Basic Information

Gene Symbol
-
Assembly
GCA_028551675.1
Location
JAPWLS010000075.1:56679-58658[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 4.5 3.8e+03 -1.9 0.3 33 45 53 65 48 66 0.82
2 5 8.9e-08 7.5e-05 22.7 0.1 4 38 224 260 221 261 0.95
3 5 1.6e-09 1.4e-06 28.3 0.1 2 45 274 321 273 322 0.96
4 5 6.5e-09 5.5e-06 26.4 0.0 1 42 325 365 325 367 0.96
5 5 4.7 3.9e+03 -2.0 0.1 3 15 375 387 374 391 0.85

Sequence Information

Coding Sequence
ATGGAGGGAATGGAAAATAACACTGTATATTGTCGAAAATTGGGTATAGTTGACAAATTAGTCAGTCATTATGATGAAATTTCACGTATAACAACAGCTATCGCTTATAATGACTTGGTAGATGAGCGGCTTTTTAGACTTGAATCTTTATTGAAACGCCGACTTCGGGAATGTAGGCAAAAACTTAAAAATTATCAAATTACTGACATCAGGCCTTACGACGTTACAGCTAAAAGAAAACGATTTAAGTATACGCAATGTGGTATACCATATTTTAAGGACTGTAATGGATGGAGAGCACCTAATAGCGATGAGGCACATATTATTGAAGGTCAAGACATGATACAATTCTACGAGTCAATTCCCAATCCTTGGACCGTCAGAGACAAAAGACAGTTTCTTTATGTTATTTGTATATTCTCATACAAATTAAAGTATAGATTATTGGAAGAGAAGATAAGGAAAAATGAAAAGGAAGGTTTGGGCACTGTAAAATTGAAGAAGCGTTGTGAACAATTAAAAACGAGATCGCTTGCTGAGTTAAGTTTGCCTATTGATGAAGAATATGACTGGTATGAGATTGCAGATATCCTAGACTACAGACATAAGCCACAGGAATATTCTGCACTATGGAAATTAGAACTGCATCCAAGCATAAATAATAAGATGTGGCAAATTGATGAACTTGCAACATTAAAGTCGCTGATTTTGCATTACAAAAATGAAAATTGGGATGTAATTGCAAAAAAATTAAACACCGGTAGAACAGCATATCAGTGTTTTATGTATTCATGCCAATCGGATAATAAAGCTGCTTCTAAAGCTTGGTCTGATGAAGAAGATATATTCTTGAGTAGGCTTGTGGATGCTTTCAGAGTTGATGATTACATACCCTGGACAAAAGTTGCCAATTCAATGGAAAATAGAACTGAAGGTGAATTAATTACGAGATGGCAGACACATCACCTGATGAAAGGAAGATTCTTGCCTGAAGAAGATCATGTTCTTCTTCTTTGTGTTAAAAAATTTGGTGAAAACTTTAATAAAATTACAAGATATCTTAAAAGATCTCCAGAACAATTACTTAGACGGTACAAAATTTTACAATCAAAACACTACACTTCATGGGATATCTCCGAAGATATAAAATTAATGGAATTAACAAAAAATTCAACCTCAATTAATTATTGTAATCTTATGAACTACTTCCAAGGAAAGCATAGTACCCAAATTCGTGCGCGACATTTGACATTACTTAAATGGCGTACGCTTAACCCAGGTGCCTCCTTGATTACAGCACCTCGCAGAATACAAAATTATACTGTTGTTGATAATTCATCTAACTGTTTAGCAACAGCTTTAGAGAATCTCCATGAGAAATTAGAATTCAGATTTGAAGAAACAGTCAAATCAGCCTTCACTGAAAATGACACTGAAATCATGAAGTTTCTTCAGGAAGAGAATTTTAAAAGTAACATTGATGATAAACTCATCCGTCAAACTAATGGGGAGAATATGAATTTGCAACTTTTTCAATTGTTACTGCGAGTTGTACTTGATAAAGAATTGATCAATTTCAGCTGTTATAGTCAAGAATATAAAAATTTGTTGGGCAATATTGTCGTTAATAAAAAAATACGCTCATACTCCAAGAAGTCTGTTTCAGCTAATAAAGTTCCAGCTTCAGTTGAATTACCTATGCCAGACTTATGGGGGAATAAATTTCAGGGATCTCCAAAATTTATATTTCCCCCAAATATTAACACATTAATTGCCTGTAAAAAAATATTATCAACCTATCATAAATGCAAATTACATCGAAATAAACCTATAAAGGCAATGTGTTCTCAAAATATGTTTTTTAATGAACAATGGTCTATCTTTTTAAGTAGATTCAAAATTATATTCCTATGGCCGTTTAGACTTAGTCTTACATCTGATTTTATTCGTAGATATAAAGATGCAGCTACATCAGATTAA
Protein Sequence
MEGMENNTVYCRKLGIVDKLVSHYDEISRITTAIAYNDLVDERLFRLESLLKRRLRECRQKLKNYQITDIRPYDVTAKRKRFKYTQCGIPYFKDCNGWRAPNSDEAHIIEGQDMIQFYESIPNPWTVRDKRQFLYVICIFSYKLKYRLLEEKIRKNEKEGLGTVKLKKRCEQLKTRSLAELSLPIDEEYDWYEIADILDYRHKPQEYSALWKLELHPSINNKMWQIDELATLKSLILHYKNENWDVIAKKLNTGRTAYQCFMYSCQSDNKAASKAWSDEEDIFLSRLVDAFRVDDYIPWTKVANSMENRTEGELITRWQTHHLMKGRFLPEEDHVLLLCVKKFGENFNKITRYLKRSPEQLLRRYKILQSKHYTSWDISEDIKLMELTKNSTSINYCNLMNYFQGKHSTQIRARHLTLLKWRTLNPGASLITAPRRIQNYTVVDNSSNCLATALENLHEKLEFRFEETVKSAFTENDTEIMKFLQEENFKSNIDDKLIRQTNGENMNLQLFQLLLRVVLDKELINFSCYSQEYKNLLGNIVVNKKIRSYSKKSVSANKVPASVELPMPDLWGNKFQGSPKFIFPPNINTLIACKKILSTYHKCKLHRNKPIKAMCSQNMFFNEQWSIFLSRFKIIFLWPFRLSLTSDFIRRYKDAATSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-