Tfem005148.1
Basic Information
- Insect
- Tiphia femorata
- Gene Symbol
- -
- Assembly
- GCA_944319705.1
- Location
- CALUEQ010000107.1:382710-394062[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 6.7e-06 0.00061 20.2 1.0 1 23 224 246 224 246 0.98 2 31 0.0029 0.26 11.9 1.9 1 23 269 292 269 292 0.96 3 31 0.00014 0.013 16.0 0.5 2 23 299 321 298 321 0.96 4 31 0.59 54 4.7 3.5 1 21 341 361 341 366 0.92 5 31 0.0042 0.38 11.4 2.1 2 23 459 480 458 480 0.96 6 31 0.0038 0.35 11.5 0.5 2 23 487 509 486 509 0.91 7 31 0.00013 0.011 16.2 0.1 1 23 580 603 580 603 0.96 8 31 0.0086 0.78 10.4 0.4 1 23 609 632 609 632 0.96 9 31 0.066 6 7.7 0.8 1 23 645 667 645 667 0.97 10 31 2.7e-05 0.0025 18.3 0.6 3 23 712 733 710 733 0.96 11 31 0.0013 0.12 13.0 0.9 2 23 796 819 795 819 0.95 12 31 3.3 3e+02 2.3 0.0 2 23 828 850 828 850 0.84 13 31 0.36 33 5.3 0.0 2 23 857 879 856 879 0.92 14 31 1.4e-05 0.0013 19.2 1.2 1 23 887 909 887 909 0.98 15 31 0.49 45 4.9 0.5 3 23 943 965 941 965 0.83 16 31 0.00022 0.02 15.4 3.3 1 23 968 991 968 991 0.97 17 31 0.00048 0.044 14.4 0.2 2 23 998 1020 997 1020 0.95 18 31 0.00097 0.089 13.4 3.9 1 21 1047 1067 1047 1068 0.95 19 31 0.0029 0.26 11.9 1.8 2 23 1082 1103 1081 1104 0.93 20 31 0.47 43 5.0 1.4 1 23 1107 1130 1107 1130 0.94 21 31 0.032 2.9 8.6 1.4 2 23 1137 1160 1136 1160 0.91 22 31 3.3 3e+02 2.3 0.2 2 23 1168 1190 1168 1190 0.94 23 31 3.9 3.5e+02 2.1 0.0 2 23 1197 1219 1196 1219 0.87 24 31 0.24 22 5.9 2.7 2 23 1228 1250 1228 1250 0.96 25 31 7.3 6.7e+02 1.2 0.5 2 23 1256 1278 1256 1278 0.89 26 31 0.12 11 6.8 0.3 1 23 1339 1362 1339 1362 0.95 27 31 0.0011 0.1 13.2 2.2 1 21 1390 1410 1390 1411 0.95 28 31 0.53 48 4.8 1.3 2 23 1512 1534 1511 1534 0.93 29 31 0.47 43 5.0 0.6 2 23 1541 1563 1540 1563 0.94 30 31 0.74 68 4.3 2.5 1 23 1574 1596 1574 1596 0.97 31 31 0.81 74 4.2 0.1 3 20 1605 1622 1603 1624 0.95
Sequence Information
- Coding Sequence
- ATGGAGGCAAGGGAACGCTATCACGAGCTCTGCCGACTCTGCGCTTCTTACGACGCCGTCAAGATGGATATCTTTGGCCGAGAGGGCAAGAACAGGCAGCTCGTCGATAAAATTCAGACCTGTCTGCCCTTCAAGATCACTGAAAATGATCGTCTCCCAAAGTGTTTGTGTTATCGTTGCATGTACAACTTGGAAAACTTTTATGACTTCCGGACGGCGTGCGTTAATGCTGTGGCTTTGTTGGAAAGGTGCTTACCATCGAGCGAGGTGATAGGTGACACGACTATGGAAAGCTCCGTGCAGCGTAGAAAATTAAATTCCGAGCTTTTAAAGGAAAAAGAAAGTATGCCTATATTGATACCCGAAGCTCCCATAGTAAATCCTAACGCAGCCCTGGGAACACCGCCAAGATTGAATTCGGATGGCGAAGCTGATAATGAGATCGAAGGCATACTCGATAATAGCAGTACCGACGAAGCTACGGTTGTAGATGATTCTGAAGATCGAAAGTCTGACGAGTACGAAATGGATATGGAGACAAATCCGAGTGATTTTCTTGAAATGACACCTATGGTGACGGAAGATAATGAAGTGTTAGACTCGAAGAACGCGTCGGCGAATGCTCGGGAATCTACAACTCCCCAATTGCCAGTAAAACATCACGAGGTCTATGTCTGTTCTCTCTGTAACAAGGCATTCAGTTCGAAAGGTCATCTATCTCTTCATGCAAGAATTCATGTAGGTGCAGGTGACGTGATCGGAGAAAAAGTTATCACGGATGATCATACATCCTATAAAAGACCATATCAGTGCGACCTGTGCAACAAGTCTTACTCGACTGCGAAGCATCGTTGGGGTCACGTATCAACCACGCACAGGGGACATCCTGCTGTAACTTGTGGATACTGTTCCCGAATTTACTCAACGAGAACAAACCTGGAAGAACATATAAAGTCACGACATGCAGGTCTGCCTGCACCTCAAGAACTCTCTGCGCCGATTGTTCATTCCGATAACAGACATCAGTGTAAACACTGTCAGAAACTATTTGGAAGTGTGATGGACCTCAGTACGCATAATCGTGTTTGCATTGGACATCAGAAACCACAGTTTCTTGAGAACAATGAACTGCAGATTGATAAGGATTTAATCGACACTTCCGATATTTCAAGTATCGATACGGATGAGGATAATAAAATTTACAAGAATGCAGAAGCGAAATTAGCCAAAAATCCTCAACTAACTATACTTAAACAAGCTCTTACAAAAGGTGATAGTTTAAAGCGAGACTTTGAAGACAAATCAAGAACAAATTGTAAGCTGCTGAAAGTTGCGAATACAGATAGTTGCGAAACAGATGCGCAAAAGAGATGGTATTGTGAATCGTGCCCTCATTGTTTTACATCAGTGGATGACTTGAAGGAGCACGAACAAACGCATGATACAGACAAACCTTTTATTTGTATATTATGCAATAAAGATTTTGTACTCAAGTCCTCGTTGAGCAGACACATTTTAACATCGCATGGTGTAGATCCATCCCCTTTTGCAGATAGTGATAAATGCCTAAAGAAATCTGTTGTTACCCAAACTTGGAATGAACAAAAGCAAGTGTCTGTTTATGAGCAAAAGTCAACACCAACATCTTTAAAGGTGCCTATACCATCAGAGGTGAATTTACAACATGTTGATAATCCAGAGGTTAATCATGAAAATATGATAGAAGTAGAAACTGTATTTGTTTGCGAAATTTGTACACGAGATTTTAATGACCGAGCATCACTATGGTTGCATATACGAGCCACACATAAGGAATTTGCTGCTTTTGCCTGTGGGGTATGCTTAAAAATTTGCTCAGATAATGCACAACTTTTAAACCATGTTAATATGTACCATGGAGGATCTAAACTTTTAATATCTGAACAAAGAAGATACAGCTGTACAATATGTGGCAGGCAGCATGATTCACGAAAAAAATTAATCGCGCATGTATCAATACATAACATTGATCCGGCCTATGACCCGGCAAATTTTGTTCAGTTGAATACTAATTATTACACCGAAAATGTAAATGAAAATGATGGAAATGATCACACCGTCGATTATGATGTAGAAGACGGAGACAAAATTGATTGTTATATATGTTACAAGTCATTTCCAAATGAAGATCATCTTATACGACATCAACGCAATGCTCATAAGGCTGAACAAATGGTATCTATAGGAGAATCATGTGAAAATGGAAATACTGCTAATATGAATGGTAACTGCAATCGAGCACAGTATCATTTATTTTTTGTCTGTGAACTTTGTGGTAGTTCACATCCCAGTAAATGGGAACGTTGGTTGCATGTCAGTGGTTTGCACAGTAATGAACCTACAATCAAGTGCGAACGAGAAGATTGTGGGAAAATTTTTGCAACAAAATCATTGAGAAACGAACATATTCAACATCACTTAATTCAAGGTGCTTCGCCCAACACATGTGAAATCTGTGGTAAATTGTGGGGTAGCCGTGTTGATTATTGGAAACACGTAATGGGAGTGCATTCAGATACAGTGCCTTTAATTTGTGGAGTTTGCTTGAAAGTTTTCCCAGATGTTTTAGAATTGAGTGCACACGTAAAAGCCAAGCATTGGCCATTGACTAATGGCGATTTCAGTTGTGACATATGCGGTAGGCCATACTCCAATAAATCAAAAATGTCTAGACATCGGAAGATTCACGGTTTGGAAGGGGATGATTATGATATTAGTTGCATTAATGAAACGACAAATGAATCTTTCAAAGTGGATCACACTACGGCGACGGAAGTTGGATTAAATTGTGAATTGTGCGCTGATATGAAGTTTCCACGTTTGGAAGACTTGTGTAATCATCGACGAATGGTACACGGTCTTTTCCCATGCGATCTTTGCAATAAATGTTACGGCCGAACTTCTCATTTGTGGAAGCATGTAAATCGAGTTCATAAAGGGCATGTTGATATAACTTGCCCGTACTGTCTAAAGACTAGTGCGTCGAAGGATCATTTAGCTGCGCATATTGCTAAAATTCATAGGTACGAACCAGAAGTAAGAAGGGAAAGTCAAAACTGTGTAAATATGAAAACCGCACCCATGGAAGATGGTGCGCTACATTACTGCGAGAAATGTAATAAAGGCTTTCACAAGAGGTATTTACTTAGACGACATATGAAAGGTTGCCAAAATTATAGAAAGGATCCGGGTGCTCTCCTAACTCGCTGTCGTGCTTGTGAAAGAATATTTAAAGATCGTGCCAGTCTTCAGAAGCATATTGAGAATCATCACAGTACATACACTTGTCATTTATGTAATGAGACAATCACATCAAAATTGGGTATTATGACGCATAACCGAGTAAAGCATATGGACCATCCAGATTTAACTTGTGAATATAGCAGCTGTAAGAAACTATTTCGTACAAAGGAAGATTTGGAATCCCACAAGAAAGATCACAAATATCATAGTAATCCTAACGTTTGCGATTTCTGTGGCGATACTGTAGAAAATAAACTTAAATTAAAGATGCACGTACTGTCATTGCACCGAAATGAAATTGGTGTGTCATGTGGAGTTTGCCTTATCCCTATGAAGGACCCTAAAGATTTAAAGAAACACGTTGAAGACGTACATGAAAGTGTACTTTCAAAACCAAATACCTGTCAAGTATGTGGAAAGCAATATGCCTCAAAGTGGAAAGCTTTTGATCACACGAAGAAGTGTCATGGAAAAGTATTTAGGACATGTAAACAGTGCCTAGCAGTTTTTACAAATGACATAGATATACGAGATCACTATGAACATGTTCATAATGTGCCAAAAGACCAATTAATTGCTTTTGAATATCGTATGGATGCGAGATCAAAAGCAGACGATTATGATACGCCAGATGTCATAGTAAAGGAAGAACCGGATGAATTAGAATTTGACGAAGATTTATGCGATGATGATTCAAACGAATCAAAACGTAGAAGATCATTGTCCGATACATTCGATTGTGAAATGTGTCCTGAAATCTTTTTAAATTATGAAACGCTGTCGAAGCATTATCAAAATGTACATAACACAGACCCTGTACGCATGTTCAAGAAAAGAAAACAGGATGGTTCTAGTACTAAACGCAAAATGAGAAATAGGAAGAATTTTGAATGCGAAAATTGTAAAAAACAGTTTTGTACGAAGACCTTGTTCTGGAATCATATTAACATCTGTACTCGGCGAGGTGCTTCAAATCGTTTAAATATTCCAAATATGATACCAACATCGATTTTAGAGTCGCGCTTGAAAAATAATAATCAAATTGACAAAGAACAATCGGTTCCGCACATGACTGAATCAAATTTAAACATTCCAGATTTCAATCTATTTGAAGACATTAATATGCAATTATCAAATCAAAAGCCAGTACCAAACCTTATGCCACTATCACAAATTAAACCTCCTCCTAATATAAAATGTTCCCGGAAAGATTCCAGGAAGGTGTATGATGAATCTACAAACACAGAATGCGCATGCGAAGTTTGCGGTAAGCAATGGCCCGCCAAAAAGCATTTGTGGCAACATCTGATTAGATTTCACAGAGCAGAGGCAGCAGTAACGTGTGGCGTGTGTTTGAAACTTTGCAAAACTTACGAAGATTTGGCTGATCATCTGAAAGCTTTTCATGCTGCAATTTTGTCGAGCGAAGGAAATAATTTTACATGTAAAACATGCGGTCGATACCATAATGCAAGGAGTAAATTACTCTTACATATGAGCATTCATATCAATTATGTAGGGAGCTTTTGGTGCCCAAAGTGTCAACAGAACCTTGGAACTGAAAGTAAATTAACAGATCATATAGTAAGTTGTAATGCAAAGTCAGAGTTCGAGGACCACAGCGCAGAAAGTGCTTTAAAGAATGACGTCGATGAGAAAGGTAGTTTAATTGGTGACGAAATGTCCATAGCTGGTGAAGTTGAGGAAGTTGATTTTGAATCAGAAGTTGAAGAACAGGCaaatattcacgacgatactaatagcgagaatactgaaaatacagaagaatccgagagtgctaataacagtgctagttcaagtggtgatgaggatgatgaagacgatgttgatgaggaagatgataacgacggtgatgatgataatgacgaggacgacgaagaggtgggcaatgactcagaaagtgaatccagatctAATAGTGGAGCCACGGGAGAAGTTACTTGCAATTCTGATACCGATAATTCGGACTTGGATAATATAGGGGAAGTTGGGCACGACGTTGAAAATAAAGTTACAGGTACCATAAATTGTTTTCGAATACACAAAGATGAAACTGCGGTAAGCTTTACCGAGGAACACTATTTGGAGAAGGAAAAAATGATTATACAGGAGCAAGAAGACTCGGATAATACCCATAACTTGGTATTGCAAGCTCAGGAAGTGCCGTCTGAAGATATAGAAGATACAGATCAGTTATGTAACgtcgatgtaaaagaatctaatataccaagaaaaaatgacattcatttctcggataacgatgatgaagataacgaagaggaggagcaagaggaggaggatgacgatgatggtgatgatgacgatgatcatgacgagcacgatgaccatgacgacgatgaggaaggcgacgatgacgatgatggcccacctatattgaGTCCAATTATGCCTTTGCTTCTAGAACACGAATCAGAGGATCAAAATTCAATGGACCATATGAGGCATAAACTCAGTCCTATGATTCCACTATCTATTGATACGGATAAAGATTTAGACATGTGCGAGTTGTCGGAAATGGAGAACGTTGCGGAACAAGTGAATGCTTCTTCAAACTCTAATAGCGCACATTTTTATAATAATTCCATTGCTAATGAGACATTAAATGTAAACACATCTAGTGCTATGCAAAGTTTAAATTTTGTATCGGAAGATTTTGGAAATGGCAAAGCAGAGAACGAGATAAGCGAATCTGGAAACGAGGATGAACATGATGTCGCAATGATGGATGAAAATGACGAGTGTCATTCGATCAACAGGTTTCAGAAGTTAGAAAGTACCGAAGATATGGAGGACTATGAAGAAGTTTCTTTTGAGGAAAATTTAAATGATGAGATGGAAGTTGTTTCTGTATCTAAGAATAGCGAAGTTCAAATACACAACTTGGATGGAACCGTATTAATGCTAACGAATGATTCCGACGGTAATCAAATTCTAATTCAACAGAATGTACTGGCTATTAGAAACGAAGATTCTAGTACAGGAGCCACTGAATATATTTATGAAGAAAGCAATGAATATGACATGGATGAATATGATATATCTCCAAGCGAATCAGGCCACATGATACAGTCCGATGGAATGCCAGACACCTCACTTGTACAAGATGATTTAGAAAGAAACGATAGTACCGAGAAATGTAACGAAAAATGCATTAATGTGTTAAATGAGAGCGTGTGTGCCAAAAATGAAGAAACTAGGACATAA
- Protein Sequence
- MEARERYHELCRLCASYDAVKMDIFGREGKNRQLVDKIQTCLPFKITENDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPSSEVIGDTTMESSVQRRKLNSELLKEKESMPILIPEAPIVNPNAALGTPPRLNSDGEADNEIEGILDNSSTDEATVVDDSEDRKSDEYEMDMETNPSDFLEMTPMVTEDNEVLDSKNASANARESTTPQLPVKHHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPAPQELSAPIVHSDNRHQCKHCQKLFGSVMDLSTHNRVCIGHQKPQFLENNELQIDKDLIDTSDISSIDTDEDNKIYKNAEAKLAKNPQLTILKQALTKGDSLKRDFEDKSRTNCKLLKVANTDSCETDAQKRWYCESCPHCFTSVDDLKEHEQTHDTDKPFICILCNKDFVLKSSLSRHILTSHGVDPSPFADSDKCLKKSVVTQTWNEQKQVSVYEQKSTPTSLKVPIPSEVNLQHVDNPEVNHENMIEVETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLISEQRRYSCTICGRQHDSRKKLIAHVSIHNIDPAYDPANFVQLNTNYYTENVNENDGNDHTVDYDVEDGDKIDCYICYKSFPNEDHLIRHQRNAHKAEQMVSIGESCENGNTANMNGNCNRAQYHLFFVCELCGSSHPSKWERWLHVSGLHSNEPTIKCEREDCGKIFATKSLRNEHIQHHLIQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVLELSAHVKAKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLEGDDYDISCINETTNESFKVDHTTATEVGLNCELCADMKFPRLEDLCNHRRMVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHVDITCPYCLKTSASKDHLAAHIAKIHRYEPEVRRESQNCVNMKTAPMEDGALHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVKHMDHPDLTCEYSSCKKLFRTKEDLESHKKDHKYHSNPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHESVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTNDIDIRDHYEHVHNVPKDQLIAFEYRMDARSKADDYDTPDVIVKEEPDELEFDEDLCDDDSNESKRRRSLSDTFDCEMCPEIFLNYETLSKHYQNVHNTDPVRMFKKRKQDGSSTKRKMRNRKNFECENCKKQFCTKTLFWNHINICTRRGASNRLNIPNMIPTSILESRLKNNNQIDKEQSVPHMTESNLNIPDFNLFEDINMQLSNQKPVPNLMPLSQIKPPPNIKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKTYEDLADHLKAFHAAILSSEGNNFTCKTCGRYHNARSKLLLHMSIHINYVGSFWCPKCQQNLGTESKLTDHIVSCNAKSEFEDHSAESALKNDVDEKGSLIGDEMSIAGEVEEVDFESEVEEQANIHDDTNSENTENTEESESANNSASSSGDEDDEDDVDEEDDNDGDDDNDEDDEEVGNDSESESRSNSGATGEVTCNSDTDNSDLDNIGEVGHDVENKVTGTINCFRIHKDETAVSFTEEHYLEKEKMIIQEQEDSDNTHNLVLQAQEVPSEDIEDTDQLCNVDVKESNIPRKNDIHFSDNDDEDNEEEEQEEEDDDDGDDDDDHDEHDDHDDDEEGDDDDDGPPILSPIMPLLLEHESEDQNSMDHMRHKLSPMIPLSIDTDKDLDMCELSEMENVAEQVNASSNSNSAHFYNNSIANETLNVNTSSAMQSLNFVSEDFGNGKAENEISESGNEDEHDVAMMDENDECHSINRFQKLESTEDMEDYEEVSFEENLNDEMEVVSVSKNSEVQIHNLDGTVLMLTNDSDGNQILIQQNVLAIRNEDSSTGATEYIYEESNEYDMDEYDISPSESGHMIQSDGMPDTSLVQDDLERNDSTEKCNEKCINVLNESVCAKNEETRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -