Basic Information

Insect: Tiphia femorata
Gene Symbol: -
Assembly: GCA_944319705.1
Location: CALUEQ010000175.1:1251511-1255097[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.8e-05 0.0026 18.2 1.4 1 23 437 459 437 459 0.96

2 8 1e-05 0.00093 19.6 1.9 1 20 465 484 465 487 0.94

3 8 7.1e-06 0.00064 20.1 1.4 1 23 493 515 493 515 0.98

4 8 4.1e-05 0.0037 17.7 4.4 1 21 521 541 521 543 0.95

5 8 5.5e-06 0.0005 20.5 5.6 1 23 549 571 549 571 0.99

6 8 1.3e-05 0.0012 19.3 5.3 1 23 577 599 577 599 0.97

7 8 4.8e-05 0.0044 17.5 6.9 1 23 605 627 605 627 0.96

8 8 1.6 1.4e+02 3.3 0.6 1 8 633 640 633 640 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.8e-05	0.0026	18.2	1.4	1	23	437	459	437	459	0.96
2	8	1e-05	0.00093	19.6	1.9	1	20	465	484	465	487	0.94
3	8	7.1e-06	0.00064	20.1	1.4	1	23	493	515	493	515	0.98
4	8	4.1e-05	0.0037	17.7	4.4	1	21	521	541	521	543	0.95
5	8	5.5e-06	0.0005	20.5	5.6	1	23	549	571	549	571	0.99
6	8	1.3e-05	0.0012	19.3	5.3	1	23	577	599	577	599	0.97
7	8	4.8e-05	0.0044	17.5	6.9	1	23	605	627	605	627	0.96
8	8	1.6	1.4e+02	3.3	0.6	1	8	633	640	633	640	0.95

Sequence Information

Coding Sequence: ATGAACAGTGAGCAGCATACATTGCCAGCTACTACGCAGGCGCAACAAGAGGATGTAAACTCGGGTCAAAGTGGTCGTCCTTCATACCCAGGTGGTTTGGCTACTGCGACGAGTCTTGGCAATGTAGGGAGTACTCCTCATTCATCCACGGACCTGCGTGTAGGTACAGCTGTAGCATTAGCCTCCTCGGTAGCTAAGTATTGGGTCCTCACCAATCTGTTTCCTGGACCGCTACCTCAGGTCTCGGTCTACCACCATTCCCACCACAACTCCTCGCATAGGAGTGGTGGAAGTGGGGAGACATCTTCCAAAGAGCCAGCCTCCTCACTGAGCCAGGAAATGGTGTTAACTTCCAGTTCGCATCATCAGTCAACGCCTCAGCATCATCACCATCAGCCTCCAGTTAGCAGCAGTAGTCACCATAATTCTCTGCAGTCAAATGCACAGATACCGGTTTCTCTCCCTGGGCTCAATCTAGACGGTGCACATATCCCTGCAAGTGTCAGTCATTTGCAGGCTGCTCATGCACAAATGCAGCAACAAATGCAGGCGCAACAACAGCAGCTGCATCAGCAGCAACAACAACAGCAACCGCAGCAACAGTCACATCATCCATTGCAGACGCACCAGAACCCACAAAATAATGGACCAACAACGCATAATCAAAGTACACAGCGAGATGATAATAAAGTAAAAGATGAAGGTGGTAGTTGTACAACTGAACGTTGTAGTGATAATCAAGTTCATTGTCAAGTTCAGTGTGATCTCCAATTACAACCGCCGCAGGACTTACAGCAGAGCCTAATGCAGCAACAACAGCAACAAATTGGTGTTAATATTAGTGGAAATACTTCAAGTGAAAGTGGTACGCAGAATAATTCCGATAAGCCAGAGAAGGAAAAGGAGTTACGTCAACTGAATATGACGCAATTCCAAGTCCCAGATTTGAAACCTGGAGGTCATATGATGGACGTAAGAACAGCGGATGGGTCAGTTGTAAAGATTAGTGCTGGAAATGAACAAGATTTAGCCAAAACTTTAGGAGTTGAGATGGTACAAAATATGTACAAGGTGAATGTTGAAGATATCAACCAATTGTTAGCATATCACGAAGTTTTTGGAAAGTTACAAAGTGAAATAGCAGCAGGAACAACATTGGTAGGAAGTACAGTTCCTACGCAAACTGTTACCACTATTCAAAATGGAACACCAATTGTTCAGCAAGTGCAATTGAATAAGTTTGACATAAAATCGAGTGATGGCGAAGCAACACCAGGACCAAGTGCATCGCCAGTATCTGTTGGCAGTCATGCATGCGAGATATGCGGGAAAATTTTTCAATTTCGTTATCAGTTAATAGTACACCGGAGATATCATACGGAGAGAAAACCATTTACGTGTCAGGTATGTGGTAAGGCATTTTCGAATGCGAATGATTTGACGCGGCATGGAAAATGTCACTTGGGTGGATCTATGTTTACGTGTACAGTGTGCTTCCATGTCTTCGCTAATGCACCTTCATTGGAACGTCATATGAAGAGACATGCTACCGACAAGCCATACAACTGTACAGTTTGTGGAAAGAGTTTTGCTAGAAAAGAACACCTGGATAATCATACCAGGTGCCATACTGGTGAAACGCCATACAGGTGTCAGTACTGCTCGAAGACATTTACCCGCAAAGAGCACATGGTAAACCACGTTCGCAAACACACTGGTGAGACTCCACATCGATGTGATATTTGCAAGAAGAGCTTTACTCGAAAAGAACACTTTATGAACCATGTTATGTGGCACACAGGAGAAACCCCGCATCACTGTCAAGCCTGTGGCAAGAAGTACACTCGTAAAGAACACCTTGCCAACCACATGCGATCCCACACCAATGATACACCATTCCGCTGTGAAATTTGCGGTAAGTAA
Protein Sequence: MNSEQHTLPATTQAQQEDVNSGQSGRPSYPGGLATATSLGNVGSTPHSSTDLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHSHHNSSHRSGGSGETSSKEPASSLSQEMVLTSSSHHQSTPQHHHHQPPVSSSSHHNSLQSNAQIPVSLPGLNLDGAHIPASVSHLQAAHAQMQQQMQAQQQQLHQQQQQQQPQQQSHHPLQTHQNPQNNGPTTHNQSTQRDDNKVKDEGGSCTTERCSDNQVHCQVQCDLQLQPPQDLQQSLMQQQQQQIGVNISGNTSSESGTQNNSDKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKSSDGEATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQACGKKYTRKEHLANHMRSHTNDTPFRCEICGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00765890;
90% Identity: iTF_00865533;
80% Identity: -