Tbis006450.1
Basic Information
- Insect
- Tineola bisselliella
- Gene Symbol
- -
- Assembly
- GCA_028551675.1
- Location
- JAPWLS010000071.1:8463-20110[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-07 0.00091 18.9 0.0 2 30 325 353 324 368 0.86 2 2 0.00013 0.12 12.0 0.0 14 38 396 420 392 423 0.84
Sequence Information
- Coding Sequence
- ATGTCCTACAAAATATGTTGTGTTCCCGGCTGTAACGTCCGATCTGgtgaagGCATTCAAATGCACACATTCCCCAATCCAGAGAAGGATTACAGACGTTTCACGAAATGGGTGGAGGCAATCAGGGGAGAAGTGCTCAAAATGGACAGCATGAGCGTTTATAAAAGAAGGCGGGTCTGCCGTAGACATTTCTCTGAGAGATTTCACTATGAGAGCAAGATTGTGAAGTATTCAGTGCCCGAGCTTCATCTAAGTCAAAAAGATTCTGAAGAGGATGCAGTCATTGCTGATAAACCTTCGGCAGGTGAAGATCCCGATGAATTTGATGAACCTATGATTGAAGAACGACTCGATGAAGAGTCGATAGCTTTTGATGAACCTGTAATGGAATCGGATCATGAGGTGAGTTATTTGCAGGTGTGCAGGTGTTGCCTCGGTGAAAATGAACTCGAGAACCTGTGGGATGTCCACACTTATGGGAATCATCGGGAAGTGTATGGGAGAATACTGAAATACTGTTTCGGGATTGAGTTGGTGCAAATGAAAAATGATAGAATATGCAAGGAATGCATTAGGAGTCTTCACGAGGCTAACGCTTTTAAGAACGTCGTTCTGAACGTCCAAGAGCAGTTGACGGGGGTTAATCTTAGAGATGCAAAGAAAAACAAAAGTACTGTCATCGAATTTATAAACAGATTTCAAGATGAATTGGAGGCTTTGGAGAACGCAGAGAAGGCGAATATAGAACGCAATATGGAGGAAGAGAATTATCCGACTGAGTATTTGGAATCTGATCTGGAGCTCGGTGGTGAGGAGGTTGTTCAAGAATTGAGACCTGTGGAGAAGAGTCGTGAGAAGAGTACTTTACCAAGTTCACAGCCAAGACCGAAAATCAGGCCTAAGGCAGTACAGCCAAGGAGTAAATCAAATTTTAAGATAGTCAAAGTCGTCAAGCGAAGAGTGTTGCCGAGCCGAGAGACTTTGATTCGAGCAGTACGAGCCGTTAAGGAAGGCAAGATGACACTAAGTGCTGCGAAGAAACTGTACGATATCAACGGATATTGTCTGAGGAAAATAATTGAAAGTGATATTGATTTGGAAAATATTGATTTGTCTTTGTTGACGGCTAGAAAAGATAAAATAGATTCTGTCGAGATGCTGAAGATGTCCACGGATTTTGTGAAACAAGGCAAATTAACAAAAGTGGAAGCTGCCTCATTGTTTAACATACCACTGAGCACACTCGATTATAGGATATCTAAGGGGTTCCTTGAAGACAGATCGGATCAATTGATAGACACTGAAAGAATTGATAGGAATGGTGTTACGATTGTCGAGGTTGATGATAAAGTATCCAGGGACCCTGATAGATTCACGCGCGCAGACCGCCTCCGTCTGGAACAGGATGTGAAAATGATCCTGGCATGCACGAACGCGACGCCCTATCTGGTTCTGCGCGAGAAGTTCGTCTGCGGCTACTGCAACGACACATTCGAAGTGCCGGACGAGCTGCGCTGCCACGTGCTGATCCATGGCAGCATCCGAGACGACGTGGACGTGCTGCTGCGGCCTGCGGAAGTGAAAGAGATCATGCGCTTAGATATACAAGATCTCAAATGTGTTGTGTGCAATTTGTTCTTGAGTTGGGAGGATTTGTATGCGCACTTGGAGGAGCATGGTGTTCCGGTGGCTGAGCTGTCGAAGAAAAGAATTGTGCCTTTCGATCTGGTGCCATATAAATATAAGTGTGTGTTTTGTGATGTGAGCGAGAGTAGATACATGAAGCTGGAGGTGCATATGTCTGTGCATTTTGATAATTACATATGCGATGACTGCGGACACAGTTTTATGACTTACTCCAAGCTGAAGACGCACGAATATCAAGAGAAACAGAAGAGGCTGGATTTCAAATGTGAAATGTGCGAAGAGATGATTATCGGCCGAACAAACTTCGAAAAGCACATGGCGACGGCTCACAGCTCACCGATAAAGTTTCCCTGTAAGCATTGCAATGAGAAATTCAAAGATCAGTATCGGAGGCATCTACATATGGTCGAGAAGCACAAGCACAAATTGGTGCCTATTAAGTGCGAGGATTGCGACAAGGAGTTCCTTTGGAAGGGCTTTTACTTGCAGCACTACAGGAAGGTGCATCTGAATGAACAGAAGTACGAGTGCGGGGTGTGCGGAAAAAGGTTCTTCGCCACGCATTCGTATAAGAAGCATTTGATGACGCACAGGAAGAAGCGGGTTCAGTGCGAACAGTGCTCCAGCCTGTTCACTGATGAGTATTCATTTGAAATTCACACGTGCGTCAGTGATCCAAATATACACGGTGTACTGGTCGAGGAGGAGTTAGTGGCTTCTCAAAGTGTTAGTTGA
- Protein Sequence
- MSYKICCVPGCNVRSGEGIQMHTFPNPEKDYRRFTKWVEAIRGEVLKMDSMSVYKRRRVCRRHFSERFHYESKIVKYSVPELHLSQKDSEEDAVIADKPSAGEDPDEFDEPMIEERLDEESIAFDEPVMESDHEVSYLQVCRCCLGENELENLWDVHTYGNHREVYGRILKYCFGIELVQMKNDRICKECIRSLHEANAFKNVVLNVQEQLTGVNLRDAKKNKSTVIEFINRFQDELEALENAEKANIERNMEEENYPTEYLESDLELGGEEVVQELRPVEKSREKSTLPSSQPRPKIRPKAVQPRSKSNFKIVKVVKRRVLPSRETLIRAVRAVKEGKMTLSAAKKLYDINGYCLRKIIESDIDLENIDLSLLTARKDKIDSVEMLKMSTDFVKQGKLTKVEAASLFNIPLSTLDYRISKGFLEDRSDQLIDTERIDRNGVTIVEVDDKVSRDPDRFTRADRLRLEQDVKMILACTNATPYLVLREKFVCGYCNDTFEVPDELRCHVLIHGSIRDDVDVLLRPAEVKEIMRLDIQDLKCVVCNLFLSWEDLYAHLEEHGVPVAELSKKRIVPFDLVPYKYKCVFCDVSESRYMKLEVHMSVHFDNYICDDCGHSFMTYSKLKTHEYQEKQKRLDFKCEMCEEMIIGRTNFEKHMATAHSSPIKFPCKHCNEKFKDQYRRHLHMVEKHKHKLVPIKCEDCDKEFLWKGFYLQHYRKVHLNEQKYECGVCGKRFFATHSYKKHLMTHRKKRVQCEQCSSLFTDEYSFEIHTCVSDPNIHGVLVEEELVASQSVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01453700;
- 90% Identity
- iTF_01453700;
- 80% Identity
- iTF_01453700;