Basic Information

Insect: Tineola bisselliella
Gene Symbol: -
Assembly: GCA_028551675.1
Location: JAPWLS010000719.1:102306-108259[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0033 0.18 12.3 1.2 2 21 198 217 197 218 0.92

2 11 0.0024 0.13 12.7 1.3 2 23 246 267 246 267 0.96

3 11 0.00039 0.021 15.2 3.0 2 23 273 294 273 294 0.97

4 11 0.00017 0.009 16.4 4.1 1 23 298 321 298 321 0.96

5 11 3.5e-06 0.00019 21.7 1.0 2 23 488 509 487 509 0.95

6 11 0.01 0.56 10.8 0.4 2 23 529 550 528 550 0.97

7 11 7.7e-07 4.2e-05 23.7 3.4 1 23 556 578 556 578 0.98

8 11 0.00025 0.013 15.9 1.5 1 23 583 605 583 605 0.97

9 11 6.3e-05 0.0034 17.7 3.0 2 23 612 634 611 634 0.95

10 11 0.048 2.6 8.7 0.3 1 19 642 660 642 661 0.85

11 11 0.011 0.6 10.7 1.0 3 19 674 690 673 692 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0033	0.18	12.3	1.2	2	21	198	217	197	218	0.92
2	11	0.0024	0.13	12.7	1.3	2	23	246	267	246	267	0.96
3	11	0.00039	0.021	15.2	3.0	2	23	273	294	273	294	0.97
4	11	0.00017	0.009	16.4	4.1	1	23	298	321	298	321	0.96
5	11	3.5e-06	0.00019	21.7	1.0	2	23	488	509	487	509	0.95
6	11	0.01	0.56	10.8	0.4	2	23	529	550	528	550	0.97
7	11	7.7e-07	4.2e-05	23.7	3.4	1	23	556	578	556	578	0.98
8	11	0.00025	0.013	15.9	1.5	1	23	583	605	583	605	0.97
9	11	6.3e-05	0.0034	17.7	3.0	2	23	612	634	611	634	0.95
10	11	0.048	2.6	8.7	0.3	1	19	642	660	642	661	0.85
11	11	0.011	0.6	10.7	1.0	3	19	674	690	673	692	0.95

