCAATGGTAACAAAATTTTGTGGTTGCACTAGAAGCTCTCAAACACTACAATGTAGTGATTTAACTTTATTACACTGTGATGCTGTGTGTGCAAAAACTTTAAATTGTGAAAAGCACTCGTGCGAAAACAAATGTCACCATGGGGACTGCGGGTCTTGTGATAAGAAATTAGAACAAGAATGTTATTGTGGAAAAGAAAAAAGAGAAATTACTTGTCAGCCTAATGTATCACTTAAGTATTCTTGTAATAATACTTGCGATAAATTATTAGACTGTGGAAATCATCGATGCCAAAAGATTTGTCATTTAGATTCATGTGACCCATGCTCTTTAACACCGGAAAAAGTTACAACATGTTGCTGTGGACAATCTCCTCTGACAGAAAAACGAAACAGTTGTTTGGATGCTATTTCAACTTGTGACAAAATATGTTCCAAACGTTTAGCATGTGGTCAGCCTAACAATCCGCATACTTGTAAAGTAGTCTGCCACACTGGCGATTGCCCCGATTGCGAGTTCACTACAGATGTCAAATGTCGTTGTGGTAATATGGATCGAGAGATTGCATGTAAGGAACTAACGACCAAAGCAGATGACGCTCGTTGTGAAAAAAAGTGTACGAAAAAGAGGTCTTGTGGTAAACATAAGTGTAACCAGCTATGTTGTATTGATATAGAACATATATGCCCACTGCCTTGTCTGAAAACGTTAAGTTGCGGCAGGCACAAATGTGAGCAGAGTTGCCATAAAGGAAGATGTCTTCCCTGTTGGCGGAGTAGTTTTGAGGAACTTTATTGTGAATGTGGAGCTGCTGTTACGTATCCTCCAGTCCCTTGTGGTACAAGAAGACCAGTTTGTAATCAACCATGCTCTCGTGAACATGTTTGTGGCCACGAAGTGTTACATAACTGTCATAGCGATTCAACGTGTCCTCCGTGTACTGTTCTTACGCAGAAGTGGTGCTATGGTAAACATGAACTTAGAAGAGCTGTGCCATGTTATGTAAATGAGATTTCATGTGGGTTGCCATGTAGTAAACCTTTATCATGCGGCCGACATAAATGTATTACAATATGTCATCCTGGTCCATGTGAAAAACCAGGACAGATATGTGTTCAACCTTGTGTGATACCGCGAGAACTATGTGGTCATATATGCGCAGCTCCATGTCATGAAGGTGAATGTCCAGACGCTCCATGCAAAGAAATGGTTAAGgtaacgtgccaatgtggtcatagaagcatgacaagagcttgtgcggaaaattcccgcgaatatcaaagaatagccagcagtattttggcaagtaaaatggcagatatgcaacttggtcactcggttgacttggaagaggtgtttggacaaggagcaaagaaacaaaaccaattaaaaactttggaatgtaatgatgagtgtaaactgatagaaaggaatagaaggctagcattaggtttacaaattgttaatccagacttaagcggcaaattgatgccaagatacagcgaATTTATGAAGCATTGGGCTAAAAAGGATGCACATTTTTGTCAAATGGTTCATGAGAAATTAACAGAATTAGTTCAACTAGCAAAAACATCCAAACAAAAGTCAAGAAGTTACTCGTTTGATAGCATGAATAGAGACAAACGTCATTTTGTACATGAATCTTGTGAACACTTTGGTTGTGAGAGTCAAGCATATGATCTGGAGCCAAAAAGAAATGTTGTAGCTACAGCTGTAAAGGATAAGtgttggctaccaagttatagtttattggaaatagtacaaagagagaatggtcaaagaaaagtaccaggtccgatgcttaacCCGTCAAAGGGTAACAGTACTATAAAGACAGTTTTATCTTTACCTATAAAAAAAAATCAAAAGATAACTGCAGTGCCGATTACGTCGAGGTCTCCAGAACCAGAAATAGATTATTTCGATTATCAAGGTTAA
- Protein Sequence
- MATWDGSYPCEDPNYFLYADQNNTPSTPKNWTFFPGNESNTFYHDNRNIYPSTEPIVFEQNMPAVYYQMRADVPSGPSVTSELGPLSNVCQEALPRADINVNASNDLQCFPPNVRPRSQYFQYNNTQYGKKEKGFKPPKTFPFQSNAEHIVPTLVEQSRLHATANEFIPNNSKSKPDGTELQYGHSSVSEGSFGVHIDDSGSNARSSTVNFSDNKSRYDKKNLAYKQRDMQNHMFFRGTMHKNSFRVQNAKECNRMQNDEYYANKHHLNKSYGDTQGGRKRMNRDVATFQTSSSSHEFSKDGGLLNAHSTIEESKRQTCDGTYENNGSTRNGIHRMDKARKFNVQRNDGNYFKYNSNNEQSQVPRRGMRKNVVNNKMDKYDKDYKEKRKETSNSKFSYDKQAKPDRMKDKSKSKDITPDMKDRDNFSWRRKAESNDKGGMLRQSKKNEIDDDASQRERLTEQLNRGQLECLVCCEYIKQIDYIWSCSNCYHVLHLDCIKKWAKSSHSENGWRCPACQNVSSFIPEKYFCFCGKTRSPEWNRRDVAHSCGEICGRSRKTNCVHKCTLLCHPGSCPVCTAMVTKFCGCTRSSQTLQCSDLTLLHCDAVCAKTLNCEKHSCENKCHHGDCGSCDKKLEQECYCGKEKREITCQPNVSLKYSCNNTCDKLLDCGNHRCQKICHLDSCDPCSLTPEKVTTCCCGQSPLTEKRNSCLDAISTCDKICSKRLACGQPNNPHTCKVVCHTGDCPDCEFTTDVKCRCGNMDREIACKELTTKADDARCEKKCTKKRSCGKHKCNQLCCIDIEHICPLPCLKTLSCGRHKCEQSCHKGRCLPCWRSSFEELYCECGAAVTYPPVPCGTRRPVCNQPCSREHVCGHEVLHNCHSDSTCPPCTVLTQKWCYGKHELRRAVPCYVNEISCGLPCSKPLSCGRHKCITICHPGPCEKPGQICVQPCVIPRELCGHICAAPCHEGECPDAPCKEMVKVTCQCGHRSMTRACAENSREYQRIASSILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKLIERNRRLALGLQIVNPDLSGKLMPRYSEFMKHWAKKDAHFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNRDKRHFVHESCEHFGCESQAYDLEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNPSKGNSTIKTVLSLPIKKNQKITAVPITSRSPEPEIDYFDYQG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -