Basic Information

Gene Symbol
Znf711
Assembly
GCA_028551675.1
Location
JAPWLS010001080.1:15051-23149[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 3.4e-05 0.0019 18.6 3.8 1 23 294 316 294 316 0.99
2 11 0.025 1.4 9.5 0.5 1 23 323 345 323 345 0.98
3 11 0.017 0.93 10.1 0.5 1 23 349 372 349 372 0.96
4 11 4.7 2.6e+02 2.4 4.3 1 23 379 402 379 402 0.85
5 11 3.7e-07 2e-05 24.8 0.3 2 23 408 429 408 429 0.98
6 11 2.5e-06 0.00014 22.1 2.0 1 23 435 457 435 457 0.98
7 11 0.00075 0.041 14.3 1.4 1 22 463 484 463 488 0.93
8 11 0.028 1.5 9.4 6.6 1 23 496 518 496 519 0.95
9 11 0.00026 0.014 15.8 0.6 1 23 525 548 525 548 0.96
10 11 2.6e-06 0.00014 22.1 3.7 1 23 557 579 557 579 0.98
11 11 2.5e-05 0.0013 19.0 0.6 1 23 585 608 585 608 0.96

Sequence Information

Coding Sequence
ATGGAAGTGTTTGCTTCCGAGGAATCGAAACCGACTTTGTGTAAGAGCAGAGTGCTCTGTCGCTGCTGTTTGTCCACCGATAAGGTCGTGAAACACATAAAAGCATCGTCGTATATTTACACGGATATCAGCGGAATTAAGATTTCCGAGTCGGACAGCCTCCCTTGTTGGATCTGTATCGAATGCTTCTATCTCCTGGACAAATTGTATAAATTCAAAAGGAAAATCATCAAAGCCCATTCCGTTTTATATGAATACCTCAGCAGATGTGCACCTTTCCCAATTGACGCACAAGATCCTGAACTGAACAAATACTCATCACCTGTTTTGTGCTCGACTGAAACGTTGATATTTGAGAATAATATACAAACGACCGGCTATCACGATGTACTGCAGCACACGAAGCAACTGAATGTAACAAATTTAAATGTAAAAGTGTTATATCCGTCACAAAAATGGAGTAATATTAGTAAAGAGAAAAATGAGTATCCGTTGATTAAAGAAGAGACACAAGTGGGTAGTGATTTAGAAGATGATCTACCTTTAGAGGAAATAAGAAGTCAAATAGAAACAAGTTCATTGTTCGAGCAAGATTACAAAGATTTCTCTGTGGATGGCCAGCTTTTAGACAGTGTTAGTGAAACAAAAAGGAAAAGAAAGAGTAAAAAGAGAGACAGTGATGGTTCTGTCAAGAAGAAAAAGAAGAAGATTAAAAGCCCTAAGAAAGAAGAACCTATAAAAGAAGAGGAACAGAAGGCGCCGCTACGTAAATTGTTGGAATTGGATCCGAACAAAATACTAACGATTAAGATCTCGCACAAGGAGCAGCTGCAAATGAGAGAGGAGATGAGCCGCGACGAGACGTATCTCAAATTTACGTTTAAATGCACTCTCTGTTTCAAGGGGTTCAACCATGAGGACAAGTTGGCTAATCATATGAGAAAACATAGTCCTTCTCGTGGTGCGTTCGAATGTAAATTATGTCAGATGTATCTCCCAACAGTGTACTCTTTACAAGTACACAAGCTGACGCATAACACACGGTACCAATGTCTCAAATGTGATAAGAGGATGGTCAGCAAAAGCAGCATAGTGCAGCATTATTTAGTTGAACACGACGGTGTACTACCTCAATATAAATGCCAATTGTGTGGAAAAATTTCGCACAATGACAAGACGCACCGTGGCCATATGCGCAACCGTCACAGCGGCGTGCGGCCGAAGTGCGACCAATGCGGAAAGTCATTTGTTAACAAGGATTCGTTGATAGAGCACATGCTAATACACCAAGGCATTAAAAACTACGTGTGTGAGACGTGCGGTAAAAGGTTTCGCACGAAGACTCAAGTGAAGAACCATCAAATCAAACATCTGGACTCGAAGGACTTCTATTGTGTGGAATGTGATACCAGGTTCAAGTCGGAGCTCAATCTGCGAACTCATCTGCAGAAGTCGCTGAAGCATCGGGATAAGTCGACTCTGAAATTCCCGTGTCCCCGCTGCCCGCATCGCTTCCCCACGGACCGAGCTCTGCAGCACCACCTGTGTTACCACCACGAGGGACGTCGCGTGCATGTGTGCGTCACGTGCGGCCACTCGCTGGCCACCAGCAACAGCCTGGCGAAACACATCAGGGTCGCGCATTTGGGGTACCGGCCCCCGTTGAAACATGTCTGCCATACTTGCGGGAAGGCGTTTCGGAGTAAAAGCGTGTTGACGAATCATGCGCGCACGCACACCGGCGAGAAGCCCTTCGAGTGCGAGGAGTGCGGGAGGAAGTTCACGCAGCAGACCGCGAGGAACACGCACATCAAGTTGGTGCATCTGAAGCTGAAGAGAACTGCCAAGACTAAACCGCGTGAGACTGCGCCAGAGCAATCCGTGATAACAAAGCAAGAGGCTGTTTATGACAACTGGAACCCACCCTTGGACAATGTGTACTTTCCCGTCGGGAACCCACCATAG
Protein Sequence
MEVFASEESKPTLCKSRVLCRCCLSTDKVVKHIKASSYIYTDISGIKISESDSLPCWICIECFYLLDKLYKFKRKIIKAHSVLYEYLSRCAPFPIDAQDPELNKYSSPVLCSTETLIFENNIQTTGYHDVLQHTKQLNVTNLNVKVLYPSQKWSNISKEKNEYPLIKEETQVGSDLEDDLPLEEIRSQIETSSLFEQDYKDFSVDGQLLDSVSETKRKRKSKKRDSDGSVKKKKKKIKSPKKEEPIKEEEQKAPLRKLLELDPNKILTIKISHKEQLQMREEMSRDETYLKFTFKCTLCFKGFNHEDKLANHMRKHSPSRGAFECKLCQMYLPTVYSLQVHKLTHNTRYQCLKCDKRMVSKSSIVQHYLVEHDGVLPQYKCQLCGKISHNDKTHRGHMRNRHSGVRPKCDQCGKSFVNKDSLIEHMLIHQGIKNYVCETCGKRFRTKTQVKNHQIKHLDSKDFYCVECDTRFKSELNLRTHLQKSLKHRDKSTLKFPCPRCPHRFPTDRALQHHLCYHHEGRRVHVCVTCGHSLATSNSLAKHIRVAHLGYRPPLKHVCHTCGKAFRSKSVLTNHARTHTGEKPFECEECGRKFTQQTARNTHIKLVHLKLKRTAKTKPRETAPEQSVITKQEAVYDNWNPPLDNVYFPVGNPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01451724;
90% Identity
-
80% Identity
-