Sequence Information

Coding Sequence: ATGAAATCAACATTAAAATACCCGGTGCTGTTTATGCCAAACAACCTTATAGACAATTTCAAATACAAAAACGAGAGCGAATGTCTAAATTTGACAATAAATCATGAAAATTCATTATTATACATTGGAATAGCGAACGTTAAATTCGTCGATCCTAACACTGACCTAACAACGTACTTGAAGGAAGAGTTCGATCTCAAATCCCTCAATTTGCACAATCTAAGCACTAACAAGTATCCTGAATATAACTACGGACAAAAAGTATTCAATGCTGTGGTAGAATCAGCAGACCCTGAGCTGTATGGGTTTCTGGATGGTACCGCACCGCTATCGCCTCTACACCCGAACGAGACTAATATCATCTCTGACTGGCAAGAGAACACAGCTTTGGTGCAACTGCTGAGCGCCCCAGGAGACAGAGAAACACCGAAACAGAGGAAGACCATCATATTCTCCGGGTCTGATGCCACACATGGACAAACCATACAGAAAATTAATGTTATAGATCCAAATGTCAAATGTTGTAATGATAACACTAATGATTCCAGTGGTGAAGTATCATTACTATCAAATAGTAATACAAAGAAAATTCACTGCGACAACTGCGATAGAACGTTCAAAGACAATCCGTCATACAGAGACCATAAGCAGAGGGTTTTGCGCAATCAGAGCAAAAGTAGCCTAACTGAGAGCTCGCAATCAGATATCAAACCCGACGTATTAGAGCTTACAAGGGAATGCGTCACGTGTAAGAAGATATTCAAATCAAAGGAGAAATACTTCGTCCATTTGAAAGGACACGGCAACCCCGACCGGGAATGTTTGGTTTGTCACAAAGTATTGTCTTCCAAGTCCAGTTTGAAGAACCACAGCAAGACGCATAACAGAAGGCACCAATGCGAGTTCTGTACGAAGAGCTTTAACAAGAAGAGCGCTCTAGAGACCCACACGAGCAAGATGCACAAGGACTACACCTGCTTCGTATGTTGTCGCATATGCCTCAATTTGGCCGATTTGAGAGCCCACTTAACCGAACACGAGGCGGAAACTAACATAACCGACGTCAATTTAGAATCACTGCTGCAAGAGCCGCCAATAGCGAATGAAATTGACGAAGATTTCTGTCTGCAGCAATTTATTGAAGTTGAAAACGAGGAAATCGTGGAGACGTTAAAGGATGCCTCTGCCGATAACAACTTGCTGTTAAATGACATTAATAATATGTCATTGGAAGATATTTTGCAAAATGAAGCTACATTCACTTTTGATGCAACGAACAATCCTGAAAGCGAGGACAGTTTCACACGCGCTCTTGGTGAGGTATCCGTGCCAGATTGTTGGGATCCTTTGGAAGGCATGAGCGCTGATGACATCTTCAGTTCCCTCGGAAGTGTAAGTGCTATGGACAGCACATTGCCCATTTCTCAAACGAATAAATCCAAAATGAAACAGCATTCTAAGTCTTGCAATTTATGCGGTAAAGGCTTCGACCGGAAAAGCGATCTCAAGCGCCACACAATCGAGCACATCGTCCGCGCCGTCCTCATGCGAAACCAAGTGACCGAGGAAGGCCGACTGCACTTGAAATGCAACCTTTGCGACAACGCATACAACGAAATAGACAAATTCAAAGCGCATCTCAGGTCGCATGCCAACTTAACAATATACGAATGCAAGTTCTGTGACAAGTCATTCAGTGACTCCAGCAACTTCTCTAAGCATAAAAAAGTCCATAGCAAATCTTACTTTCAGTGCGATTTGTGTAATAGGAAGTTTAATTCCAAAAATATGATCGCTCGTCACATGGACTACCATGATAAGACGCCGCCACAAGTCTGTAAAATATGTGGTAAAGTATATCATTTTCAGTCGACGTATAACAAGCACATGAGGTTCAGTCACGCCTTATCTCCCAGGTCTAAGTACCGCTGTAAAGTGTGCGATCTGGCGTTCACATCGCTCAAGTACAAGTGGGACCACGAATGGGACAAACACAAAATAAGAAAATCTGTCGTCGATTGTAACATTTGTGGTTCTAAATTCAGGAAATTCACTGATCTGAAACGTCACAGCAATTGCGAGCATAACGTCGCTATACCTAATTCTAAAAACTATTTCTCTGACACTCACCAATATAGCTTTGAAGAGAAAATGGAACTCGATGAAGTTAGTGATTATTAA
Protein Sequence: MKSTLKYPVLFMPNNLIDNFKYKNESECLNLTINHENSLLYIGIANVKFVDPNTDLTTYLKEEFDLKSLNLHNLSTNKYPEYNYGQKVFNAVVESADPELYGFLDGTAPLSPLHPNETNIISDWQENTALVQLLSAPGDRETPKQRKTIIFSGSDATHGQTIQKINVIDPNVKCCNDNTNDSSGEVSLLSNSNTKKIHCDNCDRTFKDNPSYRDHKQRVLRNQSKSSLTESSQSDIKPDVLELTRECVTCKKIFKSKEKYFVHLKGHGNPDRECLVCHKVLSSKSSLKNHSKTHNRRHQCEFCTKSFNKKSALETHTSKMHKDYTCFVCCRICLNLADLRAHLTEHEAETNITDVNLESLLQEPPIANEIDEDFCLQQFIEVENEEIVETLKDASADNNLLLNDINNMSLEDILQNEATFTFDATNNPESEDSFTRALGEVSVPDCWDPLEGMSADDIFSSLGSVSAMDSTLPISQTNKSKMKQHSKSCNLCGKGFDRKSDLKRHTIEHIVRAVLMRNQVTEEGRLHLKCNLCDNAYNEIDKFKAHLRSHANLTIYECKFCDKSFSDSSNFSKHKKVHSKSYFQCDLCNRKFNSKNMIARHMDYHDKTPPQVCKICGKVYHFQSTYNKHMRFSHALSPRSKYRCKVCDLAFTSLKYKWDHEWDKHKIRKSVVDCNICGSKFRKFTDLKRHSNCEHNVAIPNSKNYFSDTHQYSFEEKMELDEVSDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -