Tbis001107.1
Basic Information
- Insect
- Tineola bisselliella
- Gene Symbol
- ZFY
- Assembly
- GCA_028551675.1
- Location
- JAPWLS010000072.1:1867-11466[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.21 11 6.7 3.0 1 23 247 270 247 270 0.96 2 11 0.0019 0.1 13.1 0.2 1 23 277 299 277 299 0.98 3 11 0.026 1.4 9.5 0.6 1 23 303 326 303 326 0.96 4 11 0.56 31 5.3 1.0 1 12 333 344 333 355 0.72 5 11 5.7e-05 0.0031 17.9 0.6 3 23 361 382 360 382 0.93 6 11 1e-05 0.00057 20.2 1.7 1 23 388 410 388 410 0.98 7 11 0.052 2.8 8.5 0.7 3 21 423 441 422 446 0.90 8 11 1.1e-05 0.00062 20.1 0.9 1 23 454 477 454 477 0.94 9 11 0.0028 0.15 12.5 0.8 1 23 482 505 482 505 0.97 10 11 2.3e-06 0.00013 22.2 2.5 3 23 514 534 513 534 0.98 11 11 2e-06 0.00011 22.4 1.3 1 23 540 563 540 563 0.95
Sequence Information
- Coding Sequence
- ATGAAAGAAAAAAGTTTACATGGAAATTCATTATGTTCTACCTGCTTATGTCCAGGGAGGGACCTACAGAATATTTCTGACATGGTCTCCAAACAATTCTATCTAAGTGTAATACAAGAATTACCTTTTCAAAGGAACACAGATTCTGAACCGCAGATATGTTGGGAATGCAATGCTTTATTGAAAAGAGTAATATTATTTAAGGAACAAATAAAAGACTGTTACAATATACTGCAAAGATATAACAATGAGAATATCTCCGATAGTCAACTCACAGATGTGTCACGTTCACCAAGACTCACAATCAAACATGTGTCGAGTGTTAATTTAGCACCAGAACAATGTGACGAAGATGATGTCTTGAGTACTGTGAAGCAAACAGTCAAGAATGAAGGTGTCAAGAAGGAATGGGAGATATGTTTAGTGAAATGTGAAGATAACAGTTCTGATGATTTCAAAGATGAAAACGAGTATTCTGATTATGACCTGTCTGACATTTCGGATATATCTGATATTTCGGTTAATTCGGATAACAGTCTGGAAGACATGGATGAAGTCATCGGGACTAGTAAGAATGGTAAATCAAGAGCGAAAAGTAAGAAAAGTTCGAATAAAAGGAAGGTAAAAAAGGAAAAAAGTAGTGCATTACAGAAGATAAAAACAATAGAACTGACATATGAGGAGATGCTGTTGGAGAGAGAGCGAGAGACAGTGAAGCATAATTACGTCAATGCAGAATTTAAATGCGAGTTGTGTCTTATGGGATTCAATTATGAAAAGTCATACAAGACTCACAATAAGAGGAAACACTCTCAGAATTTGGGAGATTACAATTGTCCAGTTTGCAAAACAGTGCTGGCTAATGTCGAATCGTTCACGGCTCACTACAAACGCCATTTGAGACGATATGAATGCTTGGAATGCGGCAAACGCACGATGGATCGTAAATTTATAATGCAACACTATGAAACAATTCACGAAGGCAAAGTGAAAGAATACAAATGCGACATATGCGGGAAGTTGTCCAATACTATAGATGCCCATCGTTACCACAAGGGGACGCACAAACAACGAGCCGCATGCGAAGAATGTAACAAAACGTTCAGTCATCGAGCAGGACTCATGAATCATAGACTGGCGGTGCATAAGAGGAATAAAGGATATCCGTGTACGCTTTGTGATAAAAAATTTAGATGGAAGGGCAGTCTAAGTAAACATATGAGGAAACATATTAAAAAGGATGACTCGTTGTCCGATCGTCCCGTGTGCGAGCCCTGTGGCATTACCTTCGCGAGTATATGCTCTTTGCAGCGTCATTTAAAGAACAGTTTGAAGCATGTCACTGAAGATGAATTGAAATACATATGCGACGATTGTAATAGAAAGTTCTCGGATAAAACTAAACTAAGGGATCATATTGAAGAGAAACATCTGCATAGAACGTACCAATGTCCTATTTGTCTCAAGCCGTCAAAAAATAGAGTGTGCCTAGATCAACACGTCAGGAACGTTCACAGGGGAAGGCCTAAAAACAAAATTTGTCATCATTGCGGTAAAGCATTCCCTACTCAAATGCAGCTGGATTCCCACATACGGACTCATACGGGTGAGAAGCCATTCATATGCGAATATTGTCCGACGACGTTCTCGCAGCAATCGAATTTGTACAAGCATAATAGACAGGTACACATGACTGTGAAAACTAAACGCTACTCAGTTTGTCGTAAGCGCAAGAACAAAACGGAACAACCTGTCGTACCGGAAGTACCAAATTACAATAGAGATGTACCCGCTTTATCATATGATCAAGTTAAACATGAATTCGTTCTATAA
- Protein Sequence
- MKEKSLHGNSLCSTCLCPGRDLQNISDMVSKQFYLSVIQELPFQRNTDSEPQICWECNALLKRVILFKEQIKDCYNILQRYNNENISDSQLTDVSRSPRLTIKHVSSVNLAPEQCDEDDVLSTVKQTVKNEGVKKEWEICLVKCEDNSSDDFKDENEYSDYDLSDISDISDISVNSDNSLEDMDEVIGTSKNGKSRAKSKKSSNKRKVKKEKSSALQKIKTIELTYEEMLLERERETVKHNYVNAEFKCELCLMGFNYEKSYKTHNKRKHSQNLGDYNCPVCKTVLANVESFTAHYKRHLRRYECLECGKRTMDRKFIMQHYETIHEGKVKEYKCDICGKLSNTIDAHRYHKGTHKQRAACEECNKTFSHRAGLMNHRLAVHKRNKGYPCTLCDKKFRWKGSLSKHMRKHIKKDDSLSDRPVCEPCGITFASICSLQRHLKNSLKHVTEDELKYICDDCNRKFSDKTKLRDHIEEKHLHRTYQCPICLKPSKNRVCLDQHVRNVHRGRPKNKICHHCGKAFPTQMQLDSHIRTHTGEKPFICEYCPTTFSQQSNLYKHNRQVHMTVKTKRYSVCRKRKNKTEQPVVPEVPNYNRDVPALSYDQVKHEFVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -