Tfem001617.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tiphia femorata
Gene Symbol
ZNF335
Assembly
GCA_944319705.1
Location
CALUEQ010000030.1:95794-107250[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.0003 0.028 15.0 3.1 1 23 249 271 249 271 0.97
2 22 6.8e-05 0.0062 17.1 1.5 1 23 277 299 277 299 0.98
3 22 0.11 9.8 7.0 2.0 1 23 306 329 306 329 0.94
4 22 1.1e-05 0.001 19.5 1.0 1 23 335 357 335 357 0.97
5 22 1.3 1.2e+02 3.6 3.9 2 20 363 381 362 385 0.82
6 22 0.00066 0.06 13.9 2.6 1 23 392 414 392 414 0.94
7 22 1.6e-06 0.00014 22.2 1.2 1 23 418 440 418 440 0.99
8 22 0.045 4.1 8.2 1.1 1 23 446 468 446 468 0.94
9 22 7e-06 0.00064 20.2 0.6 1 23 474 496 474 496 0.99
10 22 1.8e-05 0.0017 18.9 3.2 1 23 620 642 620 642 0.97
11 22 0.0023 0.21 12.2 2.3 1 23 654 677 654 677 0.96
12 22 1.2e-05 0.0011 19.4 2.4 1 23 683 705 683 705 0.98
13 22 0.0044 0.4 11.3 5.2 2 23 711 732 710 732 0.96
14 22 6.2e-05 0.0057 17.2 1.0 1 23 1008 1031 1008 1031 0.97
15 22 9.3e-06 0.00085 19.8 4.2 1 23 1037 1059 1037 1059 0.99
16 22 0.0043 0.4 11.4 5.8 1 23 1068 1091 1068 1091 0.96
17 22 0.0015 0.14 12.8 1.2 1 23 1097 1119 1097 1119 0.95
18 22 4.1e-05 0.0038 17.7 2.3 1 23 1124 1147 1124 1147 0.96
19 22 0.00021 0.019 15.5 1.0 1 23 1153 1175 1153 1175 0.98
20 22 1e-06 9.3e-05 22.8 0.5 1 23 1179 1201 1179 1201 0.98
21 22 0.00032 0.029 14.9 4.7 1 23 1207 1229 1207 1229 0.99
22 22 0.00033 0.03 14.9 2.1 1 23 1235 1257 1235 1257 0.97

Sequence Information

Coding Sequence
ATGGGAATTCCGTTTGTAATATTCGATGGAGTTTTTGAAGAAATATCACGAATCAAGGTAAAGCAGTCGGTGTATAATGATTGTGGAGGATATCACATACACAAGAGAGTGATATTGTTCAAGGAAGATGCTCTTATAGAAGAGACGAATGACGAATTATTCCAGATATCTGATACTTGTCCAATTACTGAGCAACATTTCAACAGCACGGAAAAATTAAAGAATCGCGTCTGGGACACGCATCAAATATCCTATATGTGCAAGAAAGGTAGAAAGACATTTCCTACAGCGAAAAATCGTGATCAGCGCCAAATGGCTCATGATACCACCTCCTTAGCACTAGCATCTGCAAGTATTGTAGCAAGGCCGTCACGCATCTCAGGTGTTATGAAATTTGGCATAAAAGCAGAGATGAAAAATTACCTTTGGTACAATCCACTAGATCCACTTGGTCCATCTTTTCTGACAGTAAAACTAGGAGATGATTACTTTCGGATTCCAAAGTCTCTAAGTGTATTCATGATGAAGGAGCCGAAACCGAGTGAAGAGGACACGACTGAAGTAAAAACGGAGACCAAGGAGGAAGAAAGCAATACCAATCATATGCAAACACGGAGAACACGCAAAATGTTGAATAACGATTTTGAAGATCTGGACAACACTCCGCTGGACTTCAGGAAGAGGCAAGGAGAGAAACTGTCGAAAATGCGGCTACCCAGACACACCAGATTAAAGAAGAAGGCTCACACGTGTGAAATTTGCTATATAATATTCGATCGGAAGAGTAAGCTTACCAGCCACATGTTTAAGCACAGTAATTCAAGACCACATAAATGTACGGTCTGTTCAAAGGGCTTCAAAACAGGTGCCTATTTATCCAGGCACATGGAGATTCACGATGAACCCGCACAACTTCACGCGtgcaccctttgcgatttcaaggcgcgtacgaaaccatatttgaaaattcattatatcagaaaacacaccgaggattacaattatagctgcgaacaatgtgggaaaatgttcaagatccaatcagattacacgacgcacataaaggatcatgatacggagtcctgtgtctgcgacatatgcggtagctcttaccctagcaagagctctctttactttcataaacactacaagcacaagaccaaggtaaaggagttcgagtgtcaaacctgtagaaagaggtttaaaagccagaagaatctagacaaccacagtgagcttcacaaaatgaagtacgtttgtgagcaatgcggaatggaattcaaatttaaatacggccttacgaagcatctcaggacgcattctggagagaaatcctatctttgtgctatttgtggtaagacgtttggctgtctcagttcgcagaagattcatctgctgacgcatgtcggggaacgaccgtacgtatgcgatatttgtggacagagtttcacccaaagatcacctatgatgttacaccgaaggaagcaccctggcattcacccgccacCGCCGCCCATTAAGATAACGAATCTGCTCCATGGTGTACAGGACAAAATCATTGTGAATAGAAGTGCCAAGTGTATTCCACGCGACCCTCTTGAGCAAACGTACCTCGTTGTGAGAAGCAGCGACAACTTTTACCTCCTGCCGATCGCTAGTGGTTATACGTTTCCTAAACCTCCAGACGTGCCACTAAGAACGGAAACATTGCCTCCTAATAATCCCGTTGAGTTTACCGAGCAGAACATAAAGACAGAAGTGCCTGACCATAAAGAGAGTAAAGAAGATACAGGAGATGACTTCATACCAGTGATACATAATAGCAATTCTGCACTGCAAACAACGGTGGATAGTGTGTTTATGTGTCACCTGTGTAAAAAGATTTTCAGCGATCATAACAATTTACAAGCCCACCTGTTGATTCACAACCCCGTTCCCAAAACACGAAAGACCAAAGTGCATTATTGTACAGAGTGTAGTTTCAAGTCGAGTAGACCATCCACCCTGAAGGAACATCAGATAAGGGTACATGGGCAAGTCTATCAATATAAATGTCCACATTGTCCTAAAATGTTTCAACTTAGAGTATACCTTAAGAGACACATAAAATGGCACGACATTGAGAAGTGTTTCTGCGATGTTTGCGGTAAACAATGCCAAAATCAATCCTTCCTTCGTGCGCATAAACGTATTCATAAGACTAAAAGCGATGGCCGCAATTTGCCTGACGAAGAAGTCTCGATGGACGACATTCTACATAATATTAAGAAAGAGAACGATGAATCTGAAGTCGTTCAGACACCTGACCGTACGAGTGAAGAAAAAAGATTTAAACGACGTACCCGGAAAAGAACTGCTAAAAGGTGTAGAGAAACGCATGTCGTGGCTTTCCCAGGTGATCCCGAGCTCTTGGATTTATTGAAATCTGTAAATGCAAACAAAAGTAATTGCATTAAACTTCTTCCACCTAGCATTGTAAGCTTTTCTATAACTTTTTGCAGACAGCACATGTGTAACGCGCACTTATGGCTTATACGTTTTGAAATGGTCAAATATTCTATACTTTTTATTGTGTTACGTTACTCCAATAATGACATACTGAGCTTGTGCCAACGCGTTAAGAAAGATCCTCTGAGTGACACCGAAGTCACAAGTAATTGTAAATCTCAACGTACCATCATTCTTGGAAGAAGAGACTTTTCAACAAGGAGACGAATGTCGAGGAACGAAAAGTGTACTGACGAAGCTTGCAATTTAAACACGAATGACAGTCTTCCGAAAAAAGTAATTATTCGACACAGACTGAGAAAAATATACGGAGCAGCAAAAATAAATGAAAATCAAAAAGCAAAGAAGACAATTACGAGAAGAAAATTGGCAACGAAAAATGCTTTAAAAACGGGTACAATGCTTGATATGGCCAACCCCGCTTCTCCTGGTACACATGAGAGACTGCAAGATCCTGAGGACAAAGTACAGGATAAACAGGATCCACTTTATAAGAAGCTCAATGATGGTAATTATACCTGCGACATTTGCCAAACAACATTCGAGCAGAAGAGCAAAATTATGCGTCATATTATCAGTAAACACAGTTCGAATCGGCCCTTCAAATGTCCAGTTTGCAGCAAGACTTTCAAATACAGGTGCGATCTAAAGGCTCACAGACTCACCCACCAAGCCATAGAGTCAAGCCTACTGTATTGCtgcgacaaatgtgattatcgttccaagacgaagaataacttgaagagtcattacatcagaaggcataccgacgattacaagtttgcctgcgagcactgcggcaaacgcttcaaaatggaatgggacctcaagtttcacatcggcacgcacagcaattctcaacacatgtgcgatatctgcggaagattctataccagtagttattcgttatacaagcatcgaaaggtagcccacataaacgagtataagtttcagtgtactgtgtgtaataaaagggtactcacgcaagagaatctaaacaaccacatgcaacaacataacaggacctacgagtgcaaggaatgtggcaaagtgtttgcctcgaagagatatctggcgacacacgtaacaacccacacgggtattaagccatacacttgtaatatttgccaaaagaattttcgaacgtcccacatgagaaatacacacttgctgacacattcggcggagaggccgcatatctgcgatctttgtgggcaggcgttcaagagaaggtactacatgatcggccatcgtaggaagcatccagatgcgcatcTCTCATCACCTCCTGTACCTCTTGGCGTGAACGCAAATGGTAGTTTAGATTATAAGCACGATCTACGGAAAGAAATTCCTCTGACATAG
Protein Sequence
MGIPFVIFDGVFEEISRIKVKQSVYNDCGGYHIHKRVILFKEDALIEETNDELFQISDTCPITEQHFNSTEKLKNRVWDTHQISYMCKKGRKTFPTAKNRDQRQMAHDTTSLALASASIVARPSRISGVMKFGIKAEMKNYLWYNPLDPLGPSFLTVKLGDDYFRIPKSLSVFMMKEPKPSEEDTTEVKTETKEEESNTNHMQTRRTRKMLNNDFEDLDNTPLDFRKRQGEKLSKMRLPRHTRLKKKAHTCEICYIIFDRKSKLTSHMFKHSNSRPHKCTVCSKGFKTGAYLSRHMEIHDEPAQLHACTLCDFKARTKPYLKIHYIRKHTEDYNYSCEQCGKMFKIQSDYTTHIKDHDTESCVCDICGSSYPSKSSLYFHKHYKHKTKVKEFECQTCRKRFKSQKNLDNHSELHKMKYVCEQCGMEFKFKYGLTKHLRTHSGEKSYLCAICGKTFGCLSSQKIHLLTHVGERPYVCDICGQSFTQRSPMMLHRRKHPGIHPPPPPIKITNLLHGVQDKIIVNRSAKCIPRDPLEQTYLVVRSSDNFYLLPIASGYTFPKPPDVPLRTETLPPNNPVEFTEQNIKTEVPDHKESKEDTGDDFIPVIHNSNSALQTTVDSVFMCHLCKKIFSDHNNLQAHLLIHNPVPKTRKTKVHYCTECSFKSSRPSTLKEHQIRVHGQVYQYKCPHCPKMFQLRVYLKRHIKWHDIEKCFCDVCGKQCQNQSFLRAHKRIHKTKSDGRNLPDEEVSMDDILHNIKKENDESEVVQTPDRTSEEKRFKRRTRKRTAKRCRETHVVAFPGDPELLDLLKSVNANKSNCIKLLPPSIVSFSITFCRQHMCNAHLWLIRFEMVKYSILFIVLRYSNNDILSLCQRVKKDPLSDTEVTSNCKSQRTIILGRRDFSTRRRMSRNEKCTDEACNLNTNDSLPKKVIIRHRLRKIYGAAKINENQKAKKTITRRKLATKNALKTGTMLDMANPASPGTHERLQDPEDKVQDKQDPLYKKLNDGNYTCDICQTTFEQKSKIMRHIISKHSSNRPFKCPVCSKTFKYRCDLKAHRLTHQAIESSLLYCCDKCDYRSKTKNNLKSHYIRRHTDDYKFACEHCGKRFKMEWDLKFHIGTHSNSQHMCDICGRFYTSSYSLYKHRKVAHINEYKFQCTVCNKRVLTQENLNNHMQQHNRTYECKECGKVFASKRYLATHVTTHTGIKPYTCNICQKNFRTSHMRNTHLLTHSAERPHICDLCGQAFKRRYYMIGHRRKHPDAHLSSPPVPLGVNANGSLDYKHDLRKEIPLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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