Basic Information

Insect: Tineola bisselliella
Gene Symbol: -
Assembly: GCA_028551675.1
Location: JAPWLS010001253.1:386263-388866[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0028 0.15 12.5 0.1 2 23 88 110 87 110 0.95

2 16 7.8e-05 0.0042 17.4 0.4 2 23 116 138 115 138 0.94

3 16 0.00077 0.042 14.3 3.3 2 23 142 164 141 164 0.96

4 16 6.5e-06 0.00035 20.8 0.3 1 23 170 193 170 193 0.94

5 16 0.0026 0.14 12.6 0.5 2 23 201 223 200 223 0.96

6 16 0.004 0.22 12.0 0.5 1 23 228 250 228 250 0.99

7 16 2.2e-08 1.2e-06 28.6 0.6 1 23 256 278 256 278 0.98

8 16 0.24 13 6.4 0.2 2 20 285 303 284 305 0.90

9 16 0.1 5.7 7.6 0.6 1 23 371 393 371 393 0.96

10 16 0.014 0.77 10.3 0.3 2 23 464 486 463 486 0.96

11 16 0.00015 0.008 16.6 0.9 3 23 494 515 493 515 0.98

12 16 0.043 2.4 8.8 2.2 2 23 521 543 520 543 0.95

13 16 0.078 4.2 8.0 4.7 1 23 547 570 547 570 0.96

14 16 0.00026 0.014 15.8 1.4 2 23 577 599 576 599 0.95

15 16 0.022 1.2 9.7 2.0 1 23 605 627 605 627 0.94

16 16 0.0008 0.044 14.3 0.8 1 23 633 656 633 656 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0028	0.15	12.5	0.1	2	23	88	110	87	110	0.95
2	16	7.8e-05	0.0042	17.4	0.4	2	23	116	138	115	138	0.94
3	16	0.00077	0.042	14.3	3.3	2	23	142	164	141	164	0.96
4	16	6.5e-06	0.00035	20.8	0.3	1	23	170	193	170	193	0.94
5	16	0.0026	0.14	12.6	0.5	2	23	201	223	200	223	0.96
6	16	0.004	0.22	12.0	0.5	1	23	228	250	228	250	0.99
7	16	2.2e-08	1.2e-06	28.6	0.6	1	23	256	278	256	278	0.98
8	16	0.24	13	6.4	0.2	2	20	285	303	284	305	0.90
9	16	0.1	5.7	7.6	0.6	1	23	371	393	371	393	0.96
10	16	0.014	0.77	10.3	0.3	2	23	464	486	463	486	0.96
11	16	0.00015	0.008	16.6	0.9	3	23	494	515	493	515	0.98
12	16	0.043	2.4	8.8	2.2	2	23	521	543	520	543	0.95
13	16	0.078	4.2	8.0	4.7	1	23	547	570	547	570	0.96
14	16	0.00026	0.014	15.8	1.4	2	23	577	599	576	599	0.95
15	16	0.022	1.2	9.7	2.0	1	23	605	627	605	627	0.94
16	16	0.0008	0.044	14.3	0.8	1	23	633	656	633	656	0.85

Sequence Information

Coding Sequence: ATGACTGATCCGGAAACTTTAAAATCCCATGTTTTAGAAACGCATTTGTCCGTCGATTTAGTCGCTTTCGTGAGTGAGAAGGTTAAGACTAGATTTTTGCCCATAAAACTTGATATTAGTGATATAGCTTGCAATGTCTGTGAAATACCAATGGATAGTCTCGATGGGCTGATCGGTCATATAGTTGCGGTTCACGATGAGGTATATGATGATTCGTACCATAGCGTCTTTCCGTTTATCTTGACCAGTGCCAGTATCAAGCCTTGCGCGATTTGTGAAGCAGTTTTCGATAATTTCTCCTCTCTAGTCACGCATATGTACAAAACGCATGTTGATAATTCGCTCATGTGTCAGATTTGCGGTCGCAGGTTCATGGATAGTGTGCGTCTGATGCGTCACATGAAGGCGTCGCATTTGGATTGTGTATGCAAGATTTGCAACAAGACACTCAGCACGTATACTAAACTGGTGCGTCATAAGCAAACGGTGCATGGTACTTTGAAAACGTACACTTGTGATGTTTGTGAAGTGTCATTCAAGAATAAATATCAGTTGACAGTGCATATGGGGAATGTGCATAATGTAGCTAAGTATAGGATAAAGTGCGAATTCTGTCCAAAGATTTGTACAACGAAAGGTGCTATGGTCCTCCATGTCAGGTCTGTTCACAGTGAGCCGGAATATGAGTGCGATGTCTGCGATTATAAGACAGCGATTAAATGGATGCTAAAGTTGCATAAAAGGAGGCATGTGGGTGTAAAGGATTACGCGTGTAGTGTTTGTAAGAAAAGTTTCGGTAGGTCGAGCAATCTGCGGGCGCATATGAGAGTGCATACGGGCTGTGTTGGCAAGGTCTGCAGATGGTGTAGGAAGGGGTTTACTGATTCGAACGCTTTTGATGAGCATGAAAAGGGGGGGTTACAACCCGAAGGTGGCCAGAGGAATGTAAAAATTAACGACAAAGTCGATGTAGAGTCCGAAGACGTTATTAAATCAAAGGAAAAGGGGCGATCGTTGAAGTCGCATGAGAAACGCTCTGTGATGAAGAAGAATGTGACAGAAGTGCTGCTGAACTCGAACGTGATGCCATTCCGTTGGCTAAAGAGCAGCTACAGATGCTTCTACTGCTACGACATTTTCGAAGAACCACAGGACCTGAAAAGCCACCAAACTGCTCACGAAGATGACGAAACCAAACGCAAAACAATGAACAATTATTGGGAGACTACGGTTTATATTGATGTTACTAATTTAGCTTGTAAACTGTGCTCTCAACCACAAACAGATGTTTATAATCTGGTCGATCATTTAGTTGAAAAGCATAAAGTAGCTTACGATAAAGATGTAGGTATGAGCGTGACAGAGTTTAAATTGAATAATATGTCAGTGAAATGTTTAGTTTGTAACGCGACTTTTCGCACTTTCGGCCCTCTGCTAACCCATACGAACAAGGACCACAAAGGCAGTTCGCCTATTTTATGCGAAATTTGCGGGCAAAATTTTAAGGACGTCCATTTGTTAAGGACTCACGTGAAGACGATTCACGAGATGGTCGTGTCCGTGTGCTCGGAGTGCGGCGAACGTTTTGAGTGTAGATCGAAGCTGTTGACGCATGAGAGGAATTTTCATGGTAAAAAACATAAGTGCTTGGTTTGTTCCGAGACGTTCAGGTCGCACTATAAGCGTTCGCAGCACATGGCTTCCGAGCATAAAAACAGACCTGAAATTAAATGTTTGCATTGTCCAAAGACCTTTGTCTTTAGGAGTATGATGATGAACCATCTGAGAGATgcccatttgaaagaaaggaatcacgtgtgtactgtatgcggttggaaagccttcaacacttacaggctgactaatcatatgtacaagcatagtggggagaagaatttcaaatgtgagatttgtgataaagccttcaccactaagaaaattatgagagcgcattttgtgaggatgcaCGTCAATGGACGGCCGAGTGTCGATTTTAGTGATTTGGCCGCTATGGCTGAGAATTGTTAG
Protein Sequence: MTDPETLKSHVLETHLSVDLVAFVSEKVKTRFLPIKLDISDIACNVCEIPMDSLDGLIGHIVAVHDEVYDDSYHSVFPFILTSASIKPCAICEAVFDNFSSLVTHMYKTHVDNSLMCQICGRRFMDSVRLMRHMKASHLDCVCKICNKTLSTYTKLVRHKQTVHGTLKTYTCDVCEVSFKNKYQLTVHMGNVHNVAKYRIKCEFCPKICTTKGAMVLHVRSVHSEPEYECDVCDYKTAIKWMLKLHKRRHVGVKDYACSVCKKSFGRSSNLRAHMRVHTGCVGKVCRWCRKGFTDSNAFDEHEKGGLQPEGGQRNVKINDKVDVESEDVIKSKEKGRSLKSHEKRSVMKKNVTEVLLNSNVMPFRWLKSSYRCFYCYDIFEEPQDLKSHQTAHEDDETKRKTMNNYWETTVYIDVTNLACKLCSQPQTDVYNLVDHLVEKHKVAYDKDVGMSVTEFKLNNMSVKCLVCNATFRTFGPLLTHTNKDHKGSSPILCEICGQNFKDVHLLRTHVKTIHEMVVSVCSECGERFECRSKLLTHERNFHGKKHKCLVCSETFRSHYKRSQHMASEHKNRPEIKCLHCPKTFVFRSMMMNHLRDAHLKERNHVCTVCGWKAFNTYRLTNHMYKHSGEKNFKCEICDKAFTTKKIMRAHFVRMHVNGRPSVDFSDLAAMAENC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -