Tfem013688.2
Basic Information
- Insect
- Tiphia femorata
- Gene Symbol
- HIVEP1
- Assembly
- GCA_944319705.1
- Location
- CALUEQ010000542.1:191629-199673[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00014 0.013 16.1 0.3 1 23 130 152 130 152 0.98 2 8 0.02 1.8 9.3 2.1 1 21 158 178 158 182 0.86 3 8 0.016 1.4 9.6 0.0 1 21 395 415 395 416 0.96 4 8 1.5e-06 0.00014 22.3 1.6 1 23 1154 1176 1154 1176 0.99 5 8 1.7e-05 0.0015 19.0 4.3 1 23 1182 1206 1182 1206 0.92 6 8 2.1e-06 0.00019 21.8 0.1 2 23 1886 1907 1885 1907 0.97 7 8 0.0008 0.073 13.7 1.8 1 23 1913 1937 1913 1937 0.92 8 8 0.0014 0.13 12.9 3.3 1 23 1958 1982 1958 1982 0.93
Sequence Information
- Coding Sequence
- ATGATTACCTGGTTGTCGCCAGTTTCAGGATCCTCCGCGTATATTCCAAGAGCGCCGACGACGCTTAACCAGACCCACGCTGTGGCGATGACAGACCCACAATTGACcaacaataacaacaataataacaataacaacaacaacaacaacaacgatggcgagcCGAAGTATCTCCACAAGAAGTTCAAGAAGATGGCCACGAGCGAGGTCGCGCCGAGAGTCGTCGAGGCCAGGAGGGAGGGCACGGCCAGCGAGGGATCCACGGAGGCATCGAAGAAAAAGGATCCAGCGGTTACGAAGGAGCCCAAGGAGCAGCCCCTTAAGCAGCAGCAGGATCCTGCCCAGGAGGCGGACCTGGGCGAACCCACCGAGTCGAGAAAAAGCGGCTACGTTTGTCCTTACTGCAAGCTCGCCTGCGCGAAGCCAAGCGTCCTTCAGAAGCACATCAGGGCGCACACGAACGAGCGGCCCTATCCCTGCGTGCCCTGCGGATTCGCCTTCAAGACCAAGTCCAATCTGTACAAGCACTGCAGGTCGCGAGCTCACGCTCTGAAGATGGAGGGGGGCGATGCGAGCAAGGTGTCGGAGGACTCGGACGTAAGCCTGTCGGACAGCGCGAGCAATGGTACCGGCACCCCGCCCCCGCCACCGGCCTCGACGCCCACCACCGCCTCAATCTCGACGACGTCTACCGCCACCACCACCGTCACCACCTCCAAGACCGTGAAGACCGGCAAGATCTACAAGCCCAAGTTTCACACGGCCCTCCAATGCGTCAACAACGACGCGGAAACGTCTTCCCTCTCGTCGAGCTCTTCCAACGGTTCGTCATCCTGCGGATCCTCGGTGGCGACGAGCGTCTCGAAGCCGAACGCGGAACAGGTGCAGGAGCACATTGACAAGATCATCACGGACAATCAGGCGATCGTGGACGCGGTTGATCCGCGCTTGCACAAGCTCATGCAAAGGCAGCAGAGCCTGGTTGAGAGCAAGCAGAGCGACCAGCCTTTGAATCTCTCCTCGGCCGAGGAATCGTCGACCCGCAAGCGGTGCTACAGCGAGAGCTTCGCGCAGGAGGCAAAGGACGTATCACGGAGTACCGCAGACGGTGGCTCGATCATCAAGGATCTCTTGCTGAAGACGCGATCCGCGAACGCGGACGTGACCCCGGAGAGCGAGAACTTCGTCTGTCCATCGTGCAACATACCCTACACGAGTATCGACAATTTGGACGCTCATCGTAGGTACTACTGCAAGGGCGTGACGAGTCCTAAGCGTGCGGAGTGTCCCTTGGACATGGACAAGAGAGATCCCGAGTTCGAGCACAAGTCTTCCTCCGATTATTACGGCACCCTGCAGCCCTTGCCCTCGCCAGGTCCTCTCCTCGGCAACACCAGACTGGTGGACGCCTACGCGCCGCCACCCACCAAGAAGCAGAGATCGGACTCGGTACCGACCACTCTCAGATCCCTCGAGGAGCTGAGCAAGTATCCGAGGCCGAACTCGCTGCAGATGTTCGGCGGCGAGGTGAGGATATTGGACAACACGGGTGAGACGAAGACCATGAGGATCGAGCCACGGCAGAGCAATTCACCGAGCAGCGAGCACATAGTGAACAGCAAGTGCGTCACGACCTCCGAGACGGCCTCGATCGTGGTTAGGTCCGGTCTCCACTCCGGTGGCACCATGGTTCACAAGCCACCTGGCACACCAGCAGCAGCGAGCACGCCCAGCTCCTCATCCATATCTCTGTCGAGTACGACGAAAATGTTGGCGCCCATCATACCGAACATATCAACCCCCAACATAGCGCCCACCATGTCCTGTTACAACTATCTCGAGCCCCACTTGAACCCTCTGAGCAACATCACTGCCTACAATCCGCTGACGCTGTCCCAGACCGGGATCACGAGTATTCTTCACGGCGGCAAGGTGATACCGTACGTGCCCGGCATGCCGGGTCCGCACACCCTCGCCGGAGGTGGACCAAGCATAGACATATCTCCGGGTATAGTGTCCGGTGACGCGGGATACAAGGTGATACCGGGTCTCCCAGGTCTCCACATGATCCCACAGCCCCTGGATCTCGCGAGCCCCGTGAAACTTCAAACGCCCAACGTACCTGGAATACCTGGACCGATATCCGGCGCGCACGCCACCATCTTAGGCCAGCCGCTGGATCTCGCCAGTCCGGCCAAGGACTCGAAGCAACTCGGCTTCAAGGCGCCCGGCGCCGACGCCGTCAGGAGTGGATTGACGAGTCCGAAAGTTCCTAGCGTTAAGCTCGATACCTCTACGGATAAGTACCGTGCTAGAGCGCCGCTCACGCCAATCAGTGATCTCGGTAAGACGGAGCTGGACCGCCATATCAAGAATAACGTTGCCGCTCCTGCTGCCAAGTACAAGGGTATGGAGAGTCCGCGCGACAAGAGGCTCGAATTCTCATACGAGAATAGGAGCGGAAAGATGGAGAAGACGTACGGGTATTCTCCTAACGGGCTGCTGGACAGCGGCATTAATTCCAGCACATCTTACAGCAAGCTTCGATATTCGCCGAAAGCAGGTTCCGAGAGCAGAAAGCGATCTTGGAACGCGACGGGCGAGATGGAGTCTGGTCGAGCCGCTCTTGAATCGTTGGGGAGCAGTCCCAGTCCCAAGTACGATTCACCCCCGCCTCCTGTCGAGAACGGTAGATTAAAGACGAACTTTTCCGAGAGCAGTAGAGGAAAGGTGATCGAGAGCTACGGTACGGTGAATGGAGCCAGGCTGAAGCCTGATTCGGCGCCGCAGGTGATACTTGTCAACTTAGATTCTTCCAAGACCGAAGTGGTGCCAAGTAAAATCCCCGTAGAGCCGGCCGTTAAGGCGGACAAGTCTGAGAGCAAGTCGCAAAAGGTTGGCGACGCTGTTGCGGAAGAAACTAACGCTAGTAAATTTTTGAGGCCCACGTCCTTACCGTTGAAGCCCGGTACGTTCACGCCGAAGAAGCATCATGGGATCACCCCCACGGCTAACACGCTTCCGCTTATCAGTCCGGAGACGCCGCGTCCCAAGAAATCTTACGGACAGCTCTACTTGAACGGTCACGCTTATACGTATTTGGGCTTGAAGTGTTCGACGCGAGTATTTTACTGCACGTTGAATAGGCCGCAACCTATGTACGTTACGCAGCAACACGGCCTGTCGATGTACTCCAATTGGAAGATATGCAAAGAAGCTCCACCGGATGTGGACATGGCGCATTACGACTCCAGGCACCGGCCTCTTAATTACACGACCGCTTGGAGGAAGCAAGAGGACATTCTCACCCATTCCTCCCATCGACCAACCACCCCTACCAGTCCAGACAGCGGGCTAGAAAGTGACCTGCAAGAGAAAGCAAAGAGGATTAAAATATTCGACGGTGGCTTCGAGAGCAACGAGGATTACACTTACGTCAGGGGTAGAGGCCGAGGTCGTTACGTCTGCGAGGAATGCGGCATTCGCTGTAAAAAGCCGTCTATGTTAAAGAAACATATCAGAACGCACACGGATGTAAGGCCGTACACGTGCAAACATTGTGCATTTAGCTTCAAGACGAAGGGCAATCTGACGAAGCACATGAAATCTAAGGCTCATTGCAAGAAGTGCGTTGAGCTTGGCATTGTCCCGGTACCGACCACAGTTAGCGATGAGAATATCGATAAGGATGCGATTGCGCGGTTAGCCGCGAGCGATAATACCGAAGAGTCTTCGGAAGAGGAAGATGAGAGTGACGGGGACGAGAGCGAAGAGTCTGGAAGCGAAGAGCAGGAAGCAGCTCAAGGCTTGCTCAGTCTCTCGCAGCGTAACTCGAACAGATTGCCTGGACTGTTGCCCTCGCGAAGGCCAGCGACTTATCCTTACACGTTAACTTTCCCTCCTAGCACCGCAGTTACGAGTGTCGTATCAACTGCAATAACCACCATAGCCCCGTTGAGTAATCAGCCTACTAGCACCCAGGCGACCACGCTTATTCAAAATGAACTGTCCCATCGATACTACTTCTCGTCGAACCGAATGACCAGCGAGGAAACTCGAACCAGCGTTATACAATCCTCGAAGAGGGATGATTCGGATGTCGAAATAGAGGAAGTGTCGGAAGTTGAAACCCGGCATCACTTGTCGTCGCAACCGATGGACCTTACAACGAAGCAGGCTATTCCGTCGTTGCCTTCCCCGATACCGCAAAGGGCAAAACCCGCGGATATTCTGACGCCGGTTTCGGAACCGGTATTATTGCAAACCATTGTTCAAAGTATGGAGAGATTACCAATTCAAGGTAGAGAGTGGAAGCCAGACGCAGAGGGGCATATGTTGCAAGCATATCTTACAGAGAGACACGTTATGGATAGCAAAATGAAGCAACAATATCGAGTAGGAACTACGAAGGTCGATAAACATATTAAGGATAGAGACTTGTACCTGAAACATCAAGATTCCTCGCGATCGCGAAATATCGATATAAATGGAATTCCTACTGTTACGTATACAGATCCTACTAAGATGCAACAAACTTTTATGGAATCTCATGTCAAGCAGATGCCAAAGCACTCTACGGATGACGTTAAATTGGAGATTAGGGAGAAAATATATCACAACAGCGTAGCGATGGATAGACGTTCGTTTGACATGGATAAGGAACAGGCGCAGAGATTGGTAAGCGATACTGACAACAACGTAGAGCACAATTTGAAAAGTCCCGCTGGTACGAGGACAAATCTCGATTATGGCATACCTATGAGCAAAACGAGTACTCCTATTGTTGAAAGGAGCAGTTATGTCGCGGCATCGCCCACTCGTAGTACAATCAACCTGGACAACCATTCGCCTAAAAATTTTAATCTAGATGCTAATAATAGAATCGTGTCGATTGCGCATATAAATAGCGAAATTGATAGAAGCTCGATGTTTAATACAATGAAGATGATGAAGGAATTGGAGAGACCACGGGAGTGTCATGTGAGTAACCATGATGTGAGACCAATTAGTCGTGAATTAGGAAGTATGCCTGCGGACGTGAGGATGCAAAGTCAAAGTCCTCGTAATATCGATTTAAAAGCTTGTAACATCAGGGACAGGGACATCAGGATGCAAAACCAAGACTACCGAGGACAGAGTCAAGAGTTGCGCGTAACTAGCCAAGACTTCAAAGTGCGCGGTCAAGAGCTTAGGCCCCCTAGTCGAGAGTTCAAATCGTTTAATCATGATATGAGAATACCGCAAGATCTCATGCCACCTAGTCATGATGTACGACAAGTCAGTTCAGATAATAGACCTCCAAGTAGAGATATGAGATTATTACAGGATTACAGATCCCAGCCTCAAGAACCAAGGACCAATTTTGATGTTATACAATCGTCCATACACGATGCCACAAAGTTGCAAGAGCTTCCCAGATCACAGAATTTAGATGCACGAAGTACAGATCGTATAGATGCGAAACATAGCATTGAAACAGCGAGACAGAATATAACGGAGAGCATTAAACACACTGTAGCGCGAAAAGTAATGGTGGTGGGTGGTCCTGGTTTCAGATCACCATCGCCAACAACGGGCAAACCCCAAGCAGAATTTCTGCAGCCCTCGAGTGGTCCAGCACCAAATTATGTTAGTGTGACCGAAGACGGCAGAAGTGTGTGCGGTATTTGTAATAAGGTGTTCAGCAAGCCTAGTCAGTTACGGTTGCATATCAACATTCATTATTTCGAGCGACCATTTAGATGCGAGAGTTGTGCTGTTTCCTTTAGAACTAAGGGTCATTTGACGAAGCATGAGAGATCAGTTTCTCACCATAATAAGGTTAGCATGACCTCTACATTTGGCGCTGCCACTACTAGCAATCCTAGGCCATTCAAGTGTACAGATTGTAAAATAGCATTCAGAATACATGGACATTTGGCCAAGCATTTGCGAAGTAAAATGCATATTATGAAATTGGAGTGTTTAGGAAAATTACCATTTGGAACTTATGCTGAAATGGAAAGGTCCGGAGTGAACTTAAATGATATTGATACTACAGACTGTGATAATAGCCTTACTAGTCTTCAGATACTGGCTCAAAGGCTTTGCGAAAAAGATCCTAGTAAAATGGGTCAGTGGGATTCGGAGGCAGCCCCAAATCAAATTATTAGCGGCGGAGAAACCTCTTCGGATGAAGGCGAACCTATTCCACAACATGCAATTCATCAATATCATATTAAAGCACCGTCTGATACAGATGTGTCTCGAACATATCATGTGCCAATTGCTAATGAGGATGCAAAATCCATTAACGATGCTTGCCTCGGAAATCCTCACTTTAATCAACAAAGACGAGATGGCAGTATCAAGGATAGGCAAACTCATTCCTCTATTTCTGAGAGGTTTCAAATGGATGATCTGCGAAGCGAAGATAATATACAATCATATAAGTGCCAAGTCTGTGCAGTGTCAATGCGTAGCATAAATGAACTCCAAGTGCACTGTTTTGTTGAACATAATATCGAAACAGATACTAGTACAAATATTCATGGAGATCGAAGCATGAGTGTAAGTAGGGAAAAAGAGAATACACTGAAAAGAATCACAGAAGAATCTTCCATTAGGGAAGATCAAACTAGACAAATGGTAGAAGATACATAG
- Protein Sequence
- MITWLSPVSGSSAYIPRAPTTLNQTHAVAMTDPQLTNNNNNNNNNNNNNNNDGEPKYLHKKFKKMATSEVAPRVVEARREGTASEGSTEASKKKDPAVTKEPKEQPLKQQQDPAQEADLGEPTESRKSGYVCPYCKLACAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRAHALKMEGGDASKVSEDSDVSLSDSASNGTGTPPPPPASTPTTASISTTSTATTTVTTSKTVKTGKIYKPKFHTALQCVNNDAETSSLSSSSSNGSSSCGSSVATSVSKPNAEQVQEHIDKIITDNQAIVDAVDPRLHKLMQRQQSLVESKQSDQPLNLSSAEESSTRKRCYSESFAQEAKDVSRSTADGGSIIKDLLLKTRSANADVTPESENFVCPSCNIPYTSIDNLDAHRRYYCKGVTSPKRAECPLDMDKRDPEFEHKSSSDYYGTLQPLPSPGPLLGNTRLVDAYAPPPTKKQRSDSVPTTLRSLEELSKYPRPNSLQMFGGEVRILDNTGETKTMRIEPRQSNSPSSEHIVNSKCVTTSETASIVVRSGLHSGGTMVHKPPGTPAAASTPSSSSISLSSTTKMLAPIIPNISTPNIAPTMSCYNYLEPHLNPLSNITAYNPLTLSQTGITSILHGGKVIPYVPGMPGPHTLAGGGPSIDISPGIVSGDAGYKVIPGLPGLHMIPQPLDLASPVKLQTPNVPGIPGPISGAHATILGQPLDLASPAKDSKQLGFKAPGADAVRSGLTSPKVPSVKLDTSTDKYRARAPLTPISDLGKTELDRHIKNNVAAPAAKYKGMESPRDKRLEFSYENRSGKMEKTYGYSPNGLLDSGINSSTSYSKLRYSPKAGSESRKRSWNATGEMESGRAALESLGSSPSPKYDSPPPPVENGRLKTNFSESSRGKVIESYGTVNGARLKPDSAPQVILVNLDSSKTEVVPSKIPVEPAVKADKSESKSQKVGDAVAEETNASKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEAPPDVDMAHYDSRHRPLNYTTAWRKQEDILTHSSHRPTTPTSPDSGLESDLQEKAKRIKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCAFSFKTKGNLTKHMKSKAHCKKCVELGIVPVPTTVSDENIDKDAIARLAASDNTEESSEEEDESDGDESEESGSEEQEAAQGLLSLSQRNSNRLPGLLPSRRPATYPYTLTFPPSTAVTSVVSTAITTIAPLSNQPTSTQATTLIQNELSHRYYFSSNRMTSEETRTSVIQSSKRDDSDVEIEEVSEVETRHHLSSQPMDLTTKQAIPSLPSPIPQRAKPADILTPVSEPVLLQTIVQSMERLPIQGREWKPDAEGHMLQAYLTERHVMDSKMKQQYRVGTTKVDKHIKDRDLYLKHQDSSRSRNIDINGIPTVTYTDPTKMQQTFMESHVKQMPKHSTDDVKLEIREKIYHNSVAMDRRSFDMDKEQAQRLVSDTDNNVEHNLKSPAGTRTNLDYGIPMSKTSTPIVERSSYVAASPTRSTINLDNHSPKNFNLDANNRIVSIAHINSEIDRSSMFNTMKMMKELERPRECHVSNHDVRPISRELGSMPADVRMQSQSPRNIDLKACNIRDRDIRMQNQDYRGQSQELRVTSQDFKVRGQELRPPSREFKSFNHDMRIPQDLMPPSHDVRQVSSDNRPPSRDMRLLQDYRSQPQEPRTNFDVIQSSIHDATKLQELPRSQNLDARSTDRIDAKHSIETARQNITESIKHTVARKVMVVGGPGFRSPSPTTGKPQAEFLQPSSGPAPNYVSVTEDGRSVCGICNKVFSKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLTSLQILAQRLCEKDPSKMGQWDSEAAPNQIISGGETSSDEGEPIPQHAIHQYHIKAPSDTDVSRTYHVPIANEDAKSINDACLGNPHFNQQRRDGSIKDRQTHSSISERFQMDDLRSEDNIQSYKCQVCAVSMRSINELQVHCFVEHNIETDTSTNIHGDRSMSVSREKENTLKRITEESSIREDQTRQMVEDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -