Basic Information

Insect: Tineola bisselliella
Gene Symbol: -
Assembly: GCA_028551675.1
Location: JAPWLS010001783.1:43440-46402[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.035 1.9 9.1 1.0 1 19 268 286 268 288 0.93

2 9 0.0012 0.065 13.7 2.1 3 23 309 329 308 329 0.98

3 9 1.9e-05 0.001 19.4 0.2 1 23 333 355 333 355 0.99

4 9 0.058 3.1 8.4 0.2 1 23 360 383 360 383 0.86

5 9 0.0055 0.3 11.6 0.7 1 23 389 412 389 412 0.92

6 9 0.00014 0.0076 16.6 2.3 1 23 419 442 419 442 0.98

7 9 7.5e-06 0.00041 20.6 1.5 1 23 448 470 448 470 0.99

8 9 0.00052 0.028 14.8 7.5 1 23 476 498 476 498 0.98

9 9 8.7e-07 4.7e-05 23.6 0.3 1 23 504 526 504 526 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.035	1.9	9.1	1.0	1	19	268	286	268	288	0.93
2	9	0.0012	0.065	13.7	2.1	3	23	309	329	308	329	0.98
3	9	1.9e-05	0.001	19.4	0.2	1	23	333	355	333	355	0.99
4	9	0.058	3.1	8.4	0.2	1	23	360	383	360	383	0.86
5	9	0.0055	0.3	11.6	0.7	1	23	389	412	389	412	0.92
6	9	0.00014	0.0076	16.6	2.3	1	23	419	442	419	442	0.98
7	9	7.5e-06	0.00041	20.6	1.5	1	23	448	470	448	470	0.99
8	9	0.00052	0.028	14.8	7.5	1	23	476	498	476	498	0.98
9	9	8.7e-07	4.7e-05	23.6	0.3	1	23	504	526	504	526	0.97

Sequence Information

Coding Sequence: ATGAATTGTGATATAACCATCGAGGCTTTACCTTTGTTGGGTATTTGTAACTTGTGTTTGAAGAGTGGGGCTGTTGAAAGTATGATAGCTGCAAAAATAAATAATATGAAGTATTCCGATGTGCTTTTAAACTGTTTTGGAATTGATATATCTAAATTTAAATTAGGCGATGTGAAACAAGTAATATGTGCGGAATGCATAGAAAAATTAAGAAATTGTCAACAATTCAGAGAATTAGCTGAAAAATCGTTGAAAACTTTGGCAGATAGAGCTAAAGAAATTAAAAATGAGGATTTTGAAGATCACACATACGGCATTAATAGAGGTGATTATTTATTTTATTATCCATGTGTAGTGACCCCACGTATAAAAAAGGGGGTAGCGTTAAAATCTGAGTTGAGATTCACATCTGATGATGATGATGATGATGACTTCAATTGCGAAGATGATGAAGGTGAGTTGAAAGTCGGATCTGTATCTGTGTTCACGGGTGTAGCCACGGTGGCTCTGACCTGTCTGGCAGATTTAATAAAAGGTGTAAAGAGTGATGGCTTCTCCGATCACAGAACCAAAAGGAAAAGTCCCAACAGTGTTAGGGGCAATGAATATGTAAATCTGCTTAGTAGGGGCCTCTTTTTTTTTAAAACACTTAAAAATTACTACAGTTGCATTGTTTGCTCATATAAAAATACATCTCTAGATCCATTATTAGATCACATGAAAGAACACTCGACGAAATATATTCAAATGGGTTACAAAAAAAATGCGTGTAGATGCAACTTTTACCTCTCGAAAAACAAATTCTTTTGTAAAATCTGCTCGAAAGAAATTTCAAATTTCGAACAATTAAAACAACATTCGAAATGCGGTCCCAGTCCGAAGTGGGATAAGTTGCCATTCAAATTGGAGAAGAACCAATCAGATTGTCCGATTTGTAAAAAGAACTTTTTAAATTATTGCAGTCTAAACATTCATATGAACACACATTTCCCGCATTACGTGTGCGATAATTGCGGCAAGGGGTTCGCTTCTATGGTGCGTTTAAACACCCACGTGAGGACACATAAAATAGGTAATTTTCCTTGCAAAATTTGCGGACAGATTTTCGATAAAATGCCTAAGCGGGCTAACCACGTGTTGAAGGAGCACAAAGCCGGTGTCAAATATAGTTGTACAAAATGCACAGAGTCGTTTCCTTCTTTTTACGCCAGACAAAAGCATTTGGCTGATATTCACAATGAAGACTTGAGGAAGTATAAATGCAAGGCGTGTACTCGGTCGTACGTGACGTCAGGGCATCTCTCTTCCCATGTGCGCCGGGACCACTTGATAGAACGGAATTATAAATGTCAAAAATGTGAATTAGCATTTTATACGAGAGACTCTTTGAATACGCACATGATAAAGCATGATGGGCAAAGAATACACACATGCCATTTCTGTCAGAAGTCATACCAACGTAAGAAAACTTTGACAGAGCATCTGAGAATTCACAACAATGACAAAAGATTCGCGTGTCCGCTCTGTGGGCGCGCATTCACTCAGAAAAGTACTTTAAAAGGCCATTTGAAATTACATGAAGTTAAAACGGAGGGGGACAAACCGCAAACTAAGTCCGACTAA
Protein Sequence: MNCDITIEALPLLGICNLCLKSGAVESMIAAKINNMKYSDVLLNCFGIDISKFKLGDVKQVICAECIEKLRNCQQFRELAEKSLKTLADRAKEIKNEDFEDHTYGINRGDYLFYYPCVVTPRIKKGVALKSELRFTSDDDDDDDFNCEDDEGELKVGSVSVFTGVATVALTCLADLIKGVKSDGFSDHRTKRKSPNSVRGNEYVNLLSRGLFFFKTLKNYYSCIVCSYKNTSLDPLLDHMKEHSTKYIQMGYKKNACRCNFYLSKNKFFCKICSKEISNFEQLKQHSKCGPSPKWDKLPFKLEKNQSDCPICKKNFLNYCSLNIHMNTHFPHYVCDNCGKGFASMVRLNTHVRTHKIGNFPCKICGQIFDKMPKRANHVLKEHKAGVKYSCTKCTESFPSFYARQKHLADIHNEDLRKYKCKACTRSYVTSGHLSSHVRRDHLIERNYKCQKCELAFYTRDSLNTHMIKHDGQRIHTCHFCQKSYQRKKTLTEHLRIHNNDKRFACPLCGRAFTQKSTLKGHLKLHEVKTEGDKPQTKSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01453529;
90% Identity: -
80% Identity: -