Tbis012418.1
Basic Information
- Insect
- Tineola bisselliella
- Gene Symbol
- ZNF653
- Assembly
- GCA_028551675.1
- Location
- JAPWLS010000802.1:149300-151488[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 2.8 1.5e+02 3.1 0.3 5 23 303 321 302 321 0.94 2 12 0.02 1.1 9.9 0.2 3 23 327 347 325 347 0.94 3 12 0.34 18 6.0 1.6 2 23 355 376 354 376 0.93 4 12 1.1e-08 6e-07 29.5 0.7 2 23 382 403 381 403 0.97 5 12 0.0025 0.13 12.7 4.3 1 23 409 431 409 431 0.98 6 12 6e-05 0.0033 17.8 0.2 1 21 435 455 435 456 0.95 7 12 0.00033 0.018 15.5 0.2 1 23 487 510 487 510 0.95 8 12 0.051 2.8 8.6 0.2 3 23 519 539 517 539 0.95 9 12 0.00056 0.031 14.7 0.3 1 23 550 572 550 572 0.97 10 12 8.7e-05 0.0047 17.3 4.7 1 23 578 600 578 600 0.98 11 12 0.0024 0.13 12.7 0.3 3 23 608 628 606 628 0.98 12 12 0.00017 0.0092 16.4 0.8 1 23 634 657 634 657 0.97
Sequence Information
- Coding Sequence
- ATGGAGGTGTTTTTAAAAGTGTGTCGGTGCTGCTTATCACCTAAAGCTGAGGTCTCATTGTTTGACAAGAAACTTCTTGTAAATTTAAAGTTTTTTGAAACTACAAGTATAGAGGTCAGAAATGACGACGGGTTACCCCAGAAGCTATGTAACAATTGTTTTTCGCTGCTCAATTCTGCCTACCATTTCCGTACACAATGTATCAAGATGGACAATGAGCTCCGGTCGCATCTCAAAGCGCTGGACGAATCAAAAGCAGCGGAAGAAAGCAACAAACCTAAACCTAAATTACCCATTAAGGCTGAGTCATCACCAATGAAGCAATTGGAAGATATGATAAAGTCTGAACCCGACAGTGATGATGACTGCTACTACGTGGTTGTCATTGATGAAGAAAATAATGACAATATTGCAGTTAAACAGGAACCAATGTCTTCGGCACAAGAAATGTTTGAAAATTCTGTAGAGTCCTACCTTTCTAGCCAAAAAGTGCCTGATAGTGTGCCGGATACTATTTTAGAAAATGAAGAAATGGAGGACGGAGGCGAAAGAATGATTGAGGACTCTCAACTGGAAACCGAGTTAATAACAGCTGCGGAAGACACGGATGACATAAACGAAAGGAATATGGCTGTGGCCAAGTTAGGCGATGTTCACGAAAATAACTTATATAAATTTCTAAGTTCAAAAGATAAGGATGGAAATATCATTTTAAGGTCTTCCGATAACATAACTTATTTCCCAAACAGCGTAGAAGAGGATTCGTCCCAAGAAGAAGTCATAGTGTATGAAGAGGGAGAGAACTCACCATTCCAGATTTTAACTTGCGATGGGGAATTGGTCATTGAATATGCTGATGAGAGCCAAATTGTACTCAAACAGGAGAATGCTTCTCCGTTGTTATGTGGCTGTGGAGTCCAATGTGACAGCATTGAAGCTTATGAGAAGCATCAAACGACACACGCGGATTCACATCTCTGCGGCCTCTGTGGCAAAGGGTTTGAATCCTCGGAAATATTGACCGGCCACATGTTGCTGCACAAGGTGCGAGGCAACTTCATAATGTGTCCCTTTTGCAACCAGCACATAAAGCGCAGCACACTCACGCAGCACATCAAGTACGTTCATTACAATATTAAAACCAAATGCAAAGTTTGCGGCAAATCGTTTGCTAATCCCAACAACTTGAAACGCCATATGATGATTCACAGCGGCATACGACTCTTTGAATGTGACATTTGCTTCAAGCGGTTCCATCAGAAAATAACAATGCAAACACACAGGTTAACGCACATGGAACCGTATCAGTGCGCACAGTGTGATAAGGTATTTGAAAATAAGCCTGATTTGGAAACCCACAAGAATAAATGTCCAAAAACTAAACTCATGAAAATGCGTGAAAGTTTGTTAAAGTCTGTGAAACAAGAAATTAAAAATGTTGACGGCGAAGTATTGGGCTATGCTTGCAATTTATGCAAGAAAATGTTTTCATTGGAGACTGCATTGCAGACTCATATTGAAAATGTGCATATGAAAAATGAGCTGCAACTGTTTTGCAGTGAATGCGGGGAGGTGAAGTCGTCAGAGAAGGAGTTGGCGTCGCACATGACCCAGCATAAAGCTGCGAAGACAAAgagtgagaagcggtttgattgtggcatttgtggcaagacctgtccgagtcgggcgatgatgatcatgcacgagcgggttcacacggatgagaggccctttgagtgtcaactgtgcacggccaaattcaaaacaaagacgcatcttcgtacgcatcagctgacgcacacaagggagaagaagtttggctgctcagtctgcatgaagttctttgcattgaagggcaatttggttgttcatttgcggactcacactggtgagcgaccgtacgtttgcaatttgtgcggtgacgcgtttaTTGATTCGAAATATTTGAAGAAGCACAAGAAGAAGGAGCATGCTATCAATGATTTGCCTTGGAATAAATATTAA
- Protein Sequence
- MEVFLKVCRCCLSPKAEVSLFDKKLLVNLKFFETTSIEVRNDDGLPQKLCNNCFSLLNSAYHFRTQCIKMDNELRSHLKALDESKAAEESNKPKPKLPIKAESSPMKQLEDMIKSEPDSDDDCYYVVVIDEENNDNIAVKQEPMSSAQEMFENSVESYLSSQKVPDSVPDTILENEEMEDGGERMIEDSQLETELITAAEDTDDINERNMAVAKLGDVHENNLYKFLSSKDKDGNIILRSSDNITYFPNSVEEDSSQEEVIVYEEGENSPFQILTCDGELVIEYADESQIVLKQENASPLLCGCGVQCDSIEAYEKHQTTHADSHLCGLCGKGFESSEILTGHMLLHKVRGNFIMCPFCNQHIKRSTLTQHIKYVHYNIKTKCKVCGKSFANPNNLKRHMMIHSGIRLFECDICFKRFHQKITMQTHRLTHMEPYQCAQCDKVFENKPDLETHKNKCPKTKLMKMRESLLKSVKQEIKNVDGEVLGYACNLCKKMFSLETALQTHIENVHMKNELQLFCSECGEVKSSEKELASHMTQHKAAKTKSEKRFDCGICGKTCPSRAMMIMHERVHTDERPFECQLCTAKFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCNLCGDAFIDSKYLKKHKKKEHAINDLPWNKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -