Basic Information

Insect: Tineola bisselliella
Gene Symbol: -
Assembly: GCA_028551675.1
Location: JAPWLS010002028.1:7429-12935[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 5.8 3.2e+02 2.1 0.6 1 19 141 159 141 160 0.78

2 13 0.037 2 9.0 0.2 2 20 177 195 177 199 0.90

3 13 0.99 54 4.5 1.9 2 23 239 260 238 260 0.95

4 13 2.7 1.5e+02 3.1 0.4 3 23 322 343 322 343 0.96

5 13 0.49 26 5.5 3.9 1 20 348 367 348 369 0.94

6 13 0.00016 0.0088 16.4 0.3 3 23 379 399 377 400 0.94

7 13 0.0046 0.25 11.9 2.7 1 23 421 443 421 443 0.95

8 13 0.00014 0.0078 16.6 2.7 1 23 450 472 450 472 0.97

9 13 3.8e-07 2.1e-05 24.7 0.4 3 23 483 503 482 503 0.98

10 13 7.9e-05 0.0043 17.4 5.1 1 23 509 531 509 531 0.99

11 13 1.4e-07 7.4e-06 26.1 1.5 2 23 538 559 537 559 0.96

12 13 5.3e-06 0.00029 21.1 4.7 1 23 565 587 565 587 0.99

13 13 3.7e-05 0.002 18.4 0.1 1 23 593 615 593 615 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	5.8	3.2e+02	2.1	0.6	1	19	141	159	141	160	0.78
2	13	0.037	2	9.0	0.2	2	20	177	195	177	199	0.90
3	13	0.99	54	4.5	1.9	2	23	239	260	238	260	0.95
4	13	2.7	1.5e+02	3.1	0.4	3	23	322	343	322	343	0.96
5	13	0.49	26	5.5	3.9	1	20	348	367	348	369	0.94
6	13	0.00016	0.0088	16.4	0.3	3	23	379	399	377	400	0.94
7	13	0.0046	0.25	11.9	2.7	1	23	421	443	421	443	0.95
8	13	0.00014	0.0078	16.6	2.7	1	23	450	472	450	472	0.97
9	13	3.8e-07	2.1e-05	24.7	0.4	3	23	483	503	482	503	0.98
10	13	7.9e-05	0.0043	17.4	5.1	1	23	509	531	509	531	0.99
11	13	1.4e-07	7.4e-06	26.1	1.5	2	23	538	559	537	559	0.96
12	13	5.3e-06	0.00029	21.1	4.7	1	23	565	587	565	587	0.99
13	13	3.7e-05	0.002	18.4	0.1	1	23	593	615	593	615	0.98

Sequence Information

Coding Sequence: ATGGAATTTAATTATTATAAAACGTGCCGAACATGCCTTGGAAAAGATGTTCCTGGGACTTCAATTACTTTTGAGAAGAAAGTGAATTTCGTGTACCTTCAGAATTTAATTCAAGAAGTTACAACTATAAAGTTGAGCAAAAATGATGGTCTCTCTTATGACGTTTGCGACGCTTGTGTTGGTAAGGCTGAAGCGGCTCAGGCATTTAAACAGAGAGCCATTAAGTGTTCAGCTAGTGTCCAAAGTATTGGTACTCCGCCGCCGGAAGGTCAAAATGATGCCATTATAGAGATCTTGGATAGTGATGATTCTCCAAAAGTAACCTTAGATGACTCCTGGGATATTGGCGATGTAATCAGGGAAACTGATAATCTGACTTTCAGTCAACCACATGAACTAAATTCACAATCAGAAGCAAGTTTCAAATGTAATTCTTGTCATACACTTTTTGAAAGTGAGAAAATTCTCGAATTGCACCGCTGGCAATGCATTAATGATCAATTAAGTGAAAAGGATTTTCAAAAAGCCTACTGCCCGCTCTGCCTCGTGTCATTTGATGATGACACACAGCTTACTAAACATATGTGGACCACACACCGAGAAGTAATGGGCGATAAAAAGCGTGGTAGACCTAAAAAACTTGATTCTATGGAAGTACGTCGAAGATTAACTCAATATGGTTATGATTTAGAGAGTGTTAGTAATCCGGAAATTAAATGTTCTTTATGTCATGAGATGTTACCTACACAACTAGAGTACTCACATCATTGGAGTAATCATTTAGAGCAAGAGGTGTATGGTTGTTTTAATTGCAAGAATGTGTATTTAAAGTCAGGGTCATACAATTGTTGTCCCAAAAATGTTTCGTCGTTTACTGTTATTAATGATGATATGAAATGTGTGATGAATGCGACAATCCTGAGATCTATTTTGTACGAATGGAGTGGCCCACGTCTTCACGGATGCTTTGTCTGTTCAGCAATATTCTCAGCAGTTGATAAACTGTTGGTACATCATGAAACTCAGCATCCTGATTTATCTCATCGTTGCAATTTGTGTTGTAAGGAGTTTTCTACTTTGAAGAATGCAAGACGTCATCGGGAAAATTGTAAGTCTATGGAGCGTAAGTTAGCATGTCCGGTGTGCGGACTCAAATTTGCATTTGAAATATCCTTGAATAAACATATACTGCGCCATCATAACGGGCAAAAAGTATCGGTTCAGTTCCTGGATCTCGCAGTAAGACGTAAAAACAGCAAATTTTTATGTCACCTCTGCAGCAGATTGTTCTCCAGACAGGATCTATTGGACAAACATTCTAAAGTGCATTTGCCGGAACCTGATCAATACAATTGTCACGTCTGCAGACACAAATTTTCAACTGCTGGAGCTTTGCGTGAACACATTAAGGAACACGATCCAGAGGCATCAGAGCGCAACAATCTTTGTGTTTATTGTGGCCGTAATTTCTCAAATTCGTCTAATTTGATAGTACATATACGCAGACACACTGGAAACAACCCGTACAAGTGTGACTTTTGCTCAAAAAGTTTCCCTCGCTCGTCAGATTTGCAATGCCATCGTCGCACACACACCGGAGAAAGACCGTGCGTCTGCACTGTCTGCGGGAAAGCATTTTCCCGCAGCAATAAATTGGCCCGTCATATGCGTGTGCACACTGGCCAAAAGCCTTACAAGTGTTTGCATTGCGAAAAGTCGTTCTCACAAAGTAATGACCTGAAACTTCACACTCGTCGCCACACTGGAGAAAAACCATACATTTGCGAGGTTTGCGGAGAACGATATATTCAGGGCACAGCATTGCAGCAGCACCAACGTACTCACGGCCATTTTAAGTGCGTCAATACTGCACCAAAACCTAGTACGTCTTCTACTAGTGCTTATGAACCAAATAAACCTGTGAAACTACCCTTCAGCCAGGTATCTGCTTCATTATCATCTGGGCCTAGACAGATTGCCAGCTCGACTTGCGTTATTAACCCTACAGAAAATATGGCTCAAGAGTGCCAAGATATTGCCGTTTCTTCAACTGCCGAAGAAACGACATTACAGCAGCACCAAAGTACTCACAGTCCATCCAATTGCACCAATACGCCACCTATTACTTTAGAAAATGCGGCCCAAGAATGTGAAGATACTTTTTTAAAGAATGTTTCATCATTGCAAACTGAGACAGTCGTGGGCAACATAAGTTTAGAGTTCTAA
Protein Sequence: MEFNYYKTCRTCLGKDVPGTSITFEKKVNFVYLQNLIQEVTTIKLSKNDGLSYDVCDACVGKAEAAQAFKQRAIKCSASVQSIGTPPPEGQNDAIIEILDSDDSPKVTLDDSWDIGDVIRETDNLTFSQPHELNSQSEASFKCNSCHTLFESEKILELHRWQCINDQLSEKDFQKAYCPLCLVSFDDDTQLTKHMWTTHREVMGDKKRGRPKKLDSMEVRRRLTQYGYDLESVSNPEIKCSLCHEMLPTQLEYSHHWSNHLEQEVYGCFNCKNVYLKSGSYNCCPKNVSSFTVINDDMKCVMNATILRSILYEWSGPRLHGCFVCSAIFSAVDKLLVHHETQHPDLSHRCNLCCKEFSTLKNARRHRENCKSMERKLACPVCGLKFAFEISLNKHILRHHNGQKVSVQFLDLAVRRKNSKFLCHLCSRLFSRQDLLDKHSKVHLPEPDQYNCHVCRHKFSTAGALREHIKEHDPEASERNNLCVYCGRNFSNSSNLIVHIRRHTGNNPYKCDFCSKSFPRSSDLQCHRRTHTGERPCVCTVCGKAFSRSNKLARHMRVHTGQKPYKCLHCEKSFSQSNDLKLHTRRHTGEKPYICEVCGERYIQGTALQQHQRTHGHFKCVNTAPKPSTSSTSAYEPNKPVKLPFSQVSASLSSGPRQIASSTCVINPTENMAQECQDIAVSSTAEETTLQQHQSTHSPSNCTNTPPITLENAAQECEDTFLKNVSSLQTETVVGNISLEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